Project name: 8b1n_normal

Status: done

Started: 2026-06-01 06:39:54
Settings
Chain sequence(s) A: GPHMKRRYNVITIFPEEMINEIFKYGVLSKGIDIGLFRVNNPINLRDYTEDKHKTVDDYQYGGGHGLVMKPEPIYKAIADLKSKKDTHVVFLDPRGEQFTQKTAERLYNYDDITFVCGRYEGIDDRVRELMADEMISIGDFVITGGELAAVTIIDAVARLIPGVLGDENSPNEESFTTGLLEYPHFTRPAEFMGKKVPEVLISGNHEEIRRWRLTESIKTTLQNRPDMILRRKSLSREEEQQILWSLTRGVQRKYNIYVALMHYPMRDKEGKVVTTSITNMDLHDDISRSSCRTFGVKNYFVVNPMMPAQREIASRVVRRHWIKGYGATYNENRKEAFEYTIITDSLASVIKSIEEKESGSPIIIATTARYQQKAISIEKLKEIADRPILLLFGTGWGFVDDILEFADYVLKPIHGVGDFNHLSVRSAVAIYLDRINRSFQE
B: HMKRYNVITIFPEMINEIFKYGVLSKGIDIGLFRVNPINLRDYTEDKHKTVDDYQYGGGHGLVMKPEPIYKAIADLKSKKDTHVVFLDPRGEQFTQKTAERLYNYDDITFVCGRYEGIDDRVRELMADEMISIGDFVITGGELAAVTIIDAVARLIPGVLGDENSPNEESFTTGLLEYPHFTRPAEFMGKKVPEVLISGNHEEIRRWRLTESIKTTLQNRPDMILRKSLSREEEQILWSLTRYNIYVALMHYPMRDKEGKVVTTSITNMDLHDISRSCRTFGVKNYFVVNPMPAQREIASRVVRHWIKYTIITDSLASSVIKSIEEKESGSPIIIATTARYQQKAISIEKLKEIADRPILLLFGTGWGFVDDILEFADYVLKPIHGVGDFNHLSVRSAVAIYLDRINRSFQ
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:19:09)
[INFO]       Main:     Simulation completed successfully.                                          (00:19:24)
Show buried residues

Minimal score value
-4.3318
Maximal score value
1.2403
Average score
-0.8104
Total score value
-683.1492

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
-2 G A -1.0746
-1 P A -0.8911
0 H A -1.2384
1 M A -0.7915
2 K A 0.0000
3 R A -1.4614
4 Y A 0.0000
5 N A 0.0000
6 V A 0.0000
7 I A 0.0000
8 T A 0.0000
9 I A 0.0000
10 F A -0.4392
11 P A -1.1498
12 E A -1.9992
13 M A 0.0000
14 I A 0.0000
15 N A -1.5799
16 E A -1.8412
17 I A 0.0000
18 F A 0.0000
19 K A -2.2172
20 Y A -1.1079
21 G A -0.4872
22 V A -0.6494
23 L A 0.0000
24 S A -1.5846
25 K A -1.8924
26 G A 0.0000
27 I A -1.1123
28 D A -1.6949
29 I A 0.6057
30 G A -0.1103
31 L A -0.1217
32 F A 0.0000
33 R A -1.8032
34 V A 0.0000
35 N A -1.0267
36 P A -0.8196
37 I A -0.7129
38 N A -1.5034
39 L A 0.0000
40 R A -2.3616
41 D A -2.8080
42 Y A -2.1597
43 T A -2.8665
44 E A -3.5055
45 D A -3.5893
46 K A -3.5409
47 H A -3.2017
48 K A -3.7978
49 T A -2.3662
50 V A 0.0000
51 D A -0.6827
52 D A -0.6082
53 Y A -0.2699
54 Q A 0.0000
55 Y A -0.2123
56 G A -0.6907
57 G A -0.9278
58 G A -1.4237
59 H A -1.8123
60 G A 0.0000
61 L A -0.5460
62 V A 0.0000
63 M A 0.0000
64 K A -0.7081
65 P A 0.0000
66 E A -0.8490
67 P A 0.0000
68 I A 0.0000
69 Y A -0.6462
70 K A -1.8611
71 A A 0.0000
