Chain sequence(s) |
H: SVKESGGGLFKPGGTLTLTCTASGFSLSSYGVSWVRQAPGNGLEWIGAIGFSGSGGSTYYASWAKSRSTITRNTNLNTVTLKMISLTAADTATYFCARDYAGGGDGYGNRGFDPWGPGTLVTVSS
L: ALVMTQTPASVEAAVGGTVTINCQASQNIYSNLAWYQQKPGQRPKLLIYDASDLASGVSTRFKGSGSGTQFTLTISDLESADAATYYCQQGYTSNNIDNNFGGGTKLEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:31) [INFO] Main: Simulation completed successfully. (00:01:33) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
3 | S | H | -0.8273 | |
4 | V | H | 0.0000 | |
5 | K | H | -1.8722 | |
6 | E | H | 0.0000 | |
7 | S | H | -0.6567 | |
8 | G | H | -0.4640 | |
9 | G | H | 0.3173 | |
11 | G | H | 0.8831 | |
12 | L | H | 1.4236 | |
13 | F | H | 0.1379 | |
14 | K | H | -1.4644 | |
15 | P | H | -0.9475 | |
16 | G | H | -0.8355 | |
17 | G | H | -0.6552 | |
18 | T | H | -0.2860 | |
19 | L | H | 0.0000 | |
20 | T | H | -0.4637 | |
21 | L | H | 0.0000 | |
22 | T | H | -0.6459 | |
23 | C | H | 0.0000 | |
24 | T | H | -0.5985 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.6923 | |
27 | G | H | -0.4673 | |
28 | F | H | -0.1051 | |
29 | S | H | -0.0606 | |
30 | L | H | 0.0000 | |
35 | S | H | -0.5079 | |
36 | S | H | -0.1412 | |
37 | Y | H | 0.1266 | |
38 | G | H | 0.0000 | |
39 | V | H | 0.0000 | |
40 | S | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.6930 | |
45 | A | H | -0.6950 | |
46 | P | H | -0.7739 | |
47 | G | H | -1.2549 | |
48 | N | H | -1.8468 | |
49 | G | H | -1.2497 | |
50 | L | H | 0.0000 | |
51 | E | H | -1.0343 | |
52 | W | H | 0.0000 | |
53 | I | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | A | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | G | H | -0.1753 | |
58 | F | H | -0.1578 | |
59 | S | H | -0.6238 | |
60 | G | H | -0.8021 | |
61 | S | H | -0.5587 | |
62 | G | H | -0.7682 | |
63 | G | H | -0.4982 | |
64 | S | H | -0.2753 | |
65 | T | H | 0.0482 | |
66 | Y | H | -0.3105 | |
67 | Y | H | -0.6420 | |
68 | A | H | 0.0000 | |
69 | S | H | -0.9665 | |
70 | W | H | -0.3769 | |
71 | A | H | 0.0000 | |
72 | K | H | -1.8209 | |
74 | S | H | -1.0208 | |
75 | R | H | -0.7093 | |
76 | S | H | 0.0000 | |
77 | T | H | -0.5328 | |
78 | I | H | 0.0000 | |
79 | T | H | -0.4562 | |
80 | R | H | -0.5794 | |
81 | N | H | -0.6947 | |
82 | T | H | -0.6654 | |
83 | N | H | -0.8487 | |
84 | L | H | 0.5626 | |
85 | N | H | -0.1630 | |
86 | T | H | -0.3746 | |
87 | V | H | 0.0000 | |
88 | T | H | -0.4643 | |
89 | L | H | 0.0000 | |
90 | K | H | -0.7174 | |
91 | M | H | 0.0000 | |
92 | I | H | 0.2649 | |
93 | S | H | -0.3390 | |
94 | L | H | 0.0000 | |
95 | T | H | -0.3307 | |
96 | A | H | -0.2324 | |
97 | A | H | 0.0675 | |
98 | D | H | 0.0000 | |
99 | T | H | 0.4180 | |
100 | A | H | 0.0000 | |
101 | T | H | 0.4604 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | -0.3280 | |
107 | D | H | 0.0000 | |
108 | Y | H | 0.3404 | |
109 | A | H | -0.1758 | |
110 | G | H | -0.8018 | |
111 | G | H | -1.0848 | |
111A | G | H | -1.1461 | |
111B | D | H | -1.1160 | |
112C | G | H | -0.3436 | |
112B | Y | H | 0.4056 | |
112A | G | H | 0.0000 | |
