| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPVHEGADVRVNFSFDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRAGPDGHPLPDAPAPSPLYVPPPPGSPYAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9400 | |
| 2 | L | A | 1.9619 | |
| 3 | P | A | 0.6657 | |
| 4 | P | A | 0.3611 | |
| 5 | T | A | 0.1129 | |
| 6 | T | A | 0.1208 | |
| 7 | P | A | 0.1508 | |
| 8 | V | A | 1.2320 | |
| 9 | A | A | 0.0779 | |
| 10 | K | A | -1.0399 | |
| 11 | V | A | -0.2011 | |
| 12 | Q | A | -1.4370 | |
| 13 | S | A | -1.5795 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4482 | |
| 16 | E | A | -2.4531 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4547 | |
| 20 | P | A | 0.1267 | |
| 21 | T | A | 0.1848 | |
| 22 | S | A | -0.0875 | |
| 23 | L | A | 0.1200 | |
| 24 | F | A | -0.0057 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2902 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9005 | |
| 31 | R | A | -2.6813 | |
| 32 | L | A | -0.7987 | |
| 33 | L | A | 1.1556 | |
| 34 | T | A | 1.3661 | |
| 35 | V | A | 1.8246 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2569 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6285 | |
| 40 | K | A | -1.6939 | |
| 41 | D | A | -0.7142 | |
| 42 | I | A | 1.3377 | |
| 43 | V | A | 2.3011 | |
| 44 | V | A | 1.8479 | |
| 45 | N | A | -0.4495 | |
| 46 | G | A | -0.2944 | |
| 47 | K | A | -0.0271 | |
| 48 | V | A | 2.1361 | |
| 49 | V | A | 2.7660 | |
| 50 | V | A | 1.5610 | |
| 51 | P | A | 0.3586 | |
| 52 | K | A | -0.6833 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1494 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3812 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2691 | |
| 70 | K | A | -1.7893 | |
| 71 | F | A | -0.6399 | |
| 72 | A | A | -0.5761 | |
| 73 | L | A | -0.8545 | |
| 74 | P | A | -1.1971 | |
| 75 | Q | A | -2.5072 | |
| 76 | K | A | -3.1079 | |
| 77 | D | A | -2.9902 | |
| 78 | F | A | -1.6590 | |
| 79 | Y | A | -1.8913 | |
| 80 | D | A | -2.6930 | |
| 81 | P | A | -2.3046 | |
| 82 | E | A | -3.0492 | |
| 83 | K | A | -3.3915 | |
| 84 | E | A | -2.4605 | |
| 85 | R | A | -1.2941 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6514 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9689 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3588 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6954 | |
| 99 | G | A | -0.5393 | |
| 100 | P | A | -0.4067 | |
| 101 | L | A | 0.0379 | |
| 102 | G | A | -0.2068 | |
| 103 | K | A | -0.6061 | |
| 104 | G | A | -0.4503 | |
| 105 | T | A | -0.4516 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.0935 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.1481 | |
| 110 | L | A | -0.0027 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1731 | |
| 113 | K | A | -0.7201 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4278 | |
| 117 | T | A | -0.8372 | |
| 118 | E | A | -1.8042 | |
| 119 | N | A | -2.1890 | |
| 120 | P | A | -1.8622 | |
| 121 | T | A | -1.5497 | |
| 122 | E | A | -2.2133 | |
| 123 | P | A | -1.1687 | |
| 124 | V | A | -0.9857 | |
| 125 | H | A | -1.7259 | |
| 126 | E | A | -2.6536 | |
| 127 | G | A | -2.0537 | |
| 128 | A | A | -1.4448 | |
| 129 | D | A | -2.1771 | |
| 130 | V | A | -1.3816 | |
| 131 | R | A | -1.0473 | |
| 132 | V | A | -0.2675 | |
| 133 | N | A | -0.8781 | |
| 134 | F | A | -0.3567 | |
| 135 | S | A | -0.3531 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.7047 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5619 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2025 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1192 | |
