| Chain sequence(s) |
L: KDIFVYFKSDKAD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:20)
[INFO] Main: Simulation completed successfully. (00:00:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 336 | K | L | -2.0303 | |
| 337 | D | L | -1.7382 | |
| 338 | I | L | 2.0006 | |
| 339 | F | L | 2.4154 | |
| 340 | V | L | 2.3267 | |
| 341 | Y | L | 1.9916 | |
| 342 | F | L | 2.0252 | |
| 343 | K | L | -0.5346 | |
| 344 | S | L | -0.6498 | |
| 345 | D | L | -2.1273 | |
| 346 | K | L | -2.0123 | |
| 347 | A | L | -0.5717 | |
| 348 | D | L | -1.7788 |