112 | N | H | 0.0000 | |
113 | R | H | -0.5759 | |
114 | G | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.9521 | |
117 | P | H | -0.9988 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | P | H | -1.0785 | |
121 | G | H | -0.5792 | |
122 | T | H | 0.2164 | |
123 | L | H | 1.4776 | |
124 | V | H | 0.0000 | |
125 | T | H | 0.6610 | |
126 | V | H | 0.0000 | |
127 | S | H | -0.4162 | |
128 | S | H | -0.5680 | |
1 | A | L | -0.3252 | |
2 | L | L | 0.0000 | |
3 | V | L | 1.2081 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.2672 | |
6 | Q | L | -0.5662 | |
7 | T | L | -0.5079 | |
8 | P | L | -0.4244 | |
9 | A | L | -0.4525 | |
10 | S | L | -1.1752 | |
11 | V | L | -1.3354 | |
12 | E | L | -2.8096 | |
13 | A | L | -1.2732 | |
14 | A | L | -0.9011 | |
15 | V | L | 0.3744 | |
16 | G | L | -0.9724 | |
17 | G | L | -0.8919 | |
18 | T | L | -0.8360 | |
19 | V | L | 0.0000 | |
20 | T | L | -0.2550 | |
21 | I | L | 0.0000 | |
22 | N | L | -0.9875 | |
23 | C | L | 0.0000 | |
24 | Q | L | -1.3839 | |
25 | A | L | 0.0000 | |
26 | S | L | -0.5877 | |
27 | Q | L | -1.4250 | |
28 | N | L | -1.2889 | |
29 | I | L | 0.0000 | |
36 | Y | L | 0.5680 | |
37 | S | L | 0.0775 | |
38 | N | L | 0.0832 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | -0.9546 | |
44 | Q | L | -1.4358 | |
45 | K | L | -1.5498 | |
46 | P | L | -1.2508 | |
47 | G | L | -1.5248 | |
48 | Q | L | -2.3598 | |
49 | R | L | -2.1855 | |
50 | P | L | 0.0000 | |
51 | K | L | -1.5509 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.4972 | |
56 | D | L | -0.8060 | |
57 | A | L | 0.0000 | |
65 | S | L | -1.2696 | |
66 | D | L | -1.6977 | |
67 | L | L | -0.6410 | |
68 | A | L | 0.0000 | |
69 | S | L | -0.4526 | |
70 | G | L | -0.4107 | |
71 | V | L | -0.2245 | |
72 | S | L | -0.2902 | |
74 | T | L | -0.5602 | |
75 | R | L | -1.1217 | |
76 | F | L | 0.0000 | |
77 | K | L | -1.2733 | |
78 | G | L | 0.0000 | |
79 | S | L | -1.1319 | |
80 | G | L | -0.8826 | |
83 | S | L | -0.6699 | |
84 | G | L | -0.7209 | |
85 | T | L | -1.3604 | |
86 | Q | L | -1.8825 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.9132 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5249 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.2993 | |
93 | D | L | -2.0818 | |
94 | L | L | 0.0000 | |
95 | E | L | -1.4035 | |
96 | S | L | -0.7702 | |
97 | A | L | -0.3222 | |
98 | D | L | 0.0000 | |
99 | A | L | -1.1419 | |
100 | A | L | 0.0000 | |
101 | T | L | -0.9209 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | G | L | 0.0000 | |
108 | Y | L | 0.3961 | |
109 | T | L | -0.1793 | |
110 | S | L | -0.6296 | |
112 | N | L | -1.6940 | |
113 | N | L | -1.7156 | |
114 | I | L | 0.0000 | |
115 | D | L | -0.6580 | |
116 | N | L | 0.0000 | |
117 | N | L | -0.1291 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.6942 | |
121 | G | L | -0.8436 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.7052 | |
124 | L | L | 0.0000 | |
125 | E | L | -2.7834 | |
126 | I | L | -1.5059 | |
127 | K | L | -1.8623 |