| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFRDIVVNGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPVHPGPDDRVAFSWDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPEGHPLPAAPPPSPLYVPPPPSSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPFINVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9423 | |
| 2 | L | A | 1.9622 | |
| 3 | P | A | 0.8316 | |
| 4 | P | A | 0.3822 | |
| 5 | T | A | 0.1276 | |
| 6 | T | A | 0.1311 | |
| 7 | P | A | 0.1888 | |
| 8 | V | A | 1.2155 | |
| 9 | A | A | 0.0930 | |
| 10 | K | A | -1.0151 | |
| 11 | V | A | -0.1430 | |
| 12 | Q | A | -1.4048 | |
| 13 | S | A | -1.5408 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.3874 | |
| 16 | E | A | -2.4258 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4630 | |
| 20 | P | A | 0.1342 | |
| 21 | T | A | 0.1842 | |
| 22 | S | A | -0.0893 | |
| 23 | L | A | 0.1115 | |
| 24 | F | A | -0.0116 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2874 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8981 | |
| 31 | R | A | -2.6821 | |
| 32 | L | A | -0.7989 | |
| 33 | L | A | 1.1597 | |
| 34 | T | A | 1.3616 | |
| 35 | V | A | 1.8316 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7037 | |
| 40 | R | A | -1.7549 | |
| 41 | D | A | -0.7217 | |
| 42 | I | A | 1.2583 | |
| 43 | V | A | 2.2158 | |
| 44 | V | A | 1.6641 | |
| 45 | N | A | -0.5327 | |
| 46 | G | A | -0.3664 | |
| 47 | K | A | -0.1361 | |
| 48 | V | A | 2.0145 | |
| 49 | L | A | 2.5281 | |
| 50 | V | A | 1.4495 | |
| 51 | P | A | 0.3340 | |
| 52 | K | A | -0.6852 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1710 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3998 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2710 | |
| 70 | K | A | -1.7887 | |
| 71 | F | A | -0.6346 | |
| 72 | A | A | -0.5768 | |
| 73 | L | A | -0.8616 | |
| 74 | P | A | -1.2647 | |
| 75 | Q | A | -2.5091 | |
| 76 | K | A | -3.1131 | |
| 77 | D | A | -2.9977 | |
| 78 | F | A | -1.6730 | |
| 79 | Y | A | -1.9072 | |
| 80 | D | A | -2.7097 | |
| 81 | P | A | -2.3144 | |
| 82 | E | A | -3.0566 | |
| 83 | K | A | -3.4024 | |
| 84 | E | A | -2.4693 | |
| 85 | R | A | -1.3018 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6554 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9539 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3456 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6927 | |
| 99 | G | A | -0.5390 | |
| 100 | P | A | -0.4134 | |
| 101 | L | A | 0.0264 | |
| 102 | G | A | -0.2263 | |
| 103 | K | A | -0.6548 | |
| 104 | G | A | -0.4553 | |
| 105 | T | A | -0.4340 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1157 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4171 | |
| 110 | L | A | 0.3323 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1426 | |
| 113 | K | A | -0.5130 | |
| 114 | L | A | -0.9476 | |
| 115 | G | A | -0.6964 | |
| 116 | D | A | -1.1487 | |
| 117 | T | A | -0.7821 | |
| 118 | E | A | -1.6601 | |
| 119 | N | A | -1.9323 | |
| 120 | P | A | -1.3296 | |
| 121 | T | A | -0.6769 | |
| 122 | A | A | -0.4230 | |
| 123 | P | A | -0.2300 | |
| 124 | V | A | -0.3315 | |
| 125 | H | A | -0.7651 | |
| 126 | P | A | -1.3090 | |
| 127 | G | A | -1.4754 | |
| 128 | P | A | -1.5042 | |
| 129 | D | A | -2.3342 | |
| 130 | D | A | -1.8031 | |
| 131 | R | A | -1.1186 | |
| 132 | V | A | 0.2513 | |
| 133 | A | A | 0.4622 | |
| 134 | F | A | 0.3116 | |