72 I A 0.0000
73 A A -1.7041
74 D A -2.3463
75 L A 0.0000
76 K A -3.4369
77 S A -2.6011
78 K A -3.1361
79 K A -2.9096
80 D A -2.9937
81 T A -2.0412
82 H A -1.1939
83 V A 0.0000
84 V A 0.0000
85 F A 0.0000
86 L A 0.0000
87 D A -0.4899
88 P A -0.4138
89 R A 0.0000
90 G A 0.0000
91 E A -1.3940
92 Q A -0.9899
93 F A 0.0000
94 T A -1.1230
95 Q A 0.0000
96 K A -2.5496
97 T A 0.0000
98 A A 0.0000
99 E A -2.7341
100 R A -2.0513
101 L A 0.0000
102 Y A -1.3056
103 N A -1.6593
104 Y A -0.9688
105 D A -1.1946
106 D A -1.3596
107 I A 0.0000
108 T A 0.0000
109 F A 0.0000
110 V A 0.0000
111 C A 0.0000
112 G A -0.1011
113 R A 0.0000
114 Y A -0.1775
115 E A -0.3842
116 G A -0.0949
117 I A -0.0005
118 D A 0.0000
119 D A 0.0000
120 R A 0.0000
121 V A 0.0000
122 R A -1.2344
123 E A -2.0615
124 L A -0.5888
125 M A -0.7130
126 A A -1.3981
127 D A -2.1452
128 E A -1.5500
129 M A -0.7958
130 I A 0.0000
131 S A 0.0000
132 I A 0.0000
133 G A 0.0000
134 D A -0.5324
135 F A 0.0000
136 V A 0.0000
137 I A 0.2953
138 T A 0.0000
139 G A 0.0332
140 G A -0.0902
141 E A 0.0000
142 L A 0.0000
143 A A 0.0000
144 A A 0.0000
145 V A 0.0000
146 T A 0.0000
147 I A 0.0000
148 I A 0.0000
149 D A 0.0000
150 A A 0.0000
151 V A 0.0000
152 A A 0.0000
153 R A 0.0000
154 L A -0.3743
155 I A 0.0000
156 P A -0.4037
157 G A -0.5183
158 V A 0.0000
159 L A -0.7182
160 G A -1.4463
161 D A -2.3630
162 E A -1.4199
163 N A 0.0000
164 S A -1.6373
165 P A -1.2574
166 N A -2.1963
167 E A -2.5158
168 E A 0.0000
169 S A 0.0000
170 F A -0.5093
171 T A -1.2812
172 T A -0.8375
173 G A -0.8775
174 L A 0.0000
175 L A 0.0000
176 E A -0.6846
177 Y A -0.3022
178 P A -0.1173
179 H A 0.0000
180 F A 0.0000
181 T A 0.0000
182 R A -2.1243
183 P A -2.0220
184 A A -2.1074
185 E A -2.8232
186 F A -1.3813
187 M A -0.1617
188 G A -1.1342
189 K A -2.0846
190 K A -3.0456
191 V A 0.0000
192 P A -1.3498
193 E A -1.7163
194 V A -1.3841
195 L A 0.0000
196 I A 0.0386
197 S A -0.7369
198 G A -1.7709
199 N A -2.7679
200 H A -3.2746
201 E A -3.8286
202 E A -3.5223
203 I A -2.6110
204 R A -2.8238
205 R A -2.9392
206 W A -1.5420
207 R A -1.3893
208 L A -1.2087
209 T A -1.2620
210 E A -1.2736
211 S A 0.0000
212 I A 0.0000
213 K A -2.0494
214 T A -1.4453
215 T A 0.0000
216 L A -1.1871
217 Q A -1.9286
218 N A -1.8378
219 R A -1.3927
220 P A -1.3394
221 D A -1.3368
222 M A 0.0000
223 I A 0.0000
224 L A -0.8531
225 R A -2.2548
226 K A -1.2136
