Chain sequence(s) |
A: QVQLQESGGGSVQAGGSLRLSCAVRRPTDSRNCMAWFRQAPGEQREAVAGIDIYRITGYAESVKGRFTISQDNAKNTLFLLQMMNLKPTDTGIYFCAAEPKGGYYRGDLVPGQFTYWGRGTQVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:32) [INFO] Main: Simulation completed successfully. (00:01:33) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -2.0337 | |
2 | V | A | 0.0000 | |
3 | Q | A | -2.2512 | |
4 | L | A | 0.0000 | |
5 | Q | A | -1.6230 | |
6 | E | A | 0.0000 | |
7 | S | A | -1.0238 | |
8 | G | A | -1.2181 | |
9 | G | A | -1.1582 | |
10 | G | A | -0.9468 | |
11 | S | A | -0.7357 | |
12 | V | A | -0.8692 | |
13 | Q | A | -1.8098 | |
14 | A | A | -1.6573 | |
15 | G | A | -1.6657 | |
16 | G | A | -1.1801 | |
17 | S | A | -1.1581 | |
18 | L | A | -1.0613 | |
19 | R | A | -2.0853 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.9989 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.8647 | |
24 | V | A | 0.0000 | |
25 | R | A | -2.8461 | |
26 | R | A | -3.1060 | |
27 | P | A | -2.4234 | |
28 | T | A | -1.7026 | |
29 | D | A | -1.8381 | |
30 | S | A | -1.7056 | |
31 | R | A | -2.4008 | |
32 | N | A | 0.0000 | |
33 | C | A | 0.0000 | |
34 | M | A | 0.0000 | |
35 | A | A | 0.0000 | |
36 | W | A | 0.0000 | |
37 | F | A | 0.0000 | |
38 | R | A | 0.0000 | |
39 | Q | A | -1.6216 | |
40 | A | A | -1.4688 | |
41 | P | A | -1.2523 | |
42 | G | A | -1.8166 | |
43 | E | A | -3.0294 | |
44 | Q | A | -2.7636 | |
45 | R | A | -1.8649 | |
46 | E | A | -1.5449 | |
47 | A | A | -0.6988 | |
48 | V | A | 0.0000 | |
49 | A | A | 0.0000 | |
50 | G | A | 0.0000 | |
51 | I | A | 0.0000 | |
52 | D | A | 0.0000 | |
53 | I | A | 0.2118 | |
54 | Y | A | 1.1063 | |
55 | R | A | -0.1293 | |
56 | I | A | 1.3014 | |
57 | T | A | 0.5290 | |
58 | G | A | -0.7404 | |
59 | Y | A | -1.0721 | |
60 | A | A | -1.6936 | |
61 | E | A | -2.5204 | |
62 | S | A | -1.6080 | |
63 | V | A | 0.0000 | |
64 | K | A | -2.6177 | |
65 | G | A | -1.7430 | |
66 | R | A | -1.5121 | |
67 | F | A | 0.0000 | |
68 | T | A | -0.7378 | |
69 | I | A | 0.0000 | |
70 | S | A | -0.7752 | |
71 | Q | A | -1.4814 | |
72 | D | A | -2.1226 | |
73 | N | A | -1.6316 | |
74 | A | A | -1.2876 | |
75 | K | A | -2.2389 | |
76 | N | A | 0.0000 | |
77 | T | A | -1.3686 | |
78 | L | A | -0.8543 | |
79 | F | A | 0.0000 | |
80 | L | A | 0.0000 | |
81 | L | A | 0.0000 | |
82 | Q | A | -1.1545 | |
83 | M | A | 0.0000 | |
84 | M | A | -1.0213 | |
85 | N | A | -1.8793 | |
86 | L | A | 0.0000 | |
87 | K | A | -1.9677 | |
88 | P | A | -1.0900 | |
89 | T | A | -0.6019 | |
90 | D | A | 0.0000 | |
91 | T | A | -0.5568 | |
92 | G | A | 0.0000 | |
93 | I | A | -0.3574 | |
94 | Y | A | 0.0000 | |
95 | F | A | -0.5414 | |
96 | C | A | 0.0000 | |
97 | A | A | 0.0000 | |
98 | A | A | 0.0000 | |
99 | E | A | -1.2640 | |
100 | P | A | -1.6282 | |
101 | K | A | -2.3488 | |
102 | G | A | -1.2818 | |
103 | G | A | -1.1089 | |
104 | Y | A | 0.2549 | |
105 | Y | A | -0.6519 | |
106 | R | A | -2.1811 | |
107 | G | A | -1.9029 | |
108 | D | A | -1.9465 | |
109 | L | A | 0.0000 | |
110 | V | A | 0.0350 | |
111 | P | A | -0.4500 | |
112 | G | A | -0.6653 | |
113 | Q | A | -1.2990 | |
114 | F | A | 0.0000 | |
115 | T | A | -0.4730 | |
116 | Y | A | -0.0576 | |
117 | W | A | -0.2259 | |
118 | G | A | -1.0971 | |
119 | R | A | -1.9466 | |
120 | G | A | 0.0000 | |
121 | T | A | 0.0000 | |
122 | Q | A | -1.2138 | |
123 | V | A | 0.0000 | |
124 | T | A | -0.7887 | |
125 | V | A | 0.0000 | |
126 | S | A | -1.0741 | |
127 | S | A | -0.9218 |