| Chain sequence(s) |
A: GGHKGHK
C: GGHKGHK B: GGHKGHK E: GGHKGHK D: GGHKGHK G: GGHKGHK F: GGHKGHK I: GGHKGHK H: GGHKGHK K: GGHKGHK J: GGHKGHK M: GGHKGHK L: GGHKGHK O: GGHKGHK N: GGHKGHK Q: GGHKGHK P: GGHKGHK S: GGHKGHK R: GGHKGHK T: GGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:41)
[INFO] Main: Simulation completed successfully. (00:05:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -2.6220 | |
| 2 | G | A | -2.9782 | |
| 3 | H | A | -3.1529 | |
| 4 | K | A | -4.1103 | |
| 5 | G | A | -3.3299 | |
| 6 | H | A | -2.9407 | |
| 7 | K | A | -2.5960 | |
| 1 | G | B | -1.4440 | |
| 2 | G | B | -2.5877 | |
| 3 | H | B | -2.7984 | |
| 4 | K | B | -4.0900 | |
| 5 | G | B | -3.8403 | |
| 6 | H | B | -4.1809 | |
| 7 | K | B | -3.2346 | |
| 1 | G | C | -2.5491 | |
| 2 | G | C | -2.7975 | |
| 3 | H | C | -3.1357 | |
| 4 | K | C | -3.9487 | |
| 5 | G | C | -3.2304 | |
| 6 | H | C | -3.4659 | |
| 7 | K | C | -3.6486 | |
| 1 | G | D | -2.3978 | |
| 2 | G | D | -2.4054 | |
| 3 | H | D | -2.5503 | |
| 4 | K | D | -3.4359 | |
| 5 | G | D | -2.9263 | |
| 6 | H | D | -3.7743 | |
| 7 | K | D | -4.2769 | |
| 1 | G | E | -3.0793 | |
| 2 | G | E | -3.1578 | |
| 3 | H | E | -3.2407 | |
| 4 | K | E | -3.6233 | |
| 5 | G | E | -3.0763 | |
| 6 | H | E | -3.3595 | |
| 7 | K | E | -3.0226 | |
| 1 | G | F | -3.3846 | |
| 2 | G | F | -3.4581 | |
| 3 | H | F | -3.8844 | |
| 4 | K | F | -3.6846 | |
| 5 | G | F | -2.9075 | |
| 6 | H | F | -3.1525 | |
| 7 | K | F | -3.3825 | |
| 1 | G | G | -2.8247 | |
| 2 | G | G | -2.7515 | |
| 3 | H | G | -3.4370 | |
| 4 | K | G | -3.4773 | |
| 5 | G | G | -2.9359 | |
| 6 | H | G | -3.2574 | |
| 7 | K | G | -4.1246 | |
| 1 | G | H | -1.4118 | |
| 2 | G | H | -2.4413 | |
| 3 | H | H | -3.3696 | |
| 4 | K | H | -3.6731 | |
| 5 | G | H | -3.4047 | |
| 6 | H | H | -3.0002 | |
| 7 | K | H | -2.4794 | |
| 1 | G | I | -1.8218 | |
| 2 | G | I | -1.9032 | |
| 3 | H | I | -2.4399 | |
| 4 | K | I | -2.9423 | |
| 5 | G | I | -2.6122 | |
| 6 | H | I | -2.8753 | |
| 7 | K | I | -2.4686 | |
| 1 | G | J | -1.5642 | |
| 2 | G | J | -1.8611 | |
| 3 | H | J | -2.5515 | |
| 4 | K | J | -3.2927 | |
| 5 | G | J | -3.3928 | |
| 6 | H | J | -3.2351 | |
| 7 | K | J | -3.6534 | |
| 1 | G | K | -1.3401 | |
| 2 | G | K | -1.8935 | |
| 3 | H | K | -2.5986 | |
| 4 | K | K | -3.2809 | |
| 5 | G | K | -2.4930 | |
| 6 | H | K | -2.5889 | |
| 7 | K | K | -2.4916 | |
| 1 | G | L | -2.6074 | |
| 2 | G | L | -2.9759 | |
| 3 | H | L | -3.7230 | |
| 4 | K | L | -3.9937 | |
| 5 | G | L | -4.2997 | |
| 6 | H | L | -3.5985 | |
| 7 | K | L | -2.8422 | |
| 1 | G | M | -3.4796 | |
| 2 | G | M | 0.0000 | |
| 3 | H | M | -3.6223 | |
| 4 | K | M | -4.2729 | |
| 5 | G | M | -3.0715 | |
| 6 | H | M | -3.1645 | |
| 7 | K | M | -2.9968 | |
| 1 | G | N | -1.7096 | |
| 2 | G | N | -2.7889 | |
| 3 | H | N | -2.8406 | |
| 4 | K | N | -4.1023 | |
| 5 | G | N | -3.5558 | |
| 6 | H | N | -3.1575 | |
| 7 | K | N | -4.2411 | |
| 1 | G | O | -1.3595 | |
| 2 | G | O | -2.2007 | |
| 3 | H | O | -2.5961 | |
| 4 | K | O | -3.3057 | |
| 5 | G | O | -2.6496 | |
| 6 | H | O | -2.7941 | |
| 7 | K | O | -2.6504 | |
| 1 | G | P | -1.7715 | |
| 2 | G | P | -2.4178 | |
| 3 | H | P | -2.9166 | |
| 4 | K | P | -3.1784 | |
| 5 | G | P | -2.5454 | |
| 6 | H | P | -2.8083 | |
| 7 | K | P | -2.9485 | |
| 1 | G | Q | -2.3441 | |
| 2 | G | Q | -2.7477 | |
| 3 | H | Q | -3.6118 | |
| 4 | K | Q | -3.8793 | |
| 5 | G | Q | -3.2567 | |
| 6 | H | Q | -2.8734 | |
| 7 | K | Q | -2.7671 | |
| 1 | G | R | -2.7744 | |
| 2 | G | R | -3.1308 | |
| 3 | H | R | -3.3277 | |
| 4 | K | R | -3.3456 | |
| 5 | G | R | -2.8706 | |
| 6 | H | R | -2.7009 | |
| 7 | K | R | -2.6380 | |
| 1 | G | S | -3.7032 | |
| 2 | G | S | -3.8760 | |
| 3 | H | S | -3.5487 | |
| 4 | K | S | -3.7612 | |
| 5 | G | S | -3.2212 | |
| 6 | H | S | -2.6515 | |
| 7 | K | S | -2.7988 | |
| 1 | G | T | -3.1016 | |
| 2 | G | T | -3.1467 | |
| 3 | H | T | -3.4571 | |
| 4 | K | T | -3.7920 | |
| 5 | G | T | -3.5839 | |
| 6 | H | T | -3.0610 | |
| 7 | K | T | -2.7267 |