| Chain sequence(s) |
A: CPLMVKVLDAVRGSPAINVAVHVFRRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEEIDDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSSTTTAVVTNP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 10 | C | A | -0.3014 | |
| 11 | P | A | 0.0000 | |
| 12 | L | A | 0.0000 | |
| 13 | M | A | -0.3385 | |
| 14 | V | A | 0.0000 | |
| 15 | K | A | -0.5919 | |
| 16 | V | A | 0.0000 | |
| 17 | L | A | 0.5065 | |
| 18 | D | A | 0.0000 | |
| 19 | A | A | 0.6865 | |
| 20 | V | A | 1.2102 | |
| 21 | R | A | -0.4670 | |
| 22 | G | A | -0.3832 | |
| 23 | S | A | -0.4007 | |
| 24 | P | A | -0.6325 | |
| 25 | A | A | 0.0000 | |
| 26 | I | A | -0.7758 | |
| 27 | N | A | -1.8803 | |
| 28 | V | A | 0.0000 | |
| 29 | A | A | -1.2348 | |
| 30 | V | A | 0.0000 | |
| 31 | H | A | -0.9090 | |
| 32 | V | A | 0.0000 | |
| 33 | F | A | -0.2781 | |
| 34 | R | A | -0.7304 | |
| 35 | K | A | -1.4752 | |
| 36 | A | A | -1.6687 | |
| 37 | A | A | -1.6716 | |
| 38 | D | A | -2.8217 | |
| 39 | D | A | -2.8568 | |
| 40 | T | A | -1.8491 | |
| 41 | W | A | -1.1408 | |
| 42 | E | A | -1.8754 | |
| 43 | P | A | -0.8759 | |
| 44 | F | A | -0.5148 | |
| 45 | A | A | -0.3335 | |
| 46 | S | A | -0.7507 | |
| 47 | G | A | -1.4456 | |
| 48 | K | A | -2.4080 | |
| 49 | T | A | 0.0000 | |
| 50 | S | A | -1.8193 | |
| 51 | E | A | -2.1364 | |
| 52 | S | A | -1.2067 | |
| 53 | G | A | 0.0000 | |
| 54 | E | A | -1.4103 | |
| 55 | L | A | 0.0000 | |
| 56 | H | A | -1.3785 | |
| 57 | G | A | -0.7847 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | 0.0000 | |
| 60 | T | A | -1.8251 | |
| 61 | E | A | -3.1185 | |
| 62 | E | A | -3.2544 | |
| 63 | E | A | -2.8055 | |
| 64 | F | A | 0.0000 | |
| 65 | V | A | -1.4829 | |
| 66 | E | A | -2.1358 | |
| 67 | G | A | -0.8118 | |
| 68 | I | A | 0.4582 | |
| 69 | Y | A | 0.0000 | |
| 70 | K | A | 0.2679 | |
| 71 | V | A | 0.0000 | |
| 72 | E | A | -0.9720 | |
| 73 | I | A | 0.0000 | |
| 74 | D | A | -1.8202 | |
| 75 | T | A | 0.0000 | |
| 76 | K | A | -1.8940 | |
| 77 | S | A | -1.5647 | |
| 78 | Y | A | 0.0000 | |
| 79 | W | A | 0.0000 | |
| 80 | K | A | -1.5980 | |
| 81 | A | A | -0.4937 | |
| 82 | L | A | 0.3193 | |
| 83 | G | A | -0.3802 | |
| 84 | I | A | -0.0558 | |
| 85 | S | A | -0.0864 | |
| 86 | P | A | 0.2533 | |
| 87 | F | A | 1.6358 | |
| 88 | H | A | -0.4817 | |
| 89 | E | A | -2.2460 | |
| 90 | H | A | -1.7227 | |
| 91 | A | A | 0.0000 | |
| 92 | E | A | -1.1113 | |
| 93 | V | A | 0.3836 | |
| 94 | V | A | 1.7278 | |
| 95 | F | A | 1.2457 | |
| 96 | T | A | -0.0713 | |
| 97 | A | A | 0.0000 | |
| 98 | N | A | 0.0000 | |
| 99 | D | A | -2.4322 | |
| 100 | S | A | -1.5716 | |
| 101 | G | A | -1.4610 | |
| 102 | P | A | -2.1857 | |
| 103 | R | A | -1.8339 | |
| 104 | R | A | -1.2665 | |
| 105 | Y | A | 0.0000 | |
| 106 | T | A | 0.4540 | |
| 107 | I | A | 0.0000 | |
| 108 | A | A | 0.2205 | |
| 109 | A | A | 0.0000 | |
| 110 | L | A | 0.9371 | |
| 111 | L | A | 0.0000 | |
| 112 | S | A | 1.1187 | |
| 113 | P | A | 1.0827 | |
| 114 | Y | A | 1.8643 | |
| 115 | S | A | 0.9933 | |
| 116 | Y | A | 0.8532 | |
| 117 | S | A | 0.1964 | |
| 118 | T | A | -0.0412 | |
| 119 | T | A | 0.4782 | |
| 120 | A | A | 1.2105 | |
| 121 | V | A | 2.0637 | |
| 122 | V | A | 1.3333 | |
| 123 | T | A | -0.2447 | |
| 124 | N | A | -1.6789 | |
| 125 | P | A | -1.1483 |