| Chain sequence(s) |
A: ALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKVEQLSNMIVRSCKCS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:38)
[INFO] Main: Simulation completed successfully. (00:02:39)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.1009 | |
| 2 | L | A | -0.4796 | |
| 3 | D | A | -0.9716 | |
| 4 | T | A | -0.8600 | |
| 5 | N | A | -0.8669 | |
| 6 | Y | A | 0.7241 | |
| 7 | C | A | 0.0000 | |
| 8 | F | A | 0.4208 | |
| 9 | S | A | -0.0772 | |
| 10 | S | A | -0.5318 | |
| 11 | T | A | -1.1164 | |
| 12 | E | A | -2.0051 | |
| 13 | K | A | -2.5178 | |
| 14 | N | A | -1.2398 | |
| 15 | C | A | 0.0000 | |
| 16 | C | A | 0.0000 | |
| 17 | V | A | 0.0000 | |
| 18 | R | A | -0.7871 | |
| 19 | Q | A | -0.9587 | |
| 20 | L | A | 0.2403 | |
| 21 | Y | A | 0.1002 | |
| 22 | I | A | -1.1636 | |
| 23 | D | A | -2.6176 | |
| 24 | F | A | 0.0000 | |
| 25 | R | A | -3.8858 | |
| 26 | K | A | -3.6416 | |
| 27 | D | A | -2.7993 | |
| 28 | L | A | -1.3868 | |
| 29 | G | A | -2.1143 | |
| 30 | W | A | -1.4180 | |
| 31 | K | A | -1.5017 | |
| 32 | W | A | 0.1118 | |
| 33 | I | A | 0.0000 | |
| 34 | H | A | -1.4959 | |
| 35 | E | A | -1.9025 | |
| 36 | P | A | -1.8381 | |
| 37 | K | A | -2.9714 | |
| 38 | G | A | 0.0000 | |
| 39 | Y | A | 0.0000 | |
| 40 | H | A | -0.8131 | |
| 41 | A | A | 0.0000 | |
| 42 | N | A | 0.0000 | |
| 43 | F | A | 0.8950 | |
| 44 | C | A | 0.0000 | |
| 45 | L | A | 0.5574 | |
| 46 | G | A | -0.7142 | |
| 47 | P | A | -0.4010 | |
| 48 | C | A | 0.0000 | |
| 49 | P | A | 0.8474 | |
| 50 | Y | A | 1.6393 | |
| 51 | I | A | 2.3218 | |
| 52 | W | A | 0.9641 | |
| 53 | S | A | -0.0477 | |
| 54 | L | A | -0.5112 | |
| 55 | D | A | -2.1157 | |
| 56 | T | A | -1.1016 | |
| 57 | Q | A | -0.8462 | |
| 58 | Y | A | 0.7266 | |
| 59 | S | A | 0.0000 | |
| 60 | K | A | 0.4266 | |
| 61 | V | A | 1.9114 | |
| 62 | L | A | 1.4245 | |
| 63 | A | A | 0.0000 | |
| 64 | L | A | 0.6724 | |
| 65 | Y | A | 0.7753 | |
| 66 | N | A | -0.5478 | |
| 67 | Q | A | -1.2524 | |
| 68 | H | A | -1.6082 | |
| 69 | N | A | -1.6621 | |
| 70 | P | A | -1.3624 | |
| 71 | G | A | -1.1304 | |
| 72 | A | A | -0.8420 | |
| 73 | S | A | -0.3941 | |
| 74 | A | A | 0.0660 | |
| 75 | A | A | 0.3052 | |
| 76 | P | A | 0.7458 | |
| 77 | C | A | 0.7680 | |
| 78 | C | A | 0.0000 | |
| 79 | V | A | 0.4943 | |
| 80 | P | A | -0.5539 | |
| 81 | Q | A | -1.4940 | |
| 82 | A | A | -1.3215 | |
| 83 | L | A | -1.1393 | |
| 84 | E | A | -1.7397 | |
| 85 | P | A | -1.3604 | |
| 86 | L | A | 0.0000 | |
| 87 | P | A | -0.8900 | |
| 88 | I | A | 0.0000 | |
| 89 | V | A | -0.1775 | |
| 90 | Y | A | 0.0000 | |
| 91 | Y | A | 0.8518 | |
| 92 | V | A | 0.9554 | |
| 93 | G | A | -0.6112 | |
| 94 | R | A | -2.1505 | |
| 95 | K | A | -2.0880 | |
| 96 | P | A | -0.6772 | |
| 97 | K | A | -0.4183 | |
| 98 | V | A | 0.4664 | |
| 99 | E | A | -1.1631 | |
| 100 | Q | A | -1.6804 | |
| 101 | L | A | -0.9322 | |
| 102 | S | A | -1.2740 | |
| 103 | N | A | -1.6959 | |
| 104 | M | A | -0.8390 | |
| 105 | I | A | -0.6042 | |
| 106 | V | A | 0.0000 | |
| 107 | R | A | -2.3804 | |
| 108 | S | A | -1.3748 | |
| 109 | C | A | 0.0000 | |
| 110 | K | A | -0.9778 | |
| 111 | C | A | 0.0000 | |
| 112 | S | A | -0.5371 |