| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFSDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTEPQHEGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRSGPEGHPLPAAPPPSPLYVPPPPDSPYAVLPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9457 | |
| 2 | L | A | 1.9700 | |
| 3 | P | A | 0.6657 | |
| 4 | P | A | 0.3385 | |
| 5 | T | A | 0.0941 | |
| 6 | T | A | 0.0953 | |
| 7 | P | A | 0.1233 | |
| 8 | V | A | 1.2334 | |
| 9 | A | A | 0.0708 | |
| 10 | K | A | -1.0549 | |
| 11 | V | A | -0.2191 | |
| 12 | Q | A | -1.4455 | |
| 13 | S | A | -1.5749 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4308 | |
| 16 | E | A | -2.4459 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4582 | |
| 20 | P | A | 0.1269 | |
| 21 | T | A | 0.1799 | |
| 22 | S | A | -0.0958 | |
| 23 | L | A | 0.1159 | |
| 24 | F | A | -0.0280 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2734 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8947 | |
| 31 | R | A | -2.6878 | |
| 32 | L | A | -0.8050 | |
| 33 | L | A | 1.1529 | |
| 34 | T | A | 1.3558 | |
| 35 | V | A | 1.7973 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.1874 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.1369 | |
| 40 | S | A | -0.1027 | |
| 41 | D | A | 0.0575 | |
| 42 | I | A | 1.8191 | |
| 43 | V | A | 2.4999 | |
| 44 | V | A | 1.6959 | |
| 45 | N | A | -0.5329 | |
| 46 | G | A | -0.3396 | |
| 47 | K | A | -0.1121 | |
| 48 | V | A | 2.2172 | |
| 49 | L | A | 2.5700 | |
| 50 | V | A | 1.6888 | |
| 51 | P | A | 0.6494 | |
| 52 | K | A | -0.1233 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1347 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3794 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2621 | |
| 70 | K | A | -1.7807 | |
| 71 | F | A | -0.6260 | |
| 72 | A | A | -0.5678 | |
| 73 | L | A | -0.8558 | |
| 74 | P | A | -1.2647 | |
| 75 | Q | A | -2.5016 | |
| 76 | K | A | -3.1059 | |
| 77 | D | A | -2.9839 | |
| 78 | F | A | -1.6455 | |
| 79 | Y | A | -1.8827 | |
| 80 | D | A | -2.6788 | |
| 81 | P | A | -2.2974 | |
| 82 | E | A | -3.0454 | |
| 83 | K | A | -3.3841 | |
| 84 | E | A | -2.4498 | |
| 85 | R | A | -1.2887 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6583 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9670 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3650 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7002 | |
| 99 | G | A | -0.5398 | |
| 100 | P | A | -0.4153 | |
| 101 | L | A | 0.0217 | |
| 102 | G | A | -0.2431 | |
| 103 | K | A | -0.6813 | |
| 104 | G | A | -0.4730 | |
| 105 | T | A | -0.4610 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1320 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.3914 | |
| 110 | L | A | 0.2738 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1149 | |
| 113 | K | A | -0.5409 | |
| 114 | L | A | -1.2991 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2914 | |
| 117 | T | A | -0.8451 | |
| 118 | E | A | -1.7531 | |
| 119 | N | A | -2.1627 | |
| 120 | P | A | -1.9822 | |
| 121 | T | A | -1.6590 | |
| 122 | E | A | -2.4790 | |
| 123 | P | A | -1.4221 | |
| 124 | Q | A | -1.9810 | |
| 125 | H | A | -2.2814 | |
| 126 | E | A | -2.9067 | |
| 127 | G | A | -2.3267 | |
| 128 | A | A | -1.5822 | |
| 129 | D | A | -2.4632 | |
| 130 | D | A | -2.0442 | |
| 131 | R | A | -1.0770 | |
| 132 | V | A | 0.2463 | |
| 133 | A | A | 0.4230 | |
| 134 | F | A | 0.2630 | |
| 135 | S | A | -0.0804 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5125 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2552 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5559 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1878 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2299 | |
| 157 | D | A | 0.5786 | |
| 158 | L | A | 1.2242 | |
| 159 | A | A | 0.9861 | |
| 160 | P | A | 0.0983 | |
| 161 | P | A | 0.4503 | |
| 162 | C | A | 0.5121 | |
| 163 | P | A | 0.0139 | |
| 164 | G | A | -0.0740 | |
| 165 | L | A | 0.6072 | |
| 166 | P | A | -0.1015 | |
| 167 | P | A | -0.3349 | |
| 168 | G | A | -0.4470 | |
| 169 | A | A | -0.0192 | |
| 170 | C | A | 0.6497 | |
| 171 | P | A | 0.7635 | |
| 172 | P | A | 1.1278 | |
| 173 | I | A | 2.3742 | |
| 174 | Q | A | 1.2922 | |
| 175 | L | A | 1.6012 | |
| 176 | V | A | 0.9131 | |
| 177 | N | A | -0.2726 | |
| 178 | S | A | 0.0280 | |
| 179 | V | A | 0.4312 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3878 | |
| 182 | D | A | 0.0848 | |
| 183 | G | A | -0.1562 | |
| 184 | D | A | -0.5325 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.0873 | |
| 190 | F | A | 0.0511 | |
| 191 | G | A | -0.1111 | |
| 192 | N | A | -0.2565 | |
| 193 | M | A | -0.0903 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4150 | |
| 197 | E | A | -2.6291 | |
| 198 | L | A | -1.2278 | |
| 199 | Q | A | -2.5593 | |
| 200 | Q | A | -3.3225 | |
| 201 | D | A | -3.5851 | |
| 202 | R | A | -3.3383 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4399 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3601 | |
| 211 | S | A | -1.7188 | |
| 212 | T | A | -1.4355 | |
| 213 | R | A | -2.0778 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1518 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3618 | |
| 220 | L | A | 0.6293 | |
| 221 | K | A | -1.0639 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.7955 | |
| 224 | N | A | -1.4726 | |
| 225 | E | A | -1.2127 | |
| 226 | A | A | -0.6130 | |
| 227 | Y | A | -0.3596 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6386 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0772 | |
| 234 | F | A | 0.2548 | |
| 235 | G | A | -0.8167 | |
| 236 | R | A | -2.6043 | |
| 237 | R | A | -2.8798 | |
| 238 | E | A | -2.1731 | |
| 239 | Q | A | -0.2193 | |
| 240 | V | A | 1.3655 | |
| 241 | Y | A | 1.0849 | |
| 242 | A | A | 0.2059 | |
| 243 | R | A | -0.9476 | |
| 244 | H | A | -0.9139 | |
| 245 | F | A | 0.0943 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6454 | |
| 249 | S | A | -1.6120 | |
| 250 | G | A | -1.4069 | |
| 251 | P | A | -1.1924 | |
| 252 | E | A | -1.3433 | |
| 253 | G | A | -1.2586 | |
| 254 | H | A | -1.4313 | |
| 255 | P | A | -0.8625 | |
| 256 | L | A | 0.3795 | |
| 257 | P | A | 0.0389 | |
| 258 | A | A | 0.2137 | |
| 259 | A | A | 0.3807 | |
| 260 | P | A | -0.2519 | |
| 261 | P | A | -0.1654 | |
| 262 | P | A | 0.0471 | |
| 263 | S | A | 0.5688 | |
| 264 | P | A | 0.6861 | |
| 265 | L | A | 1.9236 | |
| 266 | Y | A | 1.7342 | |
| 267 | V | A | 1.9391 | |
| 268 | P | A | 1.0258 | |
| 269 | P | A | 0.4952 | |
| 270 | P | A | -0.6079 | |
| 271 | P | A | -0.8727 | |
| 272 | D | A | -1.6761 | |
| 273 | S | A | -0.4773 | |
| 274 | P | A | 0.0975 | |
| 275 | Y | A | 1.4644 | |
| 276 | A | A | 0.9791 | |
| 277 | V | A | 2.1123 | |
| 278 | L | A | 1.8163 | |
| 279 | P | A | 0.1260 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.3132 | |
| 282 | D | A | -0.9661 | |
| 283 | Y | A | 0.8610 | |
| 284 | F | A | 0.6715 | |
| 285 | G | A | 0.2365 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.7794 | |
| 291 | L | A | 1.6025 | |
| 292 | V | A | 0.6137 | |
| 293 | S | A | -0.1613 | |
| 294 | S | A | -0.9637 | |
| 295 | D | A | -1.8425 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1066 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6382 | |
| 301 | R | A | -1.8410 | |
| 302 | P | A | -0.9525 | |
| 303 | F | A | -0.1893 | |
| 304 | W | A | -0.5665 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0852 | |
| 307 | R | A | -2.8361 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2611 | |
| 310 | G | A | -1.2233 | |
| 311 | N | A | -1.2861 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8102 | |
| 319 | N | A | -0.9241 | |
| 320 | E | A | -1.0284 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3559 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0988 | |
| 333 | N | A | 0.5401 | |
| 334 | F | A | 1.7460 | |
| 335 | T | A | 0.8631 | |
| 336 | I | A | 0.4347 | |
| 337 | S | A | -0.8114 | |
| 338 | Q | A | -1.4237 | |
| 339 | Q | A | -1.0271 | |
| 340 | L | A | 0.6016 | |
| 341 | C | A | -0.0511 | |
| 342 | T | A | -0.4591 | |
| 343 | P | A | -1.1904 | |
| 344 | E | A | -1.7394 | |
| 345 | P | A | -0.7459 | |
| 346 | N | A | -0.7666 | |
| 347 | V | A | 1.2905 | |
| 348 | Y | A | 1.2237 | |
| 349 | D | A | 0.0281 | |
| 350 | P | A | -0.3354 | |
| 351 | S | A | -0.2648 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5325 | |
| 354 | K | A | -1.6378 | |
| 355 | N | A | -1.6914 | |
| 356 | Y | A | -0.0999 | |
| 357 | L | A | 0.6351 | |
| 358 | R | A | 0.9524 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3788 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0875 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0614 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6909 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3024 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.2972 | |
| 376 | L | A | -1.6862 | |
| 377 | D | A | -1.9596 | |
| 378 | P | A | -1.0267 | |
| 379 | G | A | -1.0056 | |
| 380 | V | A | -0.9231 | |
| 381 | L | A | -0.5216 | |
| 382 | A | A | -0.6483 | |
| 383 | H | A | -0.8125 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4000 | |
| 386 | T | A | -0.5533 | |
| 387 | M | A | -0.3024 | |
| 388 | N | A | -0.8644 | |
| 389 | P | A | -1.2441 | |
| 390 | T | A | -1.4386 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4347 | |
| 393 | E | A | -2.7578 | |
| 394 | N | A | -2.3726 | |
| 395 | W | A | -1.3590 | |
| 396 | N | A | -1.0803 | |
| 397 | L | A | -0.1705 | |
| 398 | G | A | 0.5332 | |
| 399 | F | A | 2.4213 | |
| 400 | V | A | 1.8249 | |
| 401 | P | A | 0.0529 | |
| 402 | P | A | -1.8325 | |
| 403 | K | A | -3.3118 | |
| 404 | E | A | -3.7662 | |
| 405 | R | A | -3.8945 | |
| 406 | E | A | -3.7806 | |
| 407 | D | A | -2.8655 | |
| 408 | P | A | -1.7610 | |
| 409 | Y | A | -0.9849 | |
| 410 | K | A | -2.1195 | |
| 411 | G | A | -0.6391 | |
| 412 | L | A | 0.6768 | |
| 413 | I | A | 1.5903 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3921 | |
| 416 | E | A | -1.6855 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9356 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0262 | |
| 421 | E | A | -2.7463 | |
| 422 | R | A | -2.5650 | |
| 423 | F | A | -1.2441 | |
| 424 | S | A | -1.4495 | |
| 425 | Q | A | -1.8820 | |
| 426 | D | A | -2.9764 | |
| 427 | L | A | -2.1674 | |
| 428 | D | A | -3.0418 | |
| 429 | Q | A | -2.7611 | |
| 430 | F | A | -1.6046 | |
| 431 | A | A | -1.1225 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2222 | |
| 435 | K | A | -1.0545 | |
| 436 | F | A | -0.0760 | |
| 437 | L | A | 0.8070 | |
| 438 | Y | A | 0.6462 | |
| 439 | Q | A | -0.3767 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine