Project name: query_structure

Status: done

Started: 2026-03-16 22:52:38
Settings
Chain sequence(s) A: ACYCRIPACIAGERRYGTCIYQGRLWAFCC
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:30)
Show buried residues

Minimal score value
-3.1008
Maximal score value
2.2674
Average score
0.0055
Total score value
0.1642

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A 0.6515
2 C A 0.9190
3 Y A 1.6319
4 C A 0.6670
5 R A -1.0036
6 I A 0.3251
7 P A 0.0335
8 A A 0.3937
9 C A 0.7979
10 I A -0.1639
11 A A -0.4016
12 G A -1.0465
13 E A -2.2993
14 R A -3.1008
15 R A -2.4108
16 Y A -0.2996
17 G A -0.1310
18 T A 0.4525
19 C A 1.2746
20 I A 2.2674
21 Y A 1.4621
22 Q A -0.5392
23 G A -0.3712
24 R A -0.5215
25 L A 0.3559
26 W A 0.5287
27 A A 0.0000
28 F A -0.6877
29 C A 0.3052
30 C A 1.0749
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Laboratory of Theory of Biopolymers 2018