| Chain sequence(s) |
A: GPAAANPAPALRSTDDYVTPTDLYYYAETDLITETGNPTKDIVVNGKVLVPKVSAYQFKVFKLTLPDPNEMPLPSDDFIDPSTEILIWRLEALKIHRFGELGKGTYGHPNFNALGDVTNPTTYVKGGADDTINLSFTPKRLQLYIVGDEPPTGKYIDIAPPEPGLPPGAIPPLTTVSTTIQDGDMADIGFGAKDYAKLDPDKNNVPDIIKDTTTKRPDYDGMRAEPLGRRMFDYDEKESSSNSKTLVKDGPDPIPLPDAPPPSPLYVPPPPWSPYAVRPPYNYFTIPDRGEITEEDLLFNKPRFFERTEGLNQGVLWYNRLYITVLDNSRATIEVIKTQTCTPAPNVYDPSCYVTSKKYTREYKLSLIVQLCRIPLTPEILAEIERIDPRILVDAKLPFVPPVVRPDPYAGLKFIEIDLTDKLSSDLEKSELGREFLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.5626 | |
| 2 | P | A | -0.4252 | |
| 3 | A | A | -0.3578 | |
| 4 | A | A | -0.4352 | |
| 5 | A | A | -0.6131 | |
| 6 | N | A | -1.3632 | |
| 7 | P | A | -0.8715 | |
| 8 | A | A | -0.5895 | |
| 9 | P | A | -0.4895 | |
| 10 | A | A | -0.1964 | |
| 11 | L | A | -0.2419 | |
| 12 | R | A | -1.3283 | |
| 13 | S | A | -1.4444 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.9248 | |
| 16 | D | A | -2.8096 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.9801 | |
| 20 | P | A | -0.9402 | |
| 21 | T | A | 0.0000 | |
| 22 | D | A | -1.5708 | |
| 23 | L | A | -0.3651 | |
| 24 | Y | A | -0.0100 | |
| 25 | Y | A | 0.0684 | |
| 26 | Y | A | -0.6567 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1456 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.2643 | |
| 31 | L | A | 0.3110 | |
| 32 | I | A | 0.2021 | |
| 33 | T | A | -0.1911 | |
| 34 | E | A | -0.5536 | |
| 35 | T | A | -0.5350 | |
| 36 | G | A | 0.0000 | |
| 37 | N | A | -1.5079 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5354 | |
| 40 | K | A | -1.8218 | |
| 41 | D | A | -0.4839 | |
| 42 | I | A | 1.5668 | |
| 43 | V | A | 2.4329 | |
| 44 | V | A | 1.6881 | |
| 45 | N | A | -0.5643 | |
| 46 | G | A | -0.3639 | |
| 47 | K | A | -0.0396 | |
| 48 | V | A | 2.1844 | |
| 49 | L | A | 2.7558 | |
| 50 | V | A | 1.6139 | |
| 51 | P | A | 0.1154 | |
| 52 | K | A | -0.9973 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | -0.3470 | |
| 58 | F | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.3762 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | -1.5618 | |
| 67 | D | A | -1.3874 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.9081 | |
| 70 | E | A | -2.2242 | |
| 71 | M | A | -1.0818 | |
| 72 | P | A | -0.7275 | |
| 73 | L | A | -0.5889 | |
| 74 | P | A | -0.5993 | |
| 75 | S | A | -1.4363 | |
| 76 | D | A | -2.7604 | |
| 77 | D | A | -2.8382 | |
| 78 | F | A | -1.4348 | |
| 79 | I | A | 0.0000 | |
| 80 | D | A | -2.2520 | |
| 81 | P | A | -1.4600 | |
| 82 | S | A | -0.9439 | |
| 83 | T | A | -0.9039 | |
| 84 | E | A | -1.1346 | |
| 85 | I | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3454 | |
| 90 | L | A | 0.0000 | |
| 91 | E | A | -0.5474 | |
| 92 | A | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.4186 | |
| 97 | R | A | 0.0000 | |
| 98 | F | A | 0.1539 | |
| 99 | G | A | -0.9157 | |
| 100 | E | A | -1.7437 | |
| 101 | L | A | -1.0680 | |
| 102 | G | A | -1.1899 | |
| 103 | K | A | -1.7393 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4761 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7797 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.2563 | |
| 110 | N | A | -1.8951 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.3733 | |
| 113 | A | A | 0.0000 | |
| 114 | L | A | -0.6137 | |
| 115 | G | A | -0.5374 | |
| 116 | D | A | -1.0040 | |
| 117 | V | A | -0.2132 | |
| 118 | T | A | -0.9718 | |
| 119 | N | A | -1.6392 | |
| 120 | P | A | -0.8310 | |
| 121 | T | A | -0.5003 | |
| 122 | T | A | -0.2895 | |
| 123 | Y | A | 0.2335 | |
| 124 | V | A | -0.4016 | |
| 125 | K | A | -1.2514 | |
| 126 | G | A | -1.6903 | |
| 127 | G | A | -1.6139 | |
| 128 | A | A | -1.2387 | |
| 129 | D | A | -2.2514 | |
| 130 | D | A | -1.5516 | |
| 131 | T | A | -1.2184 | |
| 132 | I | A | -0.4843 | |
| 133 | N | A | -1.3290 | |
| 134 | L | A | 0.0000 | |
