Project name: query_structure

Status: done

Started: 2026-03-16 23:57:36
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Chain sequence(s) A: MAQVQLLESGGGLVQPGGSLRLSCAASGVTITDEDMTRVRQAPGKGLEWVSSILNTGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAVHEKAADMNFWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:54)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:54)
Show buried residues

Minimal score value
-3.135
Maximal score value
1.6171
Average score
-0.6382
Total score value
-77.2255

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8022
2 A A -0.0762
3 Q A -0.9370
4 V A -0.1164
5 Q A -0.3779
6 L A 0.0000
7 L A 0.9569
8 E A 0.2506
9 S A -0.3506
10 G A -0.6499
11 G A 0.1262
12 G A 0.7017
13 L A 1.4141
14 V A -0.1263
15 Q A -1.4508
16 P A -1.8235
17 G A -1.5650
18 G A -1.0504
19 S A -1.3657
20 L A -0.9724
21 R A -2.2461
22 L A 0.0000
23 S A -0.5302
24 C A 0.0000
25 A A -0.1058
26 A A 0.0000
27 S A -0.2639
28 G A -0.3312
29 V A -0.3017
30 T A -0.9343
31 I A 0.0000
32 T A -1.4655
33 D A -2.3165
34 E A 0.0000
35 D A -0.9198
36 M A 0.0000
37 T A 0.0000
38 R A 0.0000
39 V A 0.0000
40 R A 0.0000
41 Q A -0.4588
42 A A -1.0540
43 P A -1.3161
44 G A -1.5859
45 K A -2.1605
46 G A -1.0039
47 L A 0.4607
48 E A -0.4525
49 W A 0.2255
50 V A 0.0000
51 S A 0.0000
52 S A 0.4516
53 I A 0.0000
54 L A -0.4752
55 N A -1.2586
56 T A -0.7243
57 G A -1.1206
58 G A -0.7140
59 S A -0.1791
60 T A 0.3008
61 Y A 0.7276
62 Y A -0.3304
63 A A -1.1262
64 D A -2.2744
65 S A -1.7026
66 V A 0.0000
67 K A -2.4705
68 G A -1.7525
69 R A -1.3780
70 F A 0.0000
71 T A -0.8566
72 I A 0.0000
73 S A -0.6238
74 R A -1.2246
75 D A -1.9685
76 N A -2.6096
77 S A -1.9608
78 K A -2.5601
79 N A -1.8419
80 T A -1.1471
81 L A 0.0000
82 Y A -0.7551
83 L A 0.0000
84 Q A -1.5645
85 M A 0.0000
86 N A -1.5065
87 S A -1.4032
88 L A 0.0000
89 R A -2.9503
90 A A -2.0494
91 E A -2.4892
92 D A 0.0000
93 T A -0.4793
94 A A 0.0000
95 V A 0.9568
96 Y A 0.0000
97 Y A 0.4679
98 C A 0.0000
99 A A 0.0000
100 A A 0.0000
101 V A -0.9271
102 H A -2.1895
103 E A -3.1350
104 K A -3.0053
105 A A -1.9029
106 A A -1.4936
107 D A -1.9964
108 M A -0.3096
109 N A -0.2901
110 F A 0.4764
111 W A 0.7743
112 G A 0.1078
113 Q A -0.6144
114 G A 0.0000
115 T A 0.6072
116 L A 1.6171
117 V A 0.0000
118 T A 0.3649
119 V A 0.0000
120 S A -0.6947
121 S A -0.6515
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Laboratory of Theory of Biopolymers 2018