| Chain sequence(s) |
L: DIAVVSSPYYKPAPK
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | D | L | -1.8667 | |
| 1 | I | L | 1.7040 | |
| 2 | A | L | 0.6612 | |
| 3 | V | L | 1.5674 | |
| 4 | V | L | 1.9573 | |
| 5 | S | L | 0.0981 | |
| 6 | S | L | 0.0152 | |
| 7 | P | L | -0.0246 | |
| 8 | Y | L | 1.5165 | |
| 9 | Y | L | 1.2571 | |
| 10 | K | L | -1.5057 | |
| 11 | P | L | -0.5468 | |
| 12 | A | L | -0.0030 | |
| 13 | P | L | -0.7992 | |
| 14 | K | L | -2.1637 |