| 135 | S | A | -0.5098 | |
| 136 | F | A | 0.0000 | |
| 137 | T | A | -0.7437 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | R | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.3581 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.4675 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.7669 | |
| 155 | Y | A | -0.2636 | |
| 156 | I | A | 0.8740 | |
| 157 | D | A | 0.4845 | |
| 158 | I | A | 1.0553 | |
| 159 | A | A | 0.3930 | |
| 160 | P | A | -0.5173 | |
| 161 | P | A | -1.0004 | |
| 162 | E | A | -2.0462 | |
| 163 | P | A | -1.2323 | |
| 164 | G | A | -0.7102 | |
| 165 | L | A | 0.2335 | |
| 166 | P | A | 0.0672 | |
| 167 | P | A | -0.1637 | |
| 168 | G | A | 0.0842 | |
| 169 | A | A | 0.9930 | |
| 170 | I | A | 2.2012 | |
| 171 | P | A | 1.0967 | |
| 172 | P | A | 0.8411 | |
| 173 | L | A | 1.8958 | |
| 174 | T | A | 0.9659 | |
| 175 | T | A | 0.5472 | |
| 176 | V | A | 0.4915 | |
| 177 | S | A | -0.2818 | |
| 178 | T | A | -0.1742 | |
| 179 | T | A | -0.3942 | |
| 180 | I | A | 0.0000 | |
| 181 | Q | A | -0.7930 | |
| 182 | D | A | 0.0000 | |
| 183 | G | A | -0.6720 | |
| 184 | D | A | -0.7144 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.5983 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.4259 | |
| 190 | F | A | -0.0315 | |
| 191 | G | A | -0.2789 | |
| 192 | A | A | -0.5375 | |
| 193 | K | A | -0.5284 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -1.9485 | |
| 197 | K | A | -2.0429 | |
| 198 | L | A | -0.6130 | |
| 199 | D | A | 0.0000 | |
| 200 | P | A | -1.9566 | |
| 201 | D | A | -2.3449 | |
| 202 | K | A | -2.9568 | |
| 203 | N | A | -1.9089 | |
| 204 | N | A | -1.4328 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.5449 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | K | A | -1.9925 | |
| 211 | D | A | -2.1334 | |
| 212 | T | A | -1.2027 | |
| 213 | T | A | -0.7700 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | R | A | -1.3271 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -1.4328 | |
| 219 | Y | A | -1.6622 | |
| 220 | D | A | -2.5799 | |
| 221 | G | A | -1.9019 | |
| 222 | M | A | 0.0000 | |
| 223 | R | A | -3.0615 | |
| 224 | A | A | -1.7282 | |
| 225 | E | A | -1.4695 | |
| 226 | P | A | -0.7434 | |
| 227 | L | A | 0.0000 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.7159 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | D | A | -1.0190 | |
| 234 | Y | A | -0.4054 | |
| 235 | D | A | -0.8738 | |
| 236 | E | A | -1.1644 | |
| 237 | K | A | -1.5005 | |
| 238 | E | A | -1.3378 | |
| 239 | S | A | -1.0695 | |
| 240 | S | A | -1.0017 | |
| 241 | S | A | -1.2583 | |
| 242 | N | A | -1.9416 | |
| 243 | S | A | -1.5205 | |
| 244 | K | A | -1.8018 | |
| 245 | T | A | -0.7698 | |
| 246 | L | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | K | A | -0.4077 | |
| 249 | D | A | -1.1875 | |
| 250 | G | A | -0.9962 | |
| 251 | P | A | -0.4834 | |
| 252 | D | A | -0.0604 | |
| 253 | P | A | 0.6613 | |
| 254 | I | A | 1.6874 | |
| 255 | P | A | 0.4007 | |
| 256 | L | A | 0.5538 | |
| 257 | P | A | -0.4384 | |
| 258 | D | A | -1.5371 | |
| 259 | A | A | -0.6438 | |
| 260 | P | A | -0.6962 | |
| 261 | P | A | -0.2307 | |
| 262 | P | A | 0.0324 | |
| 263 | S | A | 0.2565 | |
| 264 | P | A | 0.6213 | |
| 265 | L | A | 1.5521 | |
| 266 | Y | A | 1.5192 | |
| 267 | V | A | 1.7749 | |
| 268 | P | A | 0.7741 | |
| 269 | P | A | 0.7607 | |
| 270 | P | A | 0.3929 | |
| 271 | P | A | 0.5912 | |
| 272 | W | A | 1.1089 | |
| 273 | S | A | 0.9577 | |
| 274 | P | A | 0.6668 | |
| 275 | Y | A | 1.3918 | |
| 276 | A | A | 1.2780 | |
| 277 | V | A | 1.3892 | |
| 278 | R | A | 0.2514 | |
| 279 | P | A | -0.2166 | |
| 280 | P | A | -0.3260 | |
| 281 | Y | A | 0.3687 | |
| 282 | N | A | 0.2138 | |
| 283 | Y | A | 1.2459 | |
| 284 | F | A | 0.4992 | |
