| Chain sequence(s) |
A: DPKRLYCKNGGFFLRIHPDGRVDGVREKSDPHIKLQLQAEERGVVSIKGVCANRYLAMKEDGRLLASKCVTDECFFFERLESNNYNTYRSRKYTSWYVALKRTGQYKLGSKTGPGQKAILFLPMSA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:18)
[INFO] Main: Simulation completed successfully. (00:02:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 19 | D | A | -2.0890 | |
| 20 | P | A | -1.4825 | |
| 21 | K | A | -1.1952 | |
| 22 | R | A | -1.0595 | |
| 23 | L | A | 0.0000 | |
| 24 | Y | A | -0.3007 | |
| 25 | C | A | 0.0000 | |
| 26 | K | A | -1.6582 | |
| 27 | N | A | 0.0000 | |
| 28 | G | A | -1.9020 | |
| 29 | G | A | -1.4403 | |
| 30 | F | A | -1.9086 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | 0.0000 | |
| 33 | R | A | -1.2240 | |
| 34 | I | A | 0.0000 | |
| 35 | H | A | -1.7689 | |
| 36 | P | A | -2.0208 | |
| 37 | D | A | -2.6888 | |
| 38 | G | A | -2.0985 | |
| 39 | R | A | -2.4443 | |
| 40 | V | A | 0.0000 | |
| 41 | D | A | -1.2953 | |
| 42 | G | A | -1.4670 | |
| 43 | V | A | 0.0000 | |
| 44 | R | A | -3.2066 | |
| 45 | E | A | -3.6964 | |
| 46 | K | A | -3.3732 | |
| 47 | S | A | -2.1345 | |
| 48 | D | A | -2.0142 | |
| 49 | P | A | -1.0443 | |
| 50 | H | A | -0.9128 | |
| 51 | I | A | 0.0000 | |
| 52 | K | A | -1.4585 | |
| 53 | L | A | 0.0000 | |
| 54 | Q | A | -1.2153 | |
| 55 | L | A | -0.7336 | |
| 56 | Q | A | -1.0686 | |
| 57 | A | A | -1.9251 | |
| 58 | E | A | -3.0580 | |
| 59 | E | A | -3.4091 | |
| 60 | R | A | -3.0849 | |
| 61 | G | A | -1.9659 | |
| 62 | V | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | S | A | 0.0000 | |
| 65 | I | A | 0.0000 | |
| 66 | K | A | -0.7577 | |
| 67 | G | A | 0.0000 | |
| 68 | V | A | -0.2014 | |
| 69 | C | A | -0.0461 | |
| 70 | A | A | -1.2146 | |
| 71 | N | A | -1.5846 | |
| 72 | R | A | -1.6067 | |
| 73 | Y | A | -0.2994 | |
| 74 | L | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | M | A | 0.0000 | |
| 77 | K | A | -2.4845 | |
| 78 | E | A | -3.3948 | |
| 79 | D | A | -3.1301 | |
| 80 | G | A | 0.0000 | |
| 81 | R | A | -1.9849 | |
| 82 | L | A | 0.0000 | |
| 83 | L | A | -0.7482 | |
| 84 | A | A | 0.0000 | |
| 85 | S | A | -0.9976 | |
| 86 | K | A | -1.7664 | |
| 87 | C | A | 0.0846 | |
| 88 | V | A | 0.6147 | |
| 89 | T | A | -0.3931 | |
| 90 | D | A | -1.9861 | |
| 91 | E | A | -1.7047 | |
| 92 | C | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | F | A | 0.0000 | |
| 95 | F | A | -1.2818 | |
| 96 | E | A | -1.3286 | |
| 97 | R | A | -1.7432 | |
| 98 | L | A | -0.5589 | |
| 99 | E | A | -1.5939 | |
| 100 | S | A | -1.5663 | |
| 101 | N | A | -1.9728 | |
| 102 | N | A | -1.9260 | |
| 103 | Y | A | -1.1268 | |
| 104 | N | A | -0.7983 | |
| 105 | T | A | 0.0000 | |
| 106 | Y | A | 0.0000 | |
| 107 | R | A | -0.9760 | |
| 108 | S | A | 0.0000 | |
| 109 | R | A | -1.5201 | |
| 110 | K | A | -2.3761 | |
| 111 | Y | A | -1.2543 | |
| 112 | T | A | -0.6732 | |
| 113 | S | A | -0.7154 | |
| 114 | W | A | -0.5827 | |
| 115 | Y | A | -0.3301 | |
| 116 | V | A | 0.0000 | |
| 117 | A | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | K | A | -2.4023 | |
| 120 | R | A | -2.8843 | |
| 121 | T | A | -1.6530 | |
| 122 | G | A | 0.0000 | |
| 123 | Q | A | -1.7766 | |
| 124 | Y | A | -1.2163 | |
| 125 | K | A | -1.3337 | |
| 126 | L | A | -1.1953 | |
| 127 | G | A | 0.0000 | |
| 128 | S | A | -1.6876 | |
| 129 | K | A | -1.7386 | |
| 130 | T | A | -1.2424 | |
| 131 | G | A | -1.0320 | |
| 132 | P | A | -0.8301 | |
| 133 | G | A | -1.0814 | |
| 134 | Q | A | -1.5821 | |
| 135 | K | A | -2.3072 | |
| 136 | A | A | 0.0000 | |
| 137 | I | A | 0.0000 | |
| 138 | L | A | -0.7271 | |
| 139 | F | A | 0.0000 | |
| 140 | L | A | -0.2477 | |
| 141 | P | A | -0.0136 | |
| 142 | M | A | -0.1057 | |
| 143 | S | A | -0.7435 | |
| 144 | A | A | -1.0758 |