| Chain sequence(s) |
A: ACYCRIPACIAGERRYGTCIYQGRLWAFCC
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:30)
[INFO] Main: Simulation completed successfully. (00:00:30)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.6515 | |
| 2 | C | A | 0.9190 | |
| 3 | Y | A | 1.6319 | |
| 4 | C | A | 0.6670 | |
| 5 | R | A | -1.0036 | |
| 6 | I | A | 0.3251 | |
| 7 | P | A | 0.0335 | |
| 8 | A | A | 0.3937 | |
| 9 | C | A | 0.7979 | |
| 10 | I | A | -0.1639 | |
| 11 | A | A | -0.4016 | |
| 12 | G | A | -1.0465 | |
| 13 | E | A | -2.2993 | |
| 14 | R | A | -3.1008 | |
| 15 | R | A | -2.4108 | |
| 16 | Y | A | -0.2996 | |
| 17 | G | A | -0.1310 | |
| 18 | T | A | 0.4525 | |
| 19 | C | A | 1.2746 | |
| 20 | I | A | 2.2674 | |
| 21 | Y | A | 1.4621 | |
| 22 | Q | A | -0.5392 | |
| 23 | G | A | -0.3712 | |
| 24 | R | A | -0.5215 | |
| 25 | L | A | 0.3559 | |
| 26 | W | A | 0.5287 | |
| 27 | A | A | 0.0000 | |
| 28 | F | A | -0.6877 | |
| 29 | C | A | 0.3052 | |
| 30 | C | A | 1.0749 |