| Chain sequence(s) |
A: MAQVQLLESGGGLVQPGGSLRLSCAASGVTITDEDMTRVRQAPGKGLEWVSSILNTGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVHEKAADMNFWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:54)
[INFO] Main: Simulation completed successfully. (00:00:54)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8022 | |
| 2 | A | A | -0.0762 | |
| 3 | Q | A | -0.9370 | |
| 4 | V | A | -0.1164 | |
| 5 | Q | A | -0.3779 | |
| 6 | L | A | 0.0000 | |
| 7 | L | A | 0.9569 | |
| 8 | E | A | 0.2506 | |
| 9 | S | A | -0.3506 | |
| 10 | G | A | -0.6499 | |
| 11 | G | A | 0.1262 | |
| 12 | G | A | 0.7017 | |
| 13 | L | A | 1.4141 | |
| 14 | V | A | -0.1263 | |
| 15 | Q | A | -1.4508 | |
| 16 | P | A | -1.8235 | |
| 17 | G | A | -1.5650 | |
| 18 | G | A | -1.0504 | |
| 19 | S | A | -1.3657 | |
| 20 | L | A | -0.9724 | |
| 21 | R | A | -2.2461 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.5302 | |
| 24 | C | A | 0.0000 | |
| 25 | A | A | -0.1058 | |
| 26 | A | A | 0.0000 | |
| 27 | S | A | -0.2639 | |
| 28 | G | A | -0.3312 | |
| 29 | V | A | -0.3017 | |
| 30 | T | A | -0.9343 | |
| 31 | I | A | 0.0000 | |
| 32 | T | A | -1.4655 | |
| 33 | D | A | -2.3165 | |
| 34 | E | A | 0.0000 | |
| 35 | D | A | -0.9198 | |
| 36 | M | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | -0.4588 | |
| 42 | A | A | -1.0540 | |
| 43 | P | A | -1.3161 | |
| 44 | G | A | -1.5859 | |
| 45 | K | A | -2.1605 | |
| 46 | G | A | -1.0039 | |
| 47 | L | A | 0.4607 | |
| 48 | E | A | -0.4525 | |
| 49 | W | A | 0.2255 | |
| 50 | V | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | S | A | 0.4516 | |
| 53 | I | A | 0.0000 | |
| 54 | L | A | -0.4752 | |
| 55 | N | A | -1.2586 | |
| 56 | T | A | -0.7243 | |
| 57 | G | A | -1.1206 | |
| 58 | G | A | -0.7140 | |
| 59 | S | A | -0.1791 | |
| 60 | T | A | 0.3008 | |
| 61 | Y | A | 0.7276 | |
| 62 | Y | A | -0.3304 | |
| 63 | A | A | -1.1262 | |
| 64 | D | A | -2.2744 | |
| 65 | S | A | -1.7026 | |
| 66 | V | A | 0.0000 | |
| 67 | K | A | -2.4705 | |
| 68 | G | A | -1.7525 | |
| 69 | R | A | -1.3780 | |
| 70 | F | A | 0.0000 | |
| 71 | T | A | -0.8566 | |
| 72 | I | A | 0.0000 | |
| 73 | S | A | -0.6238 | |
| 74 | R | A | -1.2246 | |
| 75 | D | A | -1.9685 | |
| 76 | N | A | -2.6096 | |
| 77 | S | A | -1.9608 | |
| 78 | K | A | -2.5601 | |
| 79 | N | A | -1.8419 | |
| 80 | T | A | -1.1471 | |
| 81 | L | A | 0.0000 | |
| 82 | Y | A | -0.7551 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.5645 | |
| 85 | M | A | 0.0000 | |
| 86 | N | A | -1.5065 | |
| 87 | S | A | -1.4032 | |
| 88 | L | A | 0.0000 | |
| 89 | R | A | -2.9503 | |
| 90 | A | A | -2.0494 | |
| 91 | E | A | -2.4892 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | -0.4793 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.9568 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.4679 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | A | A | 0.0000 | |
| 101 | V | A | -0.9271 | |
| 102 | H | A | -2.1895 | |
| 103 | E | A | -3.1350 | |
| 104 | K | A | -3.0053 | |
| 105 | A | A | -1.9029 | |
| 106 | A | A | -1.4936 | |
| 107 | D | A | -1.9964 | |
| 108 | M | A | -0.3096 | |
| 109 | N | A | -0.2901 | |
| 110 | F | A | 0.4764 | |
| 111 | W | A | 0.7743 | |
| 112 | G | A | 0.1078 | |
| 113 | Q | A | -0.6144 | |
| 114 | G | A | 0.0000 | |
| 115 | T | A | 0.6072 | |
| 116 | L | A | 1.6171 | |
| 117 | V | A | 0.0000 | |
| 118 | T | A | 0.3649 | |
| 119 | V | A | 0.0000 | |
| 120 | S | A | -0.6947 | |
| 121 | S | A | -0.6515 |