Project name: query_structure

Status: done

Started: 2026-03-16 23:44:55
Settings
Chain sequence(s) A: GTCRTLGCTCLPLRCKAPRMVRCGETCWG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-2.6993
Maximal score value
0.8298
Average score
-0.7518
Total score value
-21.8033

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3976
2 T A -0.1689
3 C A -1.0856
4 R A -1.6125
5 T A -0.6069
6 L A 0.8298
7 G A -0.1820
8 C A -0.6021
9 T A -0.5505
10 C A -0.4605
11 L A 0.1417
12 P A 0.2893
13 L A 0.3839
14 R A -1.7317
15 C A 0.0000
16 K A -1.8498
17 A A -1.1014
18 P A -1.1665
19 R A -1.6678
20 M A 0.0515
21 V A -0.0643
22 R A -1.7950
23 C A -1.7044
24 G A -2.2936
25 E A -2.6993
26 T A -1.2844
27 C A -0.5197
28 W A 0.1967
29 G A -0.1517
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Laboratory of Theory of Biopolymers 2018