227 S A -0.7887
228 L A -0.7658
229 S A -1.0144
230 R A -1.7034
231 E A -1.8605
232 E A -1.2860
233 E A 0.0000
234 Q A -1.4168
235 I A 0.0000
236 L A 0.0000
237 W A 0.0000
238 S A -0.7018
239 L A -0.5129
240 T A -0.3405
241 R A -0.9412
242 G A -0.7331
243 V A 0.2250
244 Q A -1.9691
245 R A -2.8905
246 K A -3.3038
247 Y A -2.2022
248 N A -1.7533
249 I A 0.0000
250 Y A 0.0000
251 V A 0.0000
252 A A 0.0000
253 L A 0.0000
254 M A 0.0000
255 H A 0.0000
256 Y A 1.0280
257 P A 0.2095
258 M A 0.0000
259 R A -1.2112
260 D A -1.8764
261 K A -2.8756
262 E A -3.1743
263 G A -2.4650
264 K A -2.0703
265 V A 0.4267
266 V A 0.6917
267 T A 0.6789
268 T A 0.3209
269 S A -0.2229
270 I A -0.0603
271 T A -0.5662
272 N A -0.9529
273 M A -0.4022
274 D A 0.0000
275 L A 0.0000
276 H A -0.4287
277 D A 0.0000
278 I A 0.0000
279 S A 0.0000
280 R A -0.4072
281 S A 0.0000
282 C A 0.0000
283 R A 0.0000
284 T A 0.0000
285 F A 0.0000
286 G A -0.7560
287 V A 0.0000
288 K A -1.2260
289 N A -0.4430
290 Y A 0.0000
291 F A 0.0000
292 V A 0.0000
293 V A 0.0000
294 N A 0.0000
295 P A -0.1485
296 M A -0.0737
297 P A -0.6110
298 A A -0.4493
299 Q A -0.4562
300 R A -1.1290
301 E A -1.8008
302 I A -0.3802
303 A A 0.0000
304 S A -1.5288
305 R A -2.5211
306 V A -1.4370
307 V A -1.5144
308 R A -3.0988
309 H A -1.8440
310 W A -1.2542
311 I A -1.8238
312 K A -2.2740
313 G A -1.0715
314 Y A 0.7809
315 G A 0.0000
316 A A -0.2842
317 T A 0.4916
318 Y A 1.2403
319 N A 0.1679
320 E A -0.5133
321 N A -0.9423
322 R A -0.8055
323 K A -1.3310
324 E A 0.0000
325 A A 0.0000
326 F A 0.0000
327 E A -1.5291
328 Y A -0.4796
329 T A -0.0175
330 I A 0.5363
331 I A 0.1976
332 T A -0.3857
333 D A -0.7610
334 S A -0.1677
335 L A -0.1141
336 A A -0.4099
337 S A -0.7588
338 V A 0.0000
339 I A -1.0950
340 K A -2.4804
341 S A -1.9123
342 I A 0.0000
343 E A -2.5448
344 E A -3.3067
345 K A -2.9253
346 E A -2.1950
347 S A -1.8468
348 G A -1.5328
349 S A -1.2772
350 P A 0.0000
351 I A 0.0000
352 I A 0.0000
353 I A 0.0000
354 A A 0.0000
355 T A 0.0000
356 T A -0.2519
357 A A -0.2915
358 R A -0.4347
359 Y A 0.0663
360 Q A -1.4545
361 Q A -1.9753
362 K A -2.2716
363 A A -1.3441
364 I A -1.2468
365 S A -1.2782
366 I A 0.0000
367 E A -2.4445
368 K A -2.3059
369 L A 0.0000
370 K A -2.7286
371 E A -3.0547
372 I A -2.0082
373 A A 0.0000
374 D A -3.0410
375 R A -2.6344
376 P A 0.0000
377 I A 0.0000
378 L A 0.0000
379 L A 0.0000
