Project name: mehdi_b_mav_dms [mutate: VP33A]

Status: done

Started: 2026-05-13 23:42:17
Settings
Chain sequence(s) A: EVQLVESGGGLVQPGGSLRLSCAASGRTFSSYVMGWLRQAPGKEREFVAAINWGGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRPEDTAVYYCNAVSIGAGNDYWGQGTLVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues VP33A
Energy difference between WT (input) and mutated protein (by FoldX) 0.947123 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:08)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:08)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:09)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:09)
[INFO]       FoldX:    Building mutant model                                                       (00:00:45)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:50)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:20)
Show buried residues

Minimal score value
-3.8429
Maximal score value
1.659
Average score
-0.7363
Total score value
-86.8857

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E A -2.5096
2 V A -1.7544
3 Q A -1.6340
4 L A 0.0000
5 V A 0.9385
6 E A 0.0000
7 S A -0.1964
8 G A -0.6372
9 G A 0.1009
10 G A 0.6664
11 L A 1.3144
12 V A 0.0000
13 Q A -1.5382
14 P A -1.8585
15 G A -1.5712
16 G A -1.0281
17 S A -1.3187
18 L A -0.9268
19 R A -2.1179
20 L A 0.0000
21 S A -0.3728
22 C A 0.0000
23 A A -0.0965
24 A A 0.0000
25 S A -1.6825
26 G A -2.3037
27 R A -2.6171
28 T A -1.4419
29 F A 0.0000
30 S A -0.9726
31 S A 0.2130
32 Y A 0.3581
33 P A 0.3442 mutated: VP33A
34 M A 0.0000
35 G A 0.0000
36 W A 0.0000
37 L A -0.3943
38 R A -1.2143
39 Q A -2.0233
40 A A -1.8987
41 P A -1.4701
42 G A -1.9907
43 K A -3.5291
44 E A -3.8429
45 R A -3.3000
46 E A -2.7607
47 F A -0.6311
48 V A 0.0000
49 A A 0.0000
50 A A 0.4795
51 I A 0.0000
52 N A -0.1268
53 W A 0.3610
54 G A -0.7860
55 G A -1.0967
56 G A -0.7901
57 S A -0.3064
58 T A 0.2207
59 Y A 0.6080
60 Y A -0.3111
61 A A -1.1894
62 D A -2.3292
63 S A -1.7121
64 V A 0.0000
65 K A -2.5401
66 G A -1.8228
67 R A -1.6291
68 F A 0.0000
69 T A -0.7716
70 I A 0.0000
71 S A -0.5658
72 R A -1.2449
73 D A -1.8620
74 N A -2.4650
75 S A -1.9255
76 K A -2.4924
77 N A -2.1616
78 T A 0.0000
79 L A 0.0000
80 Y A -0.5387
81 L A 0.0000
82 Q A -1.2722
83 M A 0.0000
84 N A -1.5086
85 S A -1.4186
86 L A 0.0000
87 R A -3.0223
88 P A -2.2406
89 E A -2.5454
90 D A 0.0000
91 T A -0.6172
92 A A 0.0000
93 V A 0.4664
94 Y A 0.0000
95 Y A 0.0766
96 C A 0.0000
97 N A -0.1025
98 A A 0.0000
99 V A 0.1970
100 S A 0.4942
101 I A 1.5887
102 G A 0.3342
103 A A -0.2578
104 G A -0.8234
105 N A -1.3102
106 D A -1.5885
107 Y A -0.7541
108 W A -0.0068
109 G A -0.0631
110 Q A -0.8455
111 G A 0.0000
112 T A 0.5821
113 L A 1.6590
114 V A 0.0000
115 T A 0.2047
116 V A 0.0000
117 S A -0.8955
118 S A -0.5204
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Laboratory of Theory of Biopolymers 2018