Project name: AF-P37840_7a95c5b8265016a [mutate: AT53A]

Status: done

Started: 2026-06-01 08:49:14
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Chain sequence(s) A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKSEEGSPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Mutated residues AT53A
Energy difference between WT (input) and mutated protein (by FoldX) 0.421459 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       FoldX:    Building mutant model                                                       (00:00:53)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:55)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:46)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:47)
Show buried residues

Minimal score value
-3.684
Maximal score value
3.4018
Average score
-0.7451
Total score value
-104.3109

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.2429
2 D A -0.0100
3 V A 1.7776
4 F A 2.2118
5 M A 0.8571
6 K A -1.0456
7 G A -0.6677
8 L A -0.4839
9 S A -1.5601
10 K A -2.6034
11 A A -1.6053
12 K A -2.1857
13 E A -2.1529
14 G A -0.9413
15 V A 0.6377
16 V A 0.5357
17 A A -0.6878
18 A A -0.8090
19 A A -1.1252
20 E A -2.7066
21 K A -2.9113
22 T A -2.2645
23 K A -3.2004
24 Q A -3.0980
25 G A -1.8458
26 V A -0.2687
27 A A -1.3347
28 E A -2.5030
29 A A -1.6287
30 A A -1.5150
31 G A -2.3315
32 K A -3.1031
33 T A -1.8385
34 K A -2.3034
35 E A -1.7768
36 G A 0.0646
37 V A 1.6833
38 L A 1.7127
39 Y A 1.8519
40 V A 1.9938
41 G A 0.6075
42 S A -0.2826
43 K A -1.2662
44 T A -0.9748
45 K A -2.0104
46 E A -2.3051
47 G A -1.1369
48 V A 1.0874
49 V A 1.4071
50 H A 0.1619
51 G A 1.0323
52 V A 2.3558
53 T A 0.9019 mutated: AT53A
54 T A 0.1772
55 V A 0.7308
56 A A -1.0647
57 E A -2.9474
58 K A -3.0444
59 T A -2.4159
60 K A -3.3080
61 E A -3.6840
62 Q A -2.5154
63 V A -0.3230
64 T A -0.9117
65 N A -0.9589
66 V A 1.5263
67 G A 1.3333
68 G A 0.9930
69 A A 1.8718
70 V A 3.1483
71 V A 3.4018
72 T A 2.1099
73 G A 2.0944
74 V A 3.0165
75 T A 1.4824
76 A A 0.9235
77 V A 1.6291
78 A A 0.4362
79 Q A -1.0046
80 K A -1.6133
81 T A -0.5676
82 V A 0.2884
83 E A -1.6365
84 G A -0.7327
85 A A 0.1471
86 G A -0.0296
87 S A 0.3027
88 I A 1.9311
89 A A 1.1979
90 A A 1.1161
91 A A 1.0172
92 T A 1.1204
93 G A 0.7039
94 F A 1.7988
95 V A 0.4287
96 K A -1.9187
97 K A -2.7840
98 D A -3.2389
99 Q A -2.4407
100 L A -0.6922
101 G A -1.7543
102 K A -2.5342
103 S A -2.4208
104 E A -3.5236
105 E A -3.3859
106 G A -2.3246
107 S A -2.0388
108 P A -1.9492
109 Q A -2.1941
110 E A -1.8427
111 G A -0.6105
112 I A 0.8194
113 L A 0.9009
114 E A -0.9854
115 D A -1.1813
116 M A -0.0075
117 P A -0.2989
118 V A 0.2473
119 D A -2.1804
120 P A -2.2639
121 D A -3.4454
122 N A -3.0805
123 E A -3.1103
124 A A -1.3561
125 Y A -0.0930
126 E A -1.0333
127 M A 0.0492
128 P A -0.9962
129 S A -1.9094
130 E A -2.5436
131 E A -2.8674
132 G A -1.9756
133 Y A -0.6972
134 Q A -1.7345
135 D A -1.9995
136 Y A -0.9296
137 E A -2.5289
138 P A -1.8737
139 E A -2.2307
140 A A -1.1604
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Laboratory of Theory of Biopolymers 2018