| 135 | S | A | -0.0692 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.4372 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2393 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5575 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2034 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1059 | |
| 157 | D | A | 0.2863 | |
| 158 | I | A | 0.8455 | |
| 159 | A | A | 0.1205 | |
| 160 | E | A | -1.4752 | |
| 161 | P | A | -0.2141 | |
| 162 | C | A | 0.1914 | |
| 163 | P | A | -0.1669 | |
| 164 | G | A | -0.0689 | |
| 165 | L | A | 0.6075 | |
| 166 | P | A | -0.1032 | |
| 167 | P | A | -0.3338 | |
| 168 | G | A | -0.4211 | |
| 169 | A | A | -0.0215 | |
| 170 | C | A | 0.7457 | |
| 171 | P | A | 0.5570 | |
| 172 | P | A | 0.8753 | |
| 173 | I | A | 2.0411 | |
| 174 | Q | A | 0.8295 | |
| 175 | L | A | 1.4314 | |
| 176 | V | A | 0.8308 | |
| 177 | N | A | -0.2960 | |
| 178 | S | A | 0.0296 | |
| 179 | V | A | 0.4335 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3833 | |
| 182 | D | A | 0.0776 | |
| 183 | G | A | -0.1621 | |
| 184 | D | A | -0.5378 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1035 | |
| 190 | F | A | 0.0621 | |
| 191 | G | A | -0.1087 | |
| 192 | N | A | -0.2698 | |
| 193 | M | A | -0.1340 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3849 | |
| 197 | E | A | -2.6174 | |
| 198 | L | A | -1.2248 | |
| 199 | Q | A | -2.5493 | |
| 200 | Q | A | -3.3084 | |
| 201 | D | A | -3.5818 | |
| 202 | R | A | -3.3490 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.0222 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.4034 | |
| 211 | S | A | -1.9148 | |
| 212 | T | A | -1.4503 | |
| 213 | R | A | -2.0911 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1622 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3401 | |
| 220 | L | A | 0.6064 | |
| 221 | K | A | -1.1041 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8099 | |
| 224 | N | A | -1.4912 | |
| 225 | E | A | -1.2331 | |
| 226 | A | A | -0.5914 | |
| 227 | Y | A | -0.3534 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6522 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0789 | |
| 234 | F | A | 0.2624 | |
| 235 | G | A | -0.8069 | |
| 236 | R | A | -2.5791 | |
| 237 | R | A | -2.8368 | |
| 238 | E | A | -2.1414 | |
| 239 | Q | A | -0.2157 | |
| 240 | V | A | 1.4185 | |
| 241 | Y | A | 1.2369 | |
| 242 | A | A | 0.4247 | |
| 243 | R | A | -0.5372 | |
| 244 | H | A | -0.6986 | |
| 245 | F | A | 0.2027 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.8317 | |
| 249 | S | A | -1.2373 | |
| 250 | G | A | -1.1258 | |
| 251 | P | A | -1.0404 | |
| 252 | E | A | -1.3855 | |
| 253 | G | A | -1.2850 | |
| 254 | H | A | -1.4628 | |
| 255 | P | A | -0.9864 | |
| 256 | L | A | 0.2436 | |
| 257 | P | A | 0.0451 | |
| 258 | A | A | 0.1342 | |
| 259 | A | A | 0.4159 | |
| 260 | P | A | -0.2275 | |
| 261 | P | A | -0.1368 | |
| 262 | P | A | 0.0652 | |
| 263 | S | A | 0.5902 | |
| 264 | P | A | 0.7061 | |
| 265 | L | A | 1.9492 | |
| 266 | Y | A | 1.7974 | |
| 267 | V | A | 1.9675 | |
| 268 | P | A | 1.1145 | |
| 269 | P | A | 0.5704 | |
| 270 | P | A | -0.1957 | |
| 271 | P | A | -0.1557 | |
| 272 | S | A | -0.3528 | |
| 273 | S | A | 0.1381 | |
| 274 | P | A | 0.2689 | |
| 275 | Y | A | 1.1260 | |
| 276 | A | A | 0.9707 | |
| 277 | V | A | 1.8086 | |
| 278 | P | A | 0.9664 | |
| 279 | P | A | 0.0573 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.4732 | |
| 282 | D | A | -1.1265 | |
| 283 | Y | A | 0.7400 | |
| 284 | F | A | 0.6538 | |
| 285 | G | A | 0.3653 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9589 | |
| 291 | L | A | 1.6007 | |
| 292 | V | A | 0.6093 | |
| 293 | S | A | -0.1602 | |
| 294 | S | A | -0.9618 | |