| 157 | D | A | 0.2830 | |
| 158 | I | A | 0.8300 | |
| 159 | A | A | 0.1142 | |
| 160 | E | A | -1.4813 | |
| 161 | P | A | -0.2262 | |
| 162 | C | A | 0.1881 | |
| 163 | P | A | -0.1671 | |
| 164 | G | A | -0.0709 | |
| 165 | L | A | 0.6057 | |
| 166 | P | A | -0.1035 | |
| 167 | P | A | -0.3336 | |
| 168 | G | A | -0.4141 | |
| 169 | A | A | -0.0105 | |
| 170 | C | A | 0.7494 | |
| 171 | P | A | 0.5532 | |
| 172 | P | A | 0.8175 | |
| 173 | I | A | 2.0456 | |
| 174 | Q | A | 0.8503 | |
| 175 | L | A | 1.4494 | |
| 176 | V | A | 0.8313 | |
| 177 | N | A | -0.3084 | |
| 178 | S | A | 0.0202 | |
| 179 | V | A | 0.4298 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3844 | |
| 182 | D | A | 0.0840 | |
| 183 | G | A | -0.1537 | |
| 184 | D | A | -0.5370 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1406 | |
| 190 | F | A | 0.0579 | |
| 191 | G | A | -0.1067 | |
| 192 | N | A | -0.2692 | |
| 193 | M | A | -0.1383 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3885 | |
| 197 | E | A | -2.6018 | |
| 198 | L | A | -1.2147 | |
| 199 | Q | A | -2.5390 | |
| 200 | Q | A | -3.3041 | |
| 201 | D | A | -3.5723 | |
| 202 | R | A | -3.3206 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2254 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3372 | |
| 211 | S | A | -1.8690 | |
| 212 | T | A | -1.4332 | |
| 213 | R | A | -2.1041 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1587 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3340 | |
| 220 | L | A | 0.6250 | |
| 221 | K | A | -1.0693 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8783 | |
| 224 | N | A | -1.5986 | |
| 225 | E | A | -1.2229 | |
| 226 | A | A | -0.6128 | |
| 227 | Y | A | -0.4126 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6586 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1567 | |
| 234 | F | A | 0.0115 | |
| 235 | G | A | -0.9150 | |
| 236 | R | A | -2.6333 | |
| 237 | R | A | -2.8396 | |
| 238 | E | A | -2.0823 | |
| 239 | Q | A | -0.1151 | |
| 240 | V | A | 1.5277 | |
| 241 | Y | A | 1.2572 | |
| 242 | A | A | 0.1850 | |
| 243 | R | A | -1.1871 | |
| 244 | H | A | -1.0188 | |
| 245 | F | A | 0.0153 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | -0.2484 | |
| 248 | R | A | -0.7152 | |
| 249 | A | A | -1.3723 | |
| 250 | G | A | -1.3439 | |
| 251 | P | A | -1.1611 | |
| 252 | D | A | -1.4401 | |
| 253 | G | A | -1.2781 | |
| 254 | H | A | -1.4562 | |
| 255 | P | A | -1.3786 | |
| 256 | L | A | -0.4449 | |
| 257 | P | A | -0.8743 | |
| 258 | D | A | -1.8558 | |
| 259 | A | A | -0.5374 | |
| 260 | P | A | -0.5458 | |
| 261 | A | A | 0.1326 | |
| 262 | P | A | 0.2816 | |
| 263 | S | A | 0.4193 | |
| 264 | P | A | 0.7346 | |
| 265 | L | A | 1.8933 | |
| 266 | Y | A | 1.5793 | |
| 267 | V | A | 1.9802 | |
| 268 | P | A | 0.6632 | |
| 269 | P | A | 0.5027 | |
| 270 | P | A | -0.1874 | |
| 271 | P | A | -0.5011 | |
| 272 | G | A | -0.3165 | |
| 273 | S | A | 0.2074 | |
| 274 | P | A | 0.4677 | |
| 275 | Y | A | 1.3736 | |
| 276 | A | A | 0.9840 | |
| 277 | V | A | 1.6261 | |
| 278 | R | A | 0.4014 | |
| 279 | P | A | -0.3540 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5718 | |
| 282 | D | A | -0.8046 | |
| 283 | Y | A | 0.8917 | |
| 284 | F | A | 0.7013 | |
| 285 | G | A | 0.2077 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9242 | |
| 291 | L | A | 1.6228 | |
| 292 | V | A | 0.6376 | |
| 293 | S | A | -0.1621 | |
| 294 | S | A | -0.9639 | |
| 295 | D | A | -1.8426 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0983 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6485 | |
| 301 | R | A | -1.8603 | |
| 302 | P | A | -0.9810 | |
| 303 | F | A | -0.2200 | |
| 304 | W | A | -0.5662 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0836 | |
| 307 | R | A | -2.9317 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7933 | |
| 310 | G | A | -1.4304 | |
| 311 | N | A | -1.3730 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7527 | |
| 319 | N | A | -0.8345 | |
| 320 | E | A | -1.0282 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3395 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0785 | |
| 333 | N | A | 0.5457 | |
| 334 | F | A | 1.7296 | |
| 335 | T | A | 0.7338 | |
| 336 | I | A | 0.4131 | |
| 337 | S | A | -1.0179 | |
| 338 | Q | A | -1.8033 | |
| 339 | Q | A | -1.4491 | |
| 340 | L | A | 0.5963 | |
| 341 | C | A | 0.2227 | |
| 342 | T | A | -0.2381 | |
| 343 | P | A | -0.6124 | |
| 344 | E | A | -1.6276 | |
| 345 | P | A | -1.1011 | |
| 346 | N | A | -0.8712 | |
| 347 | V | A | 0.9066 | |
| 348 | Y | A | 1.0869 | |
| 349 | D | A | -0.2278 | |
| 350 | P | A | -0.4320 | |
| 351 | S | A | -0.3448 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.9206 | |
| 354 | K | A | -1.8203 | |
| 355 | N | A | -1.7942 | |
| 356 | Y | A | -0.1189 | |
| 357 | L | A | 0.6295 | |
| 358 | R | A | 0.9580 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3882 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0797 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0388 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6849 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3056 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3024 | |
| 376 | L | A | -1.6933 | |
| 377 | D | A | -1.9547 | |
| 378 | P | A | -1.0206 | |
| 379 | G | A | -1.0022 | |
| 380 | V | A | -0.9216 | |
| 381 | L | A | -0.5162 | |
| 382 | A | A | -0.6474 | |
| 383 | H | A | -0.8066 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4064 | |
| 386 | T | A | -0.5565 | |
| 387 | M | A | -0.3047 | |
| 388 | N | A | -0.8655 | |
| 389 | P | A | -1.2262 | |
| 390 | T | A | -1.4103 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4075 | |
| 393 | E | A | -2.7462 | |
| 394 | N | A | -2.4531 | |
| 395 | W | A | -1.3464 | |
| 396 | N | A | -1.1579 | |
| 397 | L | A | -0.2180 | |
| 398 | G | A | 0.5185 | |
| 399 | F | A | 2.3952 | |
| 400 | V | A | 1.7992 | |
| 401 | P | A | 0.0380 | |
| 402 | P | A | -1.8238 | |
| 403 | K | A | -3.3008 | |
| 404 | E | A | -3.8144 | |
| 405 | R | A | -3.8271 | |
| 406 | E | A | -3.7546 | |
| 407 | D | A | -2.8654 | |
| 408 | P | A | -1.7613 | |
| 409 | Y | A | -0.9905 | |
| 410 | K | A | -2.1063 | |
| 411 | G | A | -0.6436 | |
| 412 | L | A | 0.6752 | |
| 413 | I | A | 1.5922 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3866 | |
| 416 | E | A | -1.6870 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9572 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0672 | |
| 421 | E | A | -2.8042 | |
| 422 | R | A | -2.6702 | |
| 423 | F | A | -1.2889 | |
| 424 | S | A | -1.4486 | |
| 425 | Q | A | -1.7934 | |
| 426 | D | A | -2.8633 | |
| 427 | L | A | -1.9660 | |
| 428 | D | A | -2.7506 | |
| 429 | Q | A | -2.6014 | |
| 430 | F | A | -1.4223 | |
| 431 | A | A | -0.9068 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6199 | |
| 435 | K | A | -0.7354 | |
| 436 | F | A | 0.1307 | |
| 437 | L | A | 1.0139 | |
| 438 | Y | A | 0.8129 | |
| 439 | Q | A | -0.2844 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine