| Chain sequence(s) |
A: CGESCVFIPCISTLLGCSCKNKVCYRNGVIP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | C | A | 0.2230 | |
| 2 | G | A | -0.5015 | |
| 3 | E | A | 0.0002 | |
| 4 | S | A | 0.5564 | |
| 5 | C | A | 0.0000 | |
| 6 | V | A | 1.8152 | |
| 7 | F | A | 3.1008 | |
| 8 | I | A | 3.2408 | |
| 9 | P | A | 1.7245 | |
| 10 | C | A | 0.0000 | |
| 11 | I | A | 2.6438 | |
| 12 | S | A | 1.6085 | |
| 13 | T | A | 1.6255 | |
| 14 | L | A | 2.4223 | |
| 15 | L | A | 2.0240 | |
| 16 | G | A | 0.6218 | |
| 17 | C | A | 0.0000 | |
| 18 | S | A | 0.0245 | |
| 19 | C | A | 0.0737 | |
| 20 | K | A | -1.0369 | |
| 21 | N | A | -1.7935 | |
| 22 | K | A | -1.0110 | |
| 23 | V | A | -0.5550 | |
| 24 | C | A | 0.0000 | |
| 25 | Y | A | -0.2406 | |
| 26 | R | A | -0.6975 | |
| 27 | N | A | -1.0913 | |
| 28 | G | A | -0.3949 | |
| 29 | V | A | 1.2587 | |
| 30 | I | A | 0.8387 | |
| 31 | P | A | 0.1499 |