Project name: 1C10

Status: done

Started: 2025-08-15 03:30:44
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Chain sequence(s) H: SVKESGGGLFKPGGTLTLTCTASGFSLSSYGVSWVRQAPGNGLEWIGAIGFSGSGGSTYYASWAKSRSTITRNTNLNTVTLKMISLTAADTATYFCARDYAGGGDGYGNRGFDPWGPGTLVTVSS
L: ALVMTQTPASVEAAVGGTVTINCQASQNIYSNLAWYQQKPGQRPKLLIYDASDLASGVSTRFKGSGSGTQFTLTISDLESADAATYYCQQGYTSNNIDNNFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:33)
Show buried residues

Minimal score value
-2.8096
Maximal score value
1.4776
Average score
-0.4517
Total score value
-106.1394

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
3 S H -0.8273
4 V H 0.0000
5 K H -1.8722
6 E H 0.0000
7 S H -0.6567
8 G H -0.4640
9 G H 0.3173
11 G H 0.8831
12 L H 1.4236
13 F H 0.1379
14 K H -1.4644
15 P H -0.9475
16 G H -0.8355
17 G H -0.6552
18 T H -0.2860
19 L H 0.0000
20 T H -0.4637
21 L H 0.0000
22 T H -0.6459
23 C H 0.0000
24 T H -0.5985
25 A H 0.0000
26 S H -0.6923
27 G H -0.4673
28 F H -0.1051
29 S H -0.0606
30 L H 0.0000
35 S H -0.5079
36 S H -0.1412
37 Y H 0.1266
38 G H 0.0000
39 V H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.6930
45 A H -0.6950
46 P H -0.7739
47 G H -1.2549
48 N H -1.8468
49 G H -1.2497
50 L H 0.0000
51 E H -1.0343
52 W H 0.0000
53 I H 0.0000
54 G H 0.0000
55 A H 0.0000
56 I H 0.0000
57 G H -0.1753
58 F H -0.1578
59 S H -0.6238
60 G H -0.8021
61 S H -0.5587
62 G H -0.7682
63 G H -0.4982
64 S H -0.2753
65 T H 0.0482
66 Y H -0.3105
67 Y H -0.6420
68 A H 0.0000
69 S H -0.9665
70 W H -0.3769
71 A H 0.0000
72 K H -1.8209
74 S H -1.0208
75 R H -0.7093
76 S H 0.0000
77 T H -0.5328
78 I H 0.0000
79 T H -0.4562
80 R H -0.5794
81 N H -0.6947
82 T H -0.6654
83 N H -0.8487
84 L H 0.5626
85 N H -0.1630
86 T H -0.3746
87 V H 0.0000
88 T H -0.4643
89 L H 0.0000
90 K H -0.7174
91 M H 0.0000
92 I H 0.2649
93 S H -0.3390
94 L H 0.0000
95 T H -0.3307
96 A H -0.2324
97 A H 0.0675
98 D H 0.0000
99 T H 0.4180
100 A H 0.0000
101 T H 0.4604
102 Y H 0.0000
103 F H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.3280
107 D H 0.0000
108 Y H 0.3404
109 A H -0.1758
110 G H -0.8018
111 G H -1.0848
111A G H -1.1461
111B D H -1.1160
112C G H -0.3436
112B Y H 0.4056
112A G H 0.0000
112 N H 0.0000
113 R H -0.5759
114 G H 0.0000
115 F H 0.0000
116 D H -0.9521
117 P H -0.9988
118 W H 0.0000
119 G H 0.0000
120 P H -1.0785
121 G H -0.5792
122 T H 0.2164
123 L H 1.4776
124 V H 0.0000
125 T H 0.6610
126 V H 0.0000
127 S H -0.4162
128 S H -0.5680
1 A L -0.3252
2 L L 0.0000
3 V L 1.2081
4 M L 0.0000
5 T L -0.2672
6 Q L -0.5662
7 T L -0.5079
8 P L -0.4244
9 A L -0.4525
10 S L -1.1752
11 V L -1.3354
12 E L -2.8096
13 A L -1.2732
14 A L -0.9011
15 V L 0.3744
16 G L -0.9724
17 G L -0.8919
18 T L -0.8360
19 V L 0.0000
20 T L -0.2550
21 I L 0.0000
22 N L -0.9875
23 C L 0.0000
24 Q L -1.3839
25 A L 0.0000
26 S L -0.5877
27 Q L -1.4250
28 N L -1.2889
29 I L 0.0000
36 Y L 0.5680
37 S L 0.0775
38 N L 0.0832
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L -0.9546
44 Q L -1.4358
45 K L -1.5498
46 P L -1.2508
47 G L -1.5248
48 Q L -2.3598
49 R L -2.1855
50 P L 0.0000
51 K L -1.5509
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L -0.4972
56 D L -0.8060
57 A L 0.0000
65 S L -1.2696
66 D L -1.6977
67 L L -0.6410
68 A L 0.0000
69 S L -0.4526
70 G L -0.4107
71 V L -0.2245
72 S L -0.2902
74 T L -0.5602
75 R L -1.1217
76 F L 0.0000
77 K L -1.2733
78 G L 0.0000
79 S L -1.1319
80 G L -0.8826
83 S L -0.6699
84 G L -0.7209
85 T L -1.3604
86 Q L -1.8825
87 F L 0.0000
88 T L -0.9132
89 L L 0.0000
90 T L -0.5249
91 I L 0.0000
92 S L -1.2993
93 D L -2.0818
94 L L 0.0000
95 E L -1.4035
96 S L -0.7702
97 A L -0.3222
98 D L 0.0000
99 A L -1.1419
100 A L 0.0000
101 T L -0.9209
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 G L 0.0000
108 Y L 0.3961
109 T L -0.1793
110 S L -0.6296
112 N L -1.6940
113 N L -1.7156
114 I L 0.0000
115 D L -0.6580
116 N L 0.0000
117 N L -0.1291
118 F L 0.0000
119 G L 0.0000
120 G L -0.6942
121 G L -0.8436
122 T L 0.0000
123 K L -1.7052
124 L L 0.0000
125 E L -2.7834
126 I L -1.5059
127 K L -1.8623
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Laboratory of Theory of Biopolymers 2018