Project name: 202(9)

Status: done

Started: 2026-01-20 09:15:29
Settings
Chain sequence(s) A: KWCFTVCYRGICYRRCR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:19)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:19)
Show buried residues

Minimal score value
-1.7192
Maximal score value
2.408
Average score
0.1173
Total score value
1.994

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.3699
2 W A -0.0513
3 C A -0.1371
4 F A 0.1587
5 T A 0.0740
6 V A 0.9347
7 C A 1.8737
8 Y A 1.5394
9 R A -0.5457
10 G A 0.4630
11 I A 2.4080
12 C A 1.8349
13 Y A 0.7032
14 R A -1.4877
15 R A -1.7192
16 C A -1.0063
17 R A -1.6784
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Laboratory of Theory of Biopolymers 2018