| 295 | D | A | -1.8423 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0909 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6161 | |
| 301 | R | A | -1.8250 | |
| 302 | P | A | -0.9638 | |
| 303 | F | A | -0.1874 | |
| 304 | W | A | -0.5592 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0838 | |
| 307 | R | A | -2.8279 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2515 | |
| 310 | G | A | -1.2165 | |
| 311 | N | A | -1.2595 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8148 | |
| 319 | N | A | -0.9387 | |
| 320 | E | A | -1.0442 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3511 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0903 | |
| 333 | N | A | 0.5769 | |
| 334 | F | A | 1.7485 | |
| 335 | T | A | 0.8682 | |
| 336 | I | A | 0.4317 | |
| 337 | S | A | -0.8322 | |
| 338 | Q | A | -1.4650 | |
| 339 | Q | A | -0.4426 | |
| 340 | L | A | 0.9099 | |
| 341 | S | A | 0.7149 | |
| 342 | T | A | 0.6609 | |
| 343 | P | A | 0.7442 | |
| 344 | F | A | 2.0592 | |
| 345 | I | A | 1.6681 | |
| 346 | N | A | 0.5354 | |
| 347 | V | A | 1.9626 | |
| 348 | Y | A | 1.5223 | |
| 349 | D | A | -0.0404 | |
| 350 | P | A | -0.6082 | |
| 351 | S | A | -0.4776 | |
| 352 | N | A | -0.1195 | |
| 353 | F | A | -0.6798 | |
| 354 | K | A | -1.8114 | |
| 355 | N | A | -1.7254 | |
| 356 | Y | A | -0.1083 | |
| 357 | L | A | 0.6693 | |
| 358 | R | A | 1.0049 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3971 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0741 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0344 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6827 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3065 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3151 | |
| 376 | L | A | -1.7116 | |
| 377 | D | A | -1.9897 | |
| 378 | P | A | -1.0372 | |
| 379 | G | A | -1.0165 | |
| 380 | V | A | -0.9372 | |
| 381 | L | A | -0.5360 | |
| 382 | A | A | -0.6627 | |
| 383 | H | A | -0.8122 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4300 | |
| 386 | T | A | -0.5576 | |
| 387 | M | A | -0.2990 | |
| 388 | N | A | -0.8684 | |
| 389 | P | A | -1.2509 | |
| 390 | T | A | -1.4358 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4371 | |
| 393 | E | A | -2.7661 | |
| 394 | N | A | -2.3629 | |
| 395 | W | A | -1.3599 | |
| 396 | N | A | -1.0945 | |
| 397 | L | A | -0.2134 | |
| 398 | G | A | 0.5228 | |
| 399 | F | A | 2.4162 | |
| 400 | V | A | 1.8224 | |
| 401 | P | A | 0.0444 | |
| 402 | P | A | -1.7931 | |
| 403 | K | A | -3.3101 | |
| 404 | E | A | -3.7551 | |
| 405 | R | A | -3.8721 | |
| 406 | E | A | -3.7634 | |
| 407 | D | A | -2.8531 | |
| 408 | P | A | -1.7516 | |
| 409 | Y | A | -0.9819 | |
| 410 | K | A | -2.1127 | |
| 411 | G | A | -0.6354 | |
| 412 | L | A | 0.6759 | |
| 413 | I | A | 1.5863 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3981 | |
| 416 | E | A | -1.6984 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9616 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0638 | |
| 421 | E | A | -2.7934 | |
| 422 | R | A | -2.6483 | |
| 423 | F | A | -1.2810 | |
| 424 | S | A | -1.4556 | |
| 425 | Q | A | -1.8365 | |
| 426 | D | A | -2.8688 | |
| 427 | L | A | -1.9678 | |
| 428 | D | A | -2.7479 | |
| 429 | Q | A | -2.5998 | |
| 430 | F | A | -1.4224 | |
| 431 | A | A | -0.9082 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6288 | |
| 435 | K | A | -0.7433 | |
| 436 | F | A | 0.1222 | |
| 437 | L | A | 1.0099 | |
| 438 | Y | A | 0.8091 | |
| 439 | Q | A | -0.2854 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine