| Chain sequence(s) |
A: GIVEQCCGNICSLKQLEKYCNNEDKELCGSHLVDMLPDYCGERGFFYSPHK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:57)
[INFO] Main: Simulation completed successfully. (00:00:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0268 | |
| 2 | I | A | -0.8061 | |
| 3 | V | A | -1.0854 | |
| 4 | E | A | -2.6484 | |
| 5 | Q | A | -2.2088 | |
| 6 | C | A | 0.0000 | |
| 7 | C | A | -1.3389 | |
| 8 | G | A | -1.5753 | |
| 9 | N | A | -1.2567 | |
| 10 | I | A | 0.2563 | |
| 11 | C | A | 0.0000 | |
| 12 | S | A | 0.0000 | |
| 13 | L | A | -1.8013 | |
| 14 | K | A | -3.1587 | |
| 15 | Q | A | -2.4454 | |
| 16 | L | A | 0.0000 | |
| 17 | E | A | -3.2957 | |
| 18 | K | A | -2.8956 | |
| 19 | Y | A | -1.5268 | |
| 20 | C | A | -2.7210 | |
| 21 | N | A | -3.7758 | |
| 22 | N | A | -3.7886 | |
| 23 | E | A | -4.3241 | |
| 24 | D | A | -4.5821 | |
| 25 | K | A | -4.5117 | |
| 26 | E | A | -3.5393 | |
| 27 | L | A | -2.2438 | |
| 28 | C | A | -1.9582 | |
| 29 | G | A | 0.0000 | |
| 30 | S | A | -1.0051 | |
| 31 | H | A | -1.5844 | |
| 32 | L | A | 0.0000 | |
| 33 | V | A | -0.4481 | |
| 34 | D | A | -2.0020 | |
| 35 | M | A | -1.1399 | |
| 36 | L | A | 0.0000 | |
| 37 | P | A | -1.3126 | |
| 38 | D | A | -2.0163 | |
| 39 | Y | A | -0.6014 | |
| 40 | C | A | 0.0000 | |
| 41 | G | A | -2.0175 | |
| 42 | E | A | -2.8581 | |
| 43 | R | A | -2.4695 | |
| 44 | G | A | -1.2782 | |
| 45 | F | A | 0.3726 | |
| 46 | F | A | 1.9519 | |
| 47 | Y | A | 1.0387 | |
| 48 | S | A | 0.0000 | |
| 49 | P | A | -1.0635 | |
| 50 | H | A | -2.0616 | |
| 51 | K | A | -2.4202 |