Project name: 1f0n_stab-T

Status: done

Started: 2025-02-06 08:49:50
Settings
Chain sequence(s) A: SRPGLPVEYLQVPSPSMGRDIKVQFQSGGNNSPAVYLLDGLRAQDDYNGWDINTPAFEWYYQSGLSIVMPVGGQSSFYSDWYSPACGKAGCQTYKWETFLTSELPQWLSANRAVKPTGSAAIGLSMAGSSAMILAAYHPQQFIYAGSLSALLDPSQGDGPAFLDKAMGDAGGYKAADMWGPSSDPAWERNDPTQQIPKLVANNTRLWVYCGNGTPNSAGGNTPAASALENFVRSSNLKFQDAYNAAGGHNAVFNFPPNGTHSWEYWGAQLNAMKGDLQSSLGAG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:27)
Show buried residues

Minimal score value
-3.2048
Maximal score value
1.5184
Average score
-0.6057
Total score value
-172.011

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 S A -1.1793
3 R A -1.9228
4 P A -1.2558
5 G A -0.9413
6 L A -0.4636
7 P A -0.0598
8 V A 0.2451
9 E A -0.2611
10 Y A 0.0361
11 L A 0.0000
12 Q A -1.4250
13 V A 0.0000
14 P A -1.3081
15 S A 0.0000
16 P A -0.9476
17 S A -0.7110
18 M A 0.0000
19 G A -1.3469
20 R A -1.8788
21 D A -2.1846
22 I A 0.0000
23 K A -1.4105
24 V A 0.0000
25 Q A 0.0000
26 F A 0.0000
27 Q A 0.0000
28 S A -0.7893
29 G A -1.0968
30 G A -1.5526
31 N A -2.2971
32 N A -2.3737
33 S A 0.0000
34 P A 0.0000
35 A A 0.0000
36 V A 0.0000
37 Y A 0.0000
38 L A 0.0000
39 L A 0.0000
40 D A 0.0000
41 G A -0.7278
42 L A -1.2129
43 R A -2.6818
44 A A 0.0000
45 Q A -2.8695
46 D A -3.2048
47 D A -2.2784
48 Y A -0.2459
49 N A 0.0000
50 G A 0.0000
51 W A 0.0000
52 D A 0.5260
53 I A 1.5184
54 N A -0.4281
55 T A 0.0000
56 P A -0.5188
57 A A 0.0000
58 F A 0.0000
59 E A -0.6778
60 W A -0.2654
61 Y A 0.0000
62 Y A -0.0469
63 Q A -1.0847
64 S A 0.0000
65 G A -1.0220
66 L A 0.0000
67 S A 0.0000
68 I A 0.0000
69 V A 0.0000
70 M A 0.0000
71 P A 0.0000
72 V A 0.0000
73 G A -1.8284
74 G A -1.2510
75 Q A -1.6799
76 S A 0.0000
77 S A 0.0000
78 F A 0.0000
79 Y A 0.0000
80 S A 0.0000
81 D A -0.4355
82 W A 0.0000
83 Y A 0.9446
84 S A 0.0217
85 P A -0.2598
86 A A 0.0000
87 C A -0.2464
88 G A -1.1116
89 K A -1.8487
90 A A -0.7887
91 G A -0.4350
92 C A 0.2066
93 Q A -0.4925
94 T A -0.4391
95 Y A 0.0000
96 K A -0.6727
97 W A 0.0000
98 E A 0.0000
99 T A -0.4389
100 F A 0.0000
101 L A 0.0000
102 T A -0.4089
103 S A -0.6512
104 E A -0.8105
105 L A 0.0000
106 P A 0.0000
107 Q A -1.4447
108 W A -0.6075
109 L A 0.0000
110 S A -1.2983
111 A A -0.7504
112 N A -1.0536
113 R A -1.5323
114 A A -1.6645
115 V A 0.0000
116 K A -1.8538
117 P A -1.1861
118 T A -0.9048
119 G A -0.5651
120 S A 0.0000
121 A A 0.0000
122 A A 0.0000
123 I A 0.0000
124 G A 0.0000
125 L A 0.0000
126 S A -0.0894
127 M A -0.0910
128 A A 0.0000
129 G A 0.0000
130 S A 0.0154
