Project name: query_structure

Status: done

Started: 2026-03-16 23:21:12
Settings
Chain sequence(s) A: GGLGRCIYNCMNSGGGLSFIQCKTMCY
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:13)
Show buried residues

Minimal score value
-1.7615
Maximal score value
2.0656
Average score
0.1375
Total score value
3.7128

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4370
2 G A -0.0451
3 L A 0.6931
4 G A -0.8322
5 R A -1.7615
6 C A -0.2832
7 I A 0.0343
8 Y A -0.6285
9 N A -1.6586
10 C A -0.5227
11 M A 0.0650
12 N A -1.3257
13 S A -1.1625
14 G A -1.0265
15 G A -0.3846
16 G A -0.0608
17 L A 1.5139
18 S A 1.2274
19 F A 1.6772
20 I A 2.0656
21 Q A 0.8969
22 C A 0.0000
23 K A 0.3058
24 T A 0.9255
25 M A 1.5792
26 C A 1.1530
27 Y A 1.7048
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Laboratory of Theory of Biopolymers 2018