Project name: dd756462c4addc7

Status: done

Started: 2024-12-07 04:56:13
Settings
Chain sequence(s) A: NKTKVIGIGINLEELSPEKIEKKIEEKLEEIDKEYAALKAEGVKHIRFNINIDINDANAENALYALEKLAYRCKELGVDVRLSINLNTDAETTDKVLERLLEIALEFDNVELSVHVNYADAGLVALDKVLEFAEKGIKVGLTITVSYAEDAPAVIEKTIETVKELREKGITGQHIIIVITCELTEEQLQLLRELIEEAKKALEASGKGNSVLVICEGPSKGAKELNEESAKMAQEGSGPYSGSGSG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:25)
Show buried residues

Minimal score value
-4.5407
Maximal score value
0.9144
Average score
-1.3662
Total score value
-336.0893

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 N A -2.6401
2 K A -2.8264
3 T A -2.2786
4 K A -1.6817
5 V A -0.3536
6 I A -0.1720
7 G A -0.6321
8 I A 0.0000
9 G A -1.2819
10 I A 0.0000
11 N A -2.1169
12 L A 0.0000
13 E A -2.4836
14 E A -2.5319
15 L A -2.0430
16 S A -1.7929
17 P A -2.3363
18 E A -3.3390
19 K A -3.4719
20 I A 0.0000
21 E A -3.9011
22 K A -4.4545
23 K A -3.5878
24 I A 0.0000
25 E A -4.5407
26 E A -4.3470
27 K A -3.4069
28 L A -3.0139
29 E A -4.0889
30 E A -3.5099
31 I A 0.0000
32 D A -2.3875
33 K A -3.1650
34 E A -2.2486
35 Y A -1.7012
36 A A -1.6886
37 A A -1.5953
38 L A 0.0000
39 K A -2.8776
40 A A -1.7125
41 E A -2.6259
42 G A -2.2608
43 V A -2.5617
44 K A -3.1498
45 H A -2.8690
46 I A 0.0000
47 R A -1.5268
48 F A 0.0000
49 N A -1.1596
50 I A 0.0000
51 N A -1.5708
52 I A 0.0000
53 D A -1.7486
54 I A 0.0000
55 N A -2.0523
56 D A -2.4859
57 A A -1.6418
58 N A 0.0000
59 A A 0.0000
60 E A -2.3672
61 N A -1.5413
62 A A 0.0000
63 L A 0.0000
64 Y A -0.6887
65 A A 0.0000
66 L A 0.0000
67 E A -0.7266
68 K A -1.1686
69 L A 0.0000
70 A A 0.0000
71 Y A -1.2681
72 R A -1.7310
73 C A 0.0000
74 K A -2.9922
75 E A -2.4305
76 L A -1.4926
77 G A -1.7902
78 V A -2.1162
79 D A -3.0071
80 V A 0.0000
81 R A -1.8420
82 L A 0.0000
83 S A 0.0000
84 I A 0.0000
85 N A -1.1833
86 L A 0.0000
87 N A -1.6210
88 T A 0.0000
89 D A -2.3945
90 A A -2.1621
91 E A -2.9936
92 T A -2.7695
93 T A 0.0000
94 D A -2.8169
95 K A -2.8908
96 V A 0.0000
97 L A 0.0000
98 E A -3.1334
99 R A -2.4786
100 L A 0.0000
101 L A 0.0000
102 E A -1.9114
103 I A 0.0000
104 A A 0.0000
105 L A -0.8315
106 E A -2.0357
107 F A -2.2060
108 D A -2.8434
109 N A -3.1647
110 V A -2.5149
111 E A -2.5303
112 L A 0.0000
113 S A -0.9901
114 V A 0.0000
115 H A -0.6231
116 V A 0.0000
117 N A -0.6263
118 Y A -0.1634
119 A A 0.0000
120 D A -1.5910
121 A A 0.0000
122 G A 0.0000
123 L A -0.6450
124 V A -1.1046
125 A A 0.0000
126 L A 0.0000
127 D A -2.1735
128 K A 0.0000
129 V A 0.0000
130 L A -1.8525
131 E A -2.6305
132 F A 0.0000
133 A A 0.0000
134 E A -3.3093
135 K A -2.8177
136 G A -2.2992
137 I A 0.0000
138 K A -2.2617
139 V A 0.0000
140 G A -0.7355
141 L A 0.0000
142 T A -0.0287
143 I A 0.0000
144 T A 0.3709
145 V A 0.0000
146 S A -0.1229
147 Y A 0.3158
148 A A -0.9213
149 E A -1.7237
150 D A -1.2556
151 A A 0.0000
152 P A -1.3166
153 A A -1.2132
154 V A 0.0000
155 I A 0.0000
156 E A -2.1186
157 K A -2.1549
158 T A 0.0000
159 I A -2.0252
160 E A -3.0456
161 T A 0.0000
162 V A 0.0000
163 K A -2.9781
164 E A -2.7256
165 L A 0.0000
166 R A -2.9466
167 E A -3.1970
168 K A -2.9103
169 G A -2.0526
170 I A -1.4540
171 T A -1.0604
172 G A -0.9395
173 Q A 0.0000
174 H A -0.4838
175 I A 0.0000
176 I A 0.6605
177 I A 0.0000
178 V A 0.1926
179 I A 0.0000
180 T A -0.7912
181 C A -1.1272
182 E A -2.4121
183 L A 0.0000
184 T A -2.4368
185 E A -3.3221
186 E A -3.0644
187 Q A -2.4115
188 L A 0.0000
189 Q A -2.4030
190 L A -2.0260
191 L A 0.0000
192 R A -3.1049
193 E A -2.6641
194 L A 0.0000
195 I A 0.0000
196 E A -3.2151
197 E A 0.0000
198 A A 0.0000
199 K A -3.0105
200 K A -3.2880
201 A A 0.0000
202 L A -2.5618
203 E A -3.1406
204 A A -2.0787
205 S A -1.5939
206 G A -2.0407
207 K A -2.1989
208 G A -1.3480
209 N A 0.0000
210 S A -0.7804
211 V A 0.0000
212 L A 0.0581
213 V A 0.0000
214 I A -0.1802
215 C A 0.0000
216 E A -2.2308
217 G A -1.8195
218 P A -1.9023
219 S A 0.0000
220 K A -2.9175
221 G A -2.3879
222 A A 0.0000
223 K A -3.8349
224 E A -3.9160
225 L A 0.0000
226 N A -2.9562
227 E A -3.9384
228 E A -3.5945
229 S A 0.0000
230 A A -2.4544
231 K A -3.4162
232 M A 0.0000
233 A A -1.8633
234 Q A -2.7531
235 E A -3.3922
236 G A 0.0000
237 S A -1.2498
238 G A -0.7592
239 P A 0.0786
240 Y A 0.9144
241 S A -0.2357
242 G A -0.6885
243 S A -0.6748
244 G A -0.9642
245 S A -0.7994
246 G A -0.7279
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Laboratory of Theory of Biopolymers 2018