| Chain sequence(s) |
A: GGLGRCIYNCMNSGGGLSFIQCKTMCY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4370 | |
| 2 | G | A | -0.0451 | |
| 3 | L | A | 0.6931 | |
| 4 | G | A | -0.8322 | |
| 5 | R | A | -1.7615 | |
| 6 | C | A | -0.2832 | |
| 7 | I | A | 0.0343 | |
| 8 | Y | A | -0.6285 | |
| 9 | N | A | -1.6586 | |
| 10 | C | A | -0.5227 | |
| 11 | M | A | 0.0650 | |
| 12 | N | A | -1.3257 | |
| 13 | S | A | -1.1625 | |
| 14 | G | A | -1.0265 | |
| 15 | G | A | -0.3846 | |
| 16 | G | A | -0.0608 | |
| 17 | L | A | 1.5139 | |
| 18 | S | A | 1.2274 | |
| 19 | F | A | 1.6772 | |
| 20 | I | A | 2.0656 | |
| 21 | Q | A | 0.8969 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | 0.3058 | |
| 24 | T | A | 0.9255 | |
| 25 | M | A | 1.5792 | |
| 26 | C | A | 1.1530 | |
| 27 | Y | A | 1.7048 |