| Chain sequence(s) |
A: DSATHIKFSKRDEDGKELAGATMELRRDSSGKKTIISTWISDGQVKDFYLYPGKYTFVETAAPDGYEEVVATAITFTTVNEEQGQVTVN
C: DSATHIKFSKRDEDGKELAGATMELRDSSGKKTIISTTWISDGQVKDFYLYPGKKYTFVETAAPDDGYEVVATAITFTVNEQGQVTTVNG B: AHIVMVDAYKPT D: AHIVMVVDAYKKPT input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:09)
[INFO] Main: Simulation completed successfully. (00:03:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 22 | D | A | -2.3437 | |
| 23 | S | A | -1.1006 | |
| 24 | A | A | 0.1076 | |
| 25 | T | A | -0.4491 | |
| 26 | H | A | -0.4038 | |
| 27 | I | A | 0.0000 | |
| 28 | K | A | -1.4283 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | 0.0000 | |
| 31 | K | A | 0.0000 | |
| 32 | R | A | -1.4695 | |
| 33 | D | A | 0.0000 | |
| 34 | E | A | -2.7446 | |
| 35 | D | A | -3.2175 | |
| 36 | G | A | -2.4488 | |
| 37 | K | A | -3.0635 | |
| 38 | E | A | -2.1700 | |
| 39 | L | A | -1.5349 | |
| 40 | A | A | -1.4968 | |
| 41 | G | A | -0.8112 | |
| 42 | A | A | 0.0000 | |
| 43 | T | A | 0.0000 | |
| 44 | M | A | 0.0000 | |
| 45 | E | A | 0.0000 | |
| 46 | L | A | 0.0000 | |
| 47 | R | A | -1.2375 | |
| 48 | D | A | -1.5895 | |
| 49 | S | A | -1.5248 | |
| 50 | S | A | -1.2983 | |
| 51 | G | A | -1.6176 | |
| 52 | K | A | -2.1257 | |
| 53 | T | A | -0.7252 | |
| 54 | I | A | 0.2094 | |
| 55 | S | A | 0.0343 | |
| 56 | T | A | 0.1471 | |
| 57 | W | A | 0.0000 | |
| 58 | I | A | -0.2579 | |
| 59 | S | A | -1.1863 | |
| 60 | D | A | -2.5523 | |
| 61 | G | A | -2.0794 | |
| 62 | Q | A | -2.2586 | |
| 63 | V | A | -1.3574 | |
| 64 | K | A | -1.9953 | |
| 65 | D | A | -1.7340 | |
| 66 | F | A | 0.0000 | |
| 67 | Y | A | 1.0118 | |
| 68 | L | A | 0.0000 | |
| 69 | Y | A | 0.4033 | |
| 70 | P | A | -1.2715 | |
| 71 | G | A | -1.0198 | |
| 72 | K | A | -1.5581 | |
| 73 | Y | A | -0.9734 | |
| 74 | T | A | -0.4528 | |
| 75 | F | A | 0.0000 | |
| 76 | V | A | 0.5141 | |
| 77 | E | A | 0.0000 | |
| 78 | T | A | 0.0000 | |
| 79 | A | A | 0.1749 | |
| 80 | A | A | -0.1910 | |
| 81 | P | A | -0.8163 | |
| 82 | D | A | -2.1040 | |
| 83 | G | A | -1.5573 | |
| 84 | Y | A | -1.0519 | |
| 85 | E | A | -1.1326 | |
| 86 | V | A | 0.9711 | |
| 87 | A | A | 0.6767 | |
| 88 | T | A | 0.3636 | |
| 89 | A | A | 0.4641 | |
| 90 | I | A | 0.4607 | |
| 91 | T | A | -0.2856 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -0.6935 | |
| 94 | V | A | 0.0000 | |
| 95 | N | A | -2.3892 | |
| 96 | E | A | -3.2036 | |
| 97 | Q | A | -2.9687 | |
| 98 | G | A | -2.1611 | |
| 99 | Q | A | -1.9812 | |
| 100 | V | A | -0.8030 | |
| 101 | T | A | -0.1527 | |
| 102 | V | A | 0.4830 | |
| 103 | N | A | -0.6877 | |
| 22 | D | C | -2.0389 | |
| 23 | S | C | -1.5367 | |
| 24 | A | C | -0.7126 | |
| 25 | T | C | -0.6308 | |
| 26 | H | C | -0.4706 | |
| 27 | I | C | 0.0000 | |
| 28 | K | C | -0.9670 | |
| 29 | F | C | 0.0000 | |
| 30 | S | C | 0.0000 | |
| 31 | K | C | 0.0000 | |
| 32 | R | C | -1.4682 | |
| 33 | D | C | 0.0000 | |
| 34 | E | C | -2.7910 | |
| 35 | D | C | -3.3311 | |
| 36 | G | C | -2.7193 | |
| 37 | K | C | -3.1464 | |
| 38 | E | C | -2.0996 | |
| 39 | L | C | -1.3813 | |
| 40 | A | C | -0.6581 | |
| 41 | G | C | -0.1450 | |
| 42 | A | C | 0.0000 | |
| 43 | T | C | 0.8599 | |
| 44 | M | C | 0.0000 | |
| 45 | E | C | -0.1162 | |
| 46 | L | C | 0.0000 | |
| 47 | R | C | -1.5270 | |
| 48 | D | C | -1.6128 | |
| 49 | S | C | -1.4187 | |
| 50 | S | C | -1.2505 | |
| 51 | G | C | -1.4527 | |
| 52 | K | C | -1.8514 | |
| 53 | T | C | -0.9898 | |
| 54 | I | C | -0.5714 | |
| 55 | S | C | 0.0000 | |
| 56 | T | C | 0.3385 | |
| 57 | W | C | 0.7818 | |
| 58 | I | C | 1.5709 | |
| 59 | S | C | 0.0000 | |
| 60 | D | C | -1.2140 | |
| 61 | G | C | -1.3617 | |
| 62 | Q | C | -1.2188 | |
| 63 | V | C | -0.2721 | |
| 64 | K | C | -0.3610 | |
| 65 | D | C | 0.0000 | |
| 66 | F | C | 0.0000 | |
| 67 | Y | C | 0.1431 | |
| 68 | L | C | 0.0000 | |
| 69 | Y | C | -0.0860 | |
| 70 | P | C | -1.0914 | |
| 71 | G | C | -0.9925 | |
| 72 | K | C | -1.3905 | |
| 73 | Y | C | 0.0000 | |
| 74 | T | C | -0.6180 | |
| 75 | F | C | 0.0000 | |
| 76 | V | C | 0.3773 | |
| 77 | E | C | 0.0000 | |
| 78 | T | C | 0.5602 | |
| 79 | A | C | 0.2422 | |
| 80 | A | C | -0.0758 | |
| 81 | P | C | -0.7224 | |
| 82 | D | C | -2.1354 | |
| 83 | G | C | -1.4192 | |
| 84 | Y | C | -0.9530 | |
| 85 | E | C | -1.0235 | |
| 86 | V | C | 1.1461 | |
| 87 | A | C | 0.8002 | |
| 88 | T | C | 0.4368 | |
| 89 | A | C | 0.4127 | |
| 90 | I | C | 0.5638 | |
| 91 | T | C | -0.1408 | |
| 92 | F | C | 0.0000 | |
| 93 | T | C | -0.5760 | |
| 94 | V | C | 0.0000 | |
| 95 | N | C | -2.1961 | |
| 96 | E | C | -2.8217 | |
| 97 | Q | C | -2.6898 | |
| 98 | G | C | -1.9750 | |
| 99 | Q | C | -1.9738 | |
| 100 | V | C | -0.6249 | |
| 101 | T | C | 0.2156 | |
| 102 | V | C | 1.2776 | |
| 103 | N | C | -0.1825 | |
| 104 | G | C | -0.2693 | |
| 111 | A | B | -0.8104 | |
| 112 | H | B | -0.9375 | |
| 113 | I | B | 0.0000 | |
| 114 | V | B | 1.0567 | |
| 115 | M | B | 0.0000 | |
| 116 | V | B | 0.2257 | |
| 117 | D | B | 0.0000 | |
| 118 | A | B | -0.6190 | |
| 119 | Y | B | -0.7079 | |
| 120 | K | B | -1.7895 | |
| 121 | P | B | -1.0252 | |
| 122 | T | B | -0.4612 | |
| 111 | A | D | -0.8399 | |
| 112 | H | D | -0.9781 | |
| 113 | I | D | 0.0000 | |
| 114 | V | D | 0.6420 | |
| 115 | M | D | 0.0000 | |
| 116 | V | D | 0.2766 | |
| 117 | D | D | 0.0000 | |
| 118 | A | D | -0.4675 | |
| 119 | Y | D | -0.5484 | |
| 120 | K | D | -1.4831 | |
| 121 | P | D | -0.8924 | |
| 122 | T | D | -0.3826 |