| 285 | T | A | -0.4473 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -1.4533 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -1.5260 | |
| 291 | E | A | -2.0278 | |
| 292 | I | A | -1.6213 | |
| 293 | T | A | -1.9326 | |
| 294 | E | A | -2.7810 | |
| 295 | E | A | -2.9845 | |
| 296 | D | A | -2.3507 | |
| 297 | L | A | 0.0000 | |
| 298 | L | A | 0.0000 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.3003 | |
| 301 | K | A | -1.8187 | |
| 302 | P | A | -1.1613 | |
| 303 | R | A | -0.7314 | |
| 304 | F | A | -0.7221 | |
| 305 | F | A | -1.2682 | |
| 306 | E | A | -2.6081 | |
| 307 | R | A | -3.2192 | |
| 308 | T | A | 0.0000 | |
| 309 | E | A | -2.3289 | |
| 310 | G | A | -1.7456 | |
| 311 | L | A | -1.0431 | |
| 312 | N | A | 0.0000 | |
| 313 | Q | A | -1.7778 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | Y | A | -0.3632 | |
| 319 | N | A | -0.5638 | |
| 320 | R | A | -0.7506 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.8734 | |
| 333 | I | A | -0.5280 | |
| 334 | E | A | -0.6266 | |
| 335 | V | A | 0.7104 | |
| 336 | I | A | 0.5502 | |
| 337 | K | A | -0.8567 | |
| 338 | T | A | -0.5157 | |
| 339 | Q | A | -0.9048 | |
| 340 | T | A | -0.2649 | |
| 341 | C | A | -0.1955 | |
| 342 | T | A | -0.2645 | |
| 343 | P | A | -0.5119 | |
| 344 | A | A | -0.1884 | |
| 345 | P | A | -0.0408 | |
| 346 | N | A | -0.2762 | |
| 347 | V | A | 1.5930 | |
| 348 | Y | A | 1.5173 | |
| 349 | D | A | 0.1610 | |
| 350 | P | A | -0.0956 | |
| 351 | S | A | -0.0809 | |
| 352 | C | A | 0.0000 | |
| 353 | Y | A | 0.2281 | |
| 354 | V | A | 0.8923 | |
| 355 | T | A | 0.2749 | |
| 356 | S | A | -0.3197 | |
| 357 | K | A | -1.3289 | |
| 358 | K | A | -1.0685 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.5543 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.1213 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.5166 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | V | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | R | A | -0.6659 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.7225 | |
| 376 | L | A | -0.4653 | |
| 377 | T | A | -0.7060 | |
| 378 | P | A | -1.0447 | |
| 379 | E | A | -1.9523 | |
| 380 | I | A | 0.0000 | |
| 381 | L | A | -0.8096 | |
| 382 | A | A | -1.1254 | |
| 383 | E | A | 0.0000 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -1.6156 | |
| 386 | R | A | -1.4540 | |
| 387 | I | A | -0.6497 | |
| 388 | D | A | 0.0000 | |
| 389 | P | A | -0.9246 | |
| 390 | R | A | -0.7522 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.3923 | |
| 394 | D | A | -1.4163 | |
| 395 | A | A | -1.4256 | |
| 396 | K | A | -1.8409 | |
| 397 | L | A | 0.0000 | |
| 398 | P | A | 0.2636 | |
| 399 | F | A | 1.6711 | |
| 400 | V | A | 0.8100 | |
| 401 | P | A | 0.6701 | |
| 402 | P | A | 0.4579 | |
| 403 | V | A | 1.5779 | |
| 404 | V | A | 1.3655 | |
| 405 | R | A | -0.6805 | |
| 406 | P | A | -0.7261 | |
| 407 | D | A | -0.9832 | |
| 408 | P | A | -0.7275 | |
| 409 | Y | A | -0.4469 | |
| 410 | A | A | -0.5274 | |
| 411 | G | A | -0.6723 | |
| 412 | L | A | -0.6032 | |
| 413 | K | A | -1.7993 | |
| 414 | F | A | -1.0189 | |
| 415 | I | A | -1.0151 | |
| 416 | E | A | -2.1852 | |
| 417 | I | A | -1.7074 | |
| 418 | D | A | -2.7472 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.9587 | |
| 421 | D | A | -2.8993 | |
| 422 | K | A | -2.8437 | |
| 423 | L | A | -1.2600 | |
| 424 | S | A | -1.0910 | |
| 425 | S | A | -0.7398 | |
| 426 | D | A | -1.9091 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.4172 | |
| 429 | K | A | -3.3428 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.5105 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -3.0500 | |
| 435 | E | A | -2.0224 | |
| 436 | F | A | -1.1294 | |
| 437 | L | A | -0.6954 | |
| 438 | N | A | -1.9839 | |
| 439 | R | A | -2.1964 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine