| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASAYYVKWFRQAPGKGRELVASPASPGRFTISRDNAKRMVYLQMNSLRAEDTAVYYCAASPDSSGTVYWGQGTQVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:08)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.9293 | |
| 2 | V | A | -0.8230 | |
| 3 | Q | A | -1.2536 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | -0.0091 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.8113 | |
| 8 | G | A | -0.9607 | |
| 9 | G | A | -0.7883 | |
| 10 | G | A | -0.0639 | |
| 11 | L | A | 0.9998 | |
| 12 | V | A | -0.0777 | |
| 13 | Q | A | -1.3525 | |
| 14 | P | A | -1.7007 | |
| 15 | G | A | -1.5241 | |
| 16 | G | A | -1.1812 | |
| 17 | S | A | -1.4306 | |
| 18 | L | A | -1.0347 | |
| 19 | R | A | -2.1113 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5211 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.8754 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.8909 | |
| 26 | A | A | 0.0000 | |
| 27 | Y | A | 1.3743 | |
| 28 | Y | A | 1.6534 | |
| 29 | V | A | 0.0000 | |
| 30 | K | A | -0.0304 | |
| 31 | W | A | 0.0000 | |
| 32 | F | A | -0.1114 | |
| 33 | R | A | -1.0944 | |
| 34 | Q | A | -2.0309 | |
| 35 | A | A | -1.9027 | |
| 36 | P | A | -1.3362 | |
| 37 | G | A | -1.7785 | |
| 38 | K | A | -2.9419 | |
| 39 | G | A | -2.5981 | |
| 40 | R | A | -2.7320 | |
| 41 | E | A | -1.7997 | |
| 42 | L | A | 0.1891 | |
| 43 | V | A | -0.0120 | |
| 44 | A | A | 0.0000 | |
| 45 | S | A | 0.0000 | |
| 46 | P | A | -0.2698 | |
| 47 | A | A | -0.2891 | |
| 48 | S | A | -0.3978 | |
| 49 | P | A | -0.7642 | |
| 50 | G | A | -1.1818 | |
| 51 | R | A | -1.5392 | |
| 52 | F | A | 0.0000 | |
| 53 | T | A | -0.8677 | |
| 54 | I | A | -0.4908 | |
| 55 | S | A | -0.5806 | |
| 56 | R | A | -1.1765 | |
| 57 | D | A | -2.2367 | |
| 58 | N | A | -2.5889 | |
| 59 | A | A | -2.1114 | |
| 60 | K | A | -3.1253 | |
| 61 | R | A | -3.0487 | |
| 62 | M | A | -1.6590 | |
| 63 | V | A | 0.0000 | |
| 64 | Y | A | -0.5834 | |
| 65 | L | A | 0.0000 | |
| 66 | Q | A | -1.4342 | |
| 67 | M | A | 0.0000 | |
| 68 | N | A | -1.7752 | |
| 69 | S | A | -1.4783 | |
| 70 | L | A | 0.0000 | |
| 71 | R | A | -2.7550 | |
| 72 | A | A | -1.9506 | |
| 73 | E | A | -2.3893 | |
| 74 | D | A | 0.0000 | |
| 75 | T | A | -0.9906 | |
| 76 | A | A | 0.0000 | |
| 77 | V | A | -0.6179 | |
| 78 | Y | A | 0.0000 | |
| 79 | Y | A | -0.2970 | |
| 80 | C | A | 0.0000 | |
| 81 | A | A | 0.0000 | |
| 82 | A | A | 0.0000 | |
| 83 | S | A | -0.0065 | |
| 84 | P | A | -0.4514 | |
| 85 | D | A | -2.0757 | |
| 86 | S | A | -1.4123 | |
| 87 | S | A | -1.0335 | |
| 88 | G | A | -0.8394 | |
| 89 | T | A | -0.1778 | |
| 90 | V | A | 0.9167 | |
| 91 | Y | A | 0.7506 | |
| 92 | W | A | 0.5127 | |
| 93 | G | A | -0.2950 | |
| 94 | Q | A | -0.9402 | |
| 95 | G | A | -0.6861 | |
| 96 | T | A | -0.8580 | |
| 97 | Q | A | -1.0506 | |
| 98 | V | A | 0.0000 | |
| 99 | T | A | -0.3531 | |
| 100 | V | A | 0.0000 | |
| 101 | S | A | -0.7920 | |
| 102 | S | A | -0.5011 |