| Chain sequence(s) |
A: LANFLVHSGNNFGAILSSTNVGSNTY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:06)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 12 | L | A | 1.8431 | |
| 13 | A | A | 1.3677 | |
| 14 | N | A | 0.3707 | |
| 15 | F | A | 2.5756 | |
| 16 | L | A | 2.7645 | |
| 17 | V | A | 1.9174 | |
| 18 | H | A | -0.5597 | |
| 19 | S | A | -1.0035 | |
| 20 | G | A | -1.7009 | |
| 21 | N | A | -1.9140 | |
| 22 | N | A | -1.0296 | |
| 23 | F | A | 1.0198 | |
| 24 | G | A | 0.6588 | |
| 25 | A | A | 1.4494 | |
| 26 | I | A | 2.8614 | |
| 27 | L | A | 2.3588 | |
| 28 | S | A | 0.7075 | |
| 29 | S | A | -0.1026 | |
| 30 | T | A | 0.1605 | |
| 31 | N | A | -0.4366 | |
| 32 | V | A | 1.0034 | |
| 33 | G | A | -0.2926 | |
| 34 | S | A | -0.7040 | |
| 35 | N | A | -1.2051 | |
| 36 | T | A | -0.0987 | |
| 37 | Y | A | 0.9802 |