Project name: query_structure

Status: done

Started: 2026-03-16 22:58:35
Settings
Chain sequence(s) A: CGESCVFIPCISTLLGCSCKNKVCYRNGVIP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:07)
Show buried residues

Minimal score value
-1.7935
Maximal score value
3.2408
Average score
0.5365
Total score value
16.6301

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.2230
2 G A -0.5015
3 E A 0.0002
4 S A 0.5564
5 C A 0.0000
6 V A 1.8152
7 F A 3.1008
8 I A 3.2408
9 P A 1.7245
10 C A 0.0000
11 I A 2.6438
12 S A 1.6085
13 T A 1.6255
14 L A 2.4223
15 L A 2.0240
16 G A 0.6218
17 C A 0.0000
18 S A 0.0245
19 C A 0.0737
20 K A -1.0369
21 N A -1.7935
22 K A -1.0110
23 V A -0.5550
24 C A 0.0000
25 Y A -0.2406
26 R A -0.6975
27 N A -1.0913
28 G A -0.3949
29 V A 1.2587
30 I A 0.8387
31 P A 0.1499
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Laboratory of Theory of Biopolymers 2018