| Chain sequence(s) |
A: MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKSEEGSPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | AT53A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.421459 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:53)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:55)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:46)
[INFO] Main: Simulation completed successfully. (00:01:47)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2429 | |
| 2 | D | A | -0.0100 | |
| 3 | V | A | 1.7776 | |
| 4 | F | A | 2.2118 | |
| 5 | M | A | 0.8571 | |
| 6 | K | A | -1.0456 | |
| 7 | G | A | -0.6677 | |
| 8 | L | A | -0.4839 | |
| 9 | S | A | -1.5601 | |
| 10 | K | A | -2.6034 | |
| 11 | A | A | -1.6053 | |
| 12 | K | A | -2.1857 | |
| 13 | E | A | -2.1529 | |
| 14 | G | A | -0.9413 | |
| 15 | V | A | 0.6377 | |
| 16 | V | A | 0.5357 | |
| 17 | A | A | -0.6878 | |
| 18 | A | A | -0.8090 | |
| 19 | A | A | -1.1252 | |
| 20 | E | A | -2.7066 | |
| 21 | K | A | -2.9113 | |
| 22 | T | A | -2.2645 | |
| 23 | K | A | -3.2004 | |
| 24 | Q | A | -3.0980 | |
| 25 | G | A | -1.8458 | |
| 26 | V | A | -0.2687 | |
| 27 | A | A | -1.3347 | |
| 28 | E | A | -2.5030 | |
| 29 | A | A | -1.6287 | |
| 30 | A | A | -1.5150 | |
| 31 | G | A | -2.3315 | |
| 32 | K | A | -3.1031 | |
| 33 | T | A | -1.8385 | |
| 34 | K | A | -2.3034 | |
| 35 | E | A | -1.7768 | |
| 36 | G | A | 0.0646 | |
| 37 | V | A | 1.6833 | |
| 38 | L | A | 1.7127 | |
| 39 | Y | A | 1.8519 | |
| 40 | V | A | 1.9938 | |
| 41 | G | A | 0.6075 | |
| 42 | S | A | -0.2826 | |
| 43 | K | A | -1.2662 | |
| 44 | T | A | -0.9748 | |
| 45 | K | A | -2.0104 | |
| 46 | E | A | -2.3051 | |
| 47 | G | A | -1.1369 | |
| 48 | V | A | 1.0874 | |
| 49 | V | A | 1.4071 | |
| 50 | H | A | 0.1619 | |
| 51 | G | A | 1.0323 | |
| 52 | V | A | 2.3558 | |
| 53 | T | A | 0.9019 | mutated: AT53A |
| 54 | T | A | 0.1772 | |
| 55 | V | A | 0.7308 | |
| 56 | A | A | -1.0647 | |
| 57 | E | A | -2.9474 | |
| 58 | K | A | -3.0444 | |
| 59 | T | A | -2.4159 | |
| 60 | K | A | -3.3080 | |
| 61 | E | A | -3.6840 | |
| 62 | Q | A | -2.5154 | |
| 63 | V | A | -0.3230 | |
| 64 | T | A | -0.9117 | |
| 65 | N | A | -0.9589 | |
| 66 | V | A | 1.5263 | |
| 67 | G | A | 1.3333 | |
| 68 | G | A | 0.9930 | |
| 69 | A | A | 1.8718 | |
| 70 | V | A | 3.1483 | |
| 71 | V | A | 3.4018 | |
| 72 | T | A | 2.1099 | |
| 73 | G | A | 2.0944 | |
| 74 | V | A | 3.0165 | |
| 75 | T | A | 1.4824 | |
| 76 | A | A | 0.9235 | |
| 77 | V | A | 1.6291 | |
| 78 | A | A | 0.4362 | |
| 79 | Q | A | -1.0046 | |
| 80 | K | A | -1.6133 | |
| 81 | T | A | -0.5676 | |
| 82 | V | A | 0.2884 | |
| 83 | E | A | -1.6365 | |
| 84 | G | A | -0.7327 | |
| 85 | A | A | 0.1471 | |
| 86 | G | A | -0.0296 | |
| 87 | S | A | 0.3027 | |
| 88 | I | A | 1.9311 | |
| 89 | A | A | 1.1979 | |
| 90 | A | A | 1.1161 | |
| 91 | A | A | 1.0172 | |
| 92 | T | A | 1.1204 | |
| 93 | G | A | 0.7039 | |
| 94 | F | A | 1.7988 | |
| 95 | V | A | 0.4287 | |
| 96 | K | A | -1.9187 | |
| 97 | K | A | -2.7840 | |
| 98 | D | A | -3.2389 | |
| 99 | Q | A | -2.4407 | |
| 100 | L | A | -0.6922 | |
| 101 | G | A | -1.7543 | |
| 102 | K | A | -2.5342 | |
| 103 | S | A | -2.4208 | |
| 104 | E | A | -3.5236 | |
| 105 | E | A | -3.3859 | |
| 106 | G | A | -2.3246 | |
| 107 | S | A | -2.0388 | |
| 108 | P | A | -1.9492 | |
| 109 | Q | A | -2.1941 | |
| 110 | E | A | -1.8427 | |
| 111 | G | A | -0.6105 | |
| 112 | I | A | 0.8194 | |
| 113 | L | A | 0.9009 | |
| 114 | E | A | -0.9854 | |
| 115 | D | A | -1.1813 | |
| 116 | M | A | -0.0075 | |
| 117 | P | A | -0.2989 | |
| 118 | V | A | 0.2473 | |
| 119 | D | A | -2.1804 | |
| 120 | P | A | -2.2639 | |
| 121 | D | A | -3.4454 | |
| 122 | N | A | -3.0805 | |
| 123 | E | A | -3.1103 | |
| 124 | A | A | -1.3561 | |
| 125 | Y | A | -0.0930 | |
| 126 | E | A | -1.0333 | |
| 127 | M | A | 0.0492 | |
| 128 | P | A | -0.9962 | |
| 129 | S | A | -1.9094 | |
| 130 | E | A | -2.5436 | |
| 131 | E | A | -2.8674 | |
| 132 | G | A | -1.9756 | |
| 133 | Y | A | -0.6972 | |
| 134 | Q | A | -1.7345 | |
| 135 | D | A | -1.9995 | |
| 136 | Y | A | -0.9296 | |
| 137 | E | A | -2.5289 | |
| 138 | P | A | -1.8737 | |
| 139 | E | A | -2.2307 | |
| 140 | A | A | -1.1604 |