131 S A 0.0000
132 A A 0.0000
133 M A 0.0000
134 I A 0.0000
135 L A 0.0000
136 A A 0.0000
137 A A 0.0000
138 Y A -0.2010
139 H A -0.5641
140 P A -0.9930
141 Q A -1.4046
142 Q A -0.9579
143 F A 0.0000
144 I A -0.4276
145 Y A 0.0000
146 A A 0.0000
147 G A 0.0000
148 S A 0.0000
149 L A 0.0000
150 S A 0.0000
151 A A 0.0000
152 L A 0.3520
153 L A 0.0000
154 D A -1.3826
155 P A 0.0000
156 S A -1.7228
157 Q A -2.2398
158 G A -1.9591
159 D A -2.3557
160 G A -1.6507
161 P A 0.0000
162 A A -1.3783
163 F A -1.0259
164 L A 0.0000
165 D A -2.5000
166 K A -2.7868
167 A A -2.0951
168 M A 0.0000
169 G A -2.6675
170 D A -3.1028
171 A A 0.0000
172 G A -1.8127
173 G A -2.1232
174 Y A 0.0000
175 K A -2.5183
176 A A 0.0000
177 A A -0.8802
178 D A -0.5591
179 M A 0.0000
180 W A 0.0000
181 G A -0.5126
182 P A -0.8428
183 S A -1.2395
184 S A -0.8347
185 D A -1.1156
186 P A -1.0770
187 A A 0.0000
188 W A 0.0000
189 E A -1.8711
190 R A -1.3293
191 N A 0.0000
192 D A 0.0000
193 P A 0.0000
194 T A -1.1745
195 Q A -1.5232
196 Q A 0.0000
197 I A 0.0000
198 P A -0.9682
199 K A -1.2636
200 L A 0.0000
201 V A -1.2635
202 A A -0.8862
203 N A -1.4909
204 N A -1.6968
205 T A 0.0000
206 R A -1.2966
207 L A 0.0000
208 W A 0.0000
209 V A 0.0000
210 Y A 0.0000
211 C A 0.0000
212 G A 0.0000
213 N A -0.6632
214 G A 0.0000
215 T A -1.2125
216 P A -1.6142
217 N A -1.7903
218 S A -1.0484
219 A A -1.1736
220 G A -1.3561
221 G A -1.4198
222 N A -1.7412
223 T A -0.8642
224 P A -0.5011
225 A A -0.2831
226 A A 0.0000
227 S A -0.5931
228 A A 0.0002
229 L A 0.3691
230 E A 0.0000
231 N A -0.8182
232 F A 0.5624
233 V A 0.0000
234 R A 0.0000
235 S A -0.3441
236 S A -0.5516
237 N A 0.0000
238 L A -0.0643
239 K A -2.0690
240 F A 0.0000
241 Q A 0.0000
242 D A -2.5400
243 A A -1.7410
244 Y A 0.0000
245 N A -2.3545
246 A A -1.2579
247 A A -0.9152
248 G A -1.1342
249 G A -1.7471
250 H A -1.7015
251 N A -1.3487
252 A A -0.4891
253 V A 0.6555
254 F A 1.0690
255 N A 0.6326
256 F A 1.2921
257 P A 0.2045
258 P A -0.4710
259 N A -0.8971
260 G A 0.0000
261 T A 0.0000
262 H A -0.6289
263 S A -0.7745
264 W A -0.6836
265 E A -1.7209
266 Y A 0.0000
267 W A 0.0000
268 G A 0.0000
269 A A -0.5715
270 Q A -0.5695
271 L A 0.0000
272 N A -0.7339
273 A A -0.6542
274 M A 0.0000
275 K A -1.2189
276 G A -1.3924
277 D A -1.5806
278 L A 0.0000
279 Q A -1.2246
280 S A -1.0689
281 S A -0.7749
282 L A -0.5095
283 G A -0.7947
284 A A -0.9497
285 G A -0.9001
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Laboratory of Theory of Biopolymers 2018