Project name: 1F41_Monomer

Status: done

Started: 2026-04-23 01:07:21
Settings
Chain sequence(s) A: CPLMVKVLDAVRGSPAINVAVHVFRRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEEIDDTKSYWKALGISPFHEHAEVVFTANDSGPRRYTIAALLSPYSYSSTTTAVVTNP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:09)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:09)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:09)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:09)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:21)
Show buried residues

Minimal score value
-3.2544
Maximal score value
2.0637
Average score
-0.5314
Total score value
-61.6426

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
10 C A -0.3014
11 P A 0.0000
12 L A 0.0000
13 M A -0.3385
14 V A 0.0000
15 K A -0.5919
16 V A 0.0000
17 L A 0.5065
18 D A 0.0000
19 A A 0.6865
20 V A 1.2102
21 R A -0.4670
22 G A -0.3832
23 S A -0.4007
24 P A -0.6325
25 A A 0.0000
26 I A -0.7758
27 N A -1.8803
28 V A 0.0000
29 A A -1.2348
30 V A 0.0000
31 H A -0.9090
32 V A 0.0000
33 F A -0.2781
34 R A -0.7304
35 K A -1.4752
36 A A -1.6687
37 A A -1.6716
38 D A -2.8217
39 D A -2.8568
40 T A -1.8491
41 W A -1.1408
42 E A -1.8754
43 P A -0.8759
44 F A -0.5148
45 A A -0.3335
46 S A -0.7507
47 G A -1.4456
48 K A -2.4080
49 T A 0.0000
50 S A -1.8193
51 E A -2.1364
52 S A -1.2067
53 G A 0.0000
54 E A -1.4103
55 L A 0.0000
56 H A -1.3785
57 G A -0.7847
58 L A 0.0000
59 T A 0.0000
60 T A -1.8251
61 E A -3.1185
62 E A -3.2544
63 E A -2.8055
64 F A 0.0000
65 V A -1.4829
66 E A -2.1358
67 G A -0.8118
68 I A 0.4582
69 Y A 0.0000
70 K A 0.2679
71 V A 0.0000
72 E A -0.9720
73 I A 0.0000
74 D A -1.8202
75 T A 0.0000
76 K A -1.8940
77 S A -1.5647
78 Y A 0.0000
79 W A 0.0000
80 K A -1.5980
81 A A -0.4937
82 L A 0.3193
83 G A -0.3802
84 I A -0.0558
85 S A -0.0864
86 P A 0.2533
87 F A 1.6358
88 H A -0.4817
89 E A -2.2460
90 H A -1.7227
91 A A 0.0000
92 E A -1.1113
93 V A 0.3836
94 V A 1.7278
95 F A 1.2457
96 T A -0.0713
97 A A 0.0000
98 N A 0.0000
99 D A -2.4322
100 S A -1.5716
101 G A -1.4610
102 P A -2.1857
103 R A -1.8339
104 R A -1.2665
105 Y A 0.0000
106 T A 0.4540
107 I A 0.0000
108 A A 0.2205
109 A A 0.0000
110 L A 0.9371
111 L A 0.0000
112 S A 1.1187
113 P A 1.0827
114 Y A 1.8643
115 S A 0.9933
116 Y A 0.8532
117 S A 0.1964
118 T A -0.0412
119 T A 0.4782
120 A A 1.2105
121 V A 2.0637
122 V A 1.3333
123 T A -0.2447
124 N A -1.6789
125 P A -1.1483
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Laboratory of Theory of Biopolymers 2018