380 L A 0.0000
381 F A 0.0000
382 G A 0.1486
383 T A 0.1253
384 G A -0.1896
385 W A 0.0271
386 G A -0.2119
387 F A 0.0000
388 V A 0.0000
389 D A -3.0712
390 D A -2.8690
391 I A 0.0000
392 L A 0.0000
393 E A -2.4284
394 F A -0.4442
395 A A -0.7932
396 D A -1.5115
397 Y A -1.1107
398 V A 0.0000
399 L A 0.0000
400 K A -1.5547
401 P A 0.0000
402 I A 0.0000
403 H A -0.5880
404 G A -0.3161
405 V A 0.4956
406 G A -0.7674
407 D A -1.7460
408 F A -0.8798
409 N A 0.0000
410 H A -1.3518
411 L A -0.6039
412 S A 0.0000
413 V A 0.0214
414 R A -0.0071
415 S A 0.0000
416 A A -0.0216
417 V A 0.0000
418 A A 0.0000
419 I A 0.0000
420 Y A 0.0000
421 L A 0.0000
422 D A 0.0000
423 R A -0.8325
424 I A 0.0000
425 N A -1.2676
426 R A -1.8488
427 S A 0.0000
428 F A -2.0374
429 Q A -2.3211
430 E A -2.5735
0 H B -1.0850
1 M B -0.8211
2 K B 0.0000
3 R B -1.3542
4 Y B 0.0000
5 N B 0.0000
6 V B 0.0000
7 I B 0.0000
8 T B 0.0000
9 I B -0.4819
10 F B -0.4379
11 P B -1.2022
12 E B -2.1338
13 M B 0.0000
14 I B 0.0000
15 N B -1.7313
16 E B -1.9572
17 I B 0.0000
18 F B 0.0000
19 K B -2.2198
20 Y B -1.0738
21 G B -0.4914
22 V B -0.4251
23 L B 0.0000
24 S B -1.5353
25 K B -1.8126
26 G B 0.0000
27 I B -0.9480
28 D B -1.6411
29 I B 0.6237
30 G B -0.1698
31 L B -0.2743
32 F B 0.0000
33 R B -1.8159
34 V B -0.9265
35 N B -0.8046
36 P B -0.7452
37 I B -0.6313
38 N B -1.5662
39 L B 0.0000
40 R B -2.4765
41 D B -2.9061
42 Y B -2.3290
43 T B -3.2201
44 E B -3.9434
45 D B -4.3318
46 K B -3.9645
47 H B -3.5599
48 K B -4.1994
49 T B -2.6366
50 V B 0.0000
51 D B -0.6141
52 D B -0.4298
53 Y B -0.1327
54 Q B -0.3102
55 Y B -0.2168
56 G B -0.8033
57 G B -0.9049
58 G B -1.3393
59 H B -1.7600
60 G B 0.0000
61 L B -0.2864
62 V B 0.0000
63 M B 0.0000
64 K B -0.6703
65 P B 0.0000
66 E B -0.8948
67 P B 0.0000
68 I B 0.0000
69 Y B -0.5262
70 K B -1.7546
71 A B 0.0000
72 I B 0.0000
73 A B -1.5801
74 D B -2.2203
75 L B -2.1977
76 K B -3.1401
77 S B -2.4515
78 K B -3.0308
79 K B -2.7931
80 D B -2.9142
81 T B 0.0000
82 H B -1.2352
83 V B 0.0000
84 V B 0.0000
85 F B 0.0000
86 L B 0.0000
87 D B -0.4830
88 P B -0.4203
89 R B 0.0000
90 G B 0.0000
91 E B -1.3902
92 Q B -1.0040
93 F B 0.0000
94 T B -1.1671
95 Q B 0.0000
96 K B -2.4513
97 T B 0.0000
98 A B 0.0000
99 E B -2.7121
100 R B -2.0106
101 L B 0.0000
102 Y B -1.2238
103 N B -1.6187
104 Y B -0.8853
105 D B -1.3638
106 D B 0.0000
107 I B 0.0000
108 T B 0.0000
109 F B 0.0000
110 V B 0.0000
111 C B 0.0000
112 G B -0.0437
113 R B 0.0000
114 Y B -0.0314
115 E B -0.3563
116 G B -0.1305
117 I B 0.0017
118 D B 0.0000
119 D B 0.0000
120 R B 0.0000
121 V B 0.0000
122 R B -1.2115
123 E B -2.0726
124 L B -0.6517
125 M B -0.7117
126 A B -1.3949
127 D B -2.1457
128 E B -1.5484
129 M B -0.7911
130 I B 0.0000
131 S B 0.0000
132 I B 0.0000
133 G B 0.0000
134 D B -0.5449
135 F B 0.0000
136 V B 0.0000
137 I B 0.3114
138 T B 0.0000
139 G B 0.0000
140 G B 0.0000
141 E B 0.0000
142 L B 0.0000
143 A B 0.0000
144 A B 0.0000
145 V B 0.0000
146 T B 0.0000
147 I B 0.0000
148 I B 0.0000
149 D B 0.0000
150 A B 0.0000
151 V B 0.0000
152 A B 0.0000
153 R B 0.0000
154 L B -0.3271
155 I B 0.0000
156 P B -0.3897
157 G B -0.4842
158 V B 0.0000
159 L B -0.7937
160 G B -1.5605
161 D B -2.6956
162 E B -1.8839
163 N B 0.0000
164 S B -1.6620
165 P B -1.4408
166 N B -2.1809
167 E B -2.4954
168 E B 0.0000
169 S B 0.0000
170 F B -0.4842
171 T B -1.2750
172 T B -0.7898
173 G B -0.7265
174 L B 0.0000
175 L B 0.0000
176 E B -0.7131
177 Y B -0.3891
178 P B -0.1517
179 H B 0.0000
180 F B 0.0000
181 T B 0.0000
182 R B -2.0070
183 P B -1.9297
184 A B -2.0843
185 E B -2.8963
186 F B 0.0000
187 M B -0.0544
188 G B -1.1891
189 K B -2.0788
190 K B -2.9946
191 V B 0.0000
192 P B -1.2790
193 E B -1.6269
194 V B -1.1135
195 L B 0.0000
196 I B 0.3162
197 S B -0.5998
198 G B -1.6203
199 N B -2.5924
200 H B -3.0900
201 E B -3.3891
202 E B -3.3058
203 I B 0.0000
204 R B -2.7385
205 R B -2.8553
206 W B -1.5374
207 R B -1.3971
208 L B -1.0426
209 T B -1.1457
210 E B -1.2353
211 S B 0.0000
212 I B 0.0000
213 K B -2.1087
214 T B -1.5081
215 T B 0.0000
216 L B -1.0553
217 Q B -1.9712
218 N B -1.8413
219 R B -1.2378
220 P B -0.9945
221 D B -0.9170
222 M B 0.0000
223 I B 0.0000
224 L B 0.3187
225 R B -1.4647
226 K B -0.9285
227 S B -0.7845
228 L B -1.0067
229 S B -1.6093
230 R B -2.7709
231 E B -2.2284
232 E B -1.7667
233 E B -2.0008
234 Q B -1.8691
235 I B -1.2103
236 L B 0.0000
237 W B -0.0700
238 S B -0.4297
239 L B -0.3621
240 T B -0.8436
241 R B -1.5172
247 Y B 0.3039
248 N B -0.4479
249 I B -0.1321
250 Y B 0.0000
251 V B 0.0000
252 A B 0.0000
253 L B 0.0000
254 M B 0.0000
255 H B 0.0000
256 Y B 1.1714
257 P B 0.2868
258 M B 0.0000
259 R B -1.2088
260 D B -1.5632
261 K B -1.8128
262 E B -2.7152
263 G B -2.0129
264 K B -1.8002
265 V B 0.7174
266 V B 0.8146
267 T B 0.7918
268 T B 0.3187
269 S B -0.0940
270 I B -0.2392
271 T B -0.4914
272 N B -1.1035
273 M B -0.4646
274 D B 0.0000
275 L B 0.0000
276 H B -0.2781
277 D B 0.0000
278 I B 0.0000
279 S B -0.7895
280 R B -1.3118
281 S B 0.0000
282 C B 0.0000
283 R B -2.0833
284 T B 0.0000
285 F B 0.0000
286 G B -0.6262
287 V B 0.0000
288 K B -1.3307
289 N B 0.0000
290 Y B 0.0000
291 F B 0.0000
292 V B 0.0000
293 V B 0.0000
294 N B 0.0000
295 P B -0.0805
296 M B -0.0411
297 P B -0.6636
298 A B -0.5718
299 Q B -0.7996
300 R B -1.3251
301 E B -2.0238
302 I B -1.0231
303 A B 0.0000
304 S B -1.6097
305 R B -2.8230
306 V B -1.3454
307 V B -0.9912
308 R B -2.2793
309 H B -1.7679
310 W B -0.1760
311 I B 0.7966
312 K B -1.1295
328 Y B 0.2569
329 T B 0.3264
330 I B 0.8536
331 I B 0.2743
332 T B -0.1131
333 D B -0.5998
334 S B -0.0997
335 L B -0.0790
336 A B -0.3925
337 S B -0.7448
338 V B 0.0000
339 I B -1.1145
340 K B -2.5193
341 S B -2.0118
342 I B 0.0000
343 E B -2.6867
344 E B -3.5065
345 K B -3.3149
346 E B -2.3543
347 S B -1.8920
348 G B -1.6708
349 S B -1.4701
350 P B 0.0000
351 I B -0.7962
352 I B 0.0000
353 I B 0.0000
354 A B 0.0000
355 T B 0.0000
356 T B -0.1575
357 A B -0.2808
358 R B -0.8659
359 Y B -1.3796
360 Q B -2.1521
361 Q B -2.7065
362 K B -2.3642
363 A B 0.0000
364 I B 0.0000
365 S B -1.2541
366 I B 0.0000
367 E B -2.0795
368 K B -2.2666
369 L B 0.0000
370 K B -2.0908
371 E B -2.8648
372 I B -1.7864
373 A B 0.0000
374 D B -2.7138
375 R B -2.4537
376 P B -1.2328
377 I B 0.0000
378 L B 0.0000
379 L B 0.0000
380 L B 0.0000
381 F B 0.0000
382 G B 0.0592
383 T B -0.0478
384 G B -0.3236
385 W B -0.3599
386 G B -0.2093
387 F B 0.0000
388 V B 0.0000
389 D B -2.9827
390 D B -2.7867
391 I B 0.0000
392 L B 0.0000
393 E B -2.2439
394 F B -0.0728
395 A B 0.0000
396 D B -1.3624
397 Y B -0.8080
398 V B 0.0000
399 L B 0.0000
400 K B -1.3680
401 P B 0.0000
402 I B 0.0000
403 H B -0.3968
404 G B -0.4895
405 V B -0.1766
406 G B -0.3973
407 D B -0.3255
408 F B 0.0000
409 N B -0.4072
410 H B -0.3304
411 L B -0.0052
412 S B 0.0000
413 V B 0.1893
414 R B 0.0000
415 S B 0.0000
416 A B 0.1004
417 V B 0.0000
418 A B 0.0000
419 I B 0.0000
420 Y B 0.0000
421 L B 0.0000
422 D B 0.0000
423 R B -0.6383
424 I B 0.0000
425 N B 0.0000
426 R B -0.9351
427 S B -0.6531
428 F B 0.0325
429 Q B -0.9490
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Laboratory of Theory of Biopolymers 2018