| Chain sequence(s) |
A: VLSEGEWQLVLHVWAKVEADVAGHGQDILIRLFKSHPETLEKFDRFKHLKTEAEMKASEDLKKHGVTVLTALGAILK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:41)
[INFO] Main: Simulation completed successfully. (00:02:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 1.9933 | |
| 2 | L | A | 1.0423 | |
| 3 | S | A | -0.6810 | |
| 4 | E | A | -2.0321 | |
| 5 | G | A | -1.8172 | |
| 6 | E | A | -1.5145 | |
| 7 | W | A | -0.4551 | |
| 8 | Q | A | -1.1036 | |
| 9 | L | A | 0.3830 | |
| 10 | V | A | 0.6861 | |
| 11 | L | A | -0.0605 | |
| 12 | H | A | -0.3371 | |
| 13 | V | A | 0.4989 | |
| 14 | W | A | 0.0000 | |
| 15 | A | A | -0.7364 | |
| 16 | K | A | -1.7894 | |
| 17 | V | A | -1.0547 | |
| 18 | E | A | -1.2306 | |
| 19 | A | A | -1.2708 | |
| 20 | D | A | -1.4937 | |
| 21 | V | A | -0.9699 | |
| 22 | A | A | -1.2050 | |
| 23 | G | A | -1.4224 | |
| 24 | H | A | -1.3090 | |
| 25 | G | A | 0.0000 | |
| 26 | Q | A | 0.0000 | |
| 27 | D | A | -2.5222 | |
| 28 | I | A | -1.0103 | |
| 29 | L | A | 0.0000 | |
| 30 | I | A | 0.0000 | |
| 31 | R | A | -2.8173 | |
| 32 | L | A | -1.5032 | |
| 33 | F | A | 0.0000 | |
| 34 | K | A | -3.1520 | |
| 35 | S | A | -2.0532 | |
| 36 | H | A | -2.3907 | |
| 37 | P | A | -2.9139 | |
| 38 | E | A | -2.9093 | |
| 39 | T | A | -2.3466 | |
| 40 | L | A | 0.0000 | |
| 41 | E | A | -4.1311 | |
| 42 | K | A | -3.5397 | |
| 43 | F | A | -2.8697 | |
| 44 | D | A | -3.7627 | |
| 45 | R | A | -3.5229 | |
| 46 | F | A | 0.0000 | |
| 47 | K | A | -3.7862 | |
| 48 | H | A | -2.8818 | |
| 49 | L | A | 0.0000 | |
| 50 | K | A | -2.9030 | |
| 51 | T | A | -2.4058 | |
| 52 | E | A | -3.1445 | |
| 53 | A | A | -1.8821 | |
| 54 | E | A | -2.5864 | |
| 55 | M | A | 0.0000 | |
| 56 | K | A | -3.0984 | |
| 57 | A | A | -1.9401 | |
| 58 | S | A | -2.4371 | |
| 59 | E | A | -3.2524 | |
| 60 | D | A | -2.8239 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -2.8101 | |
| 63 | K | A | -2.5828 | |
| 64 | H | A | -1.4334 | |
| 65 | G | A | 0.0000 | |
| 66 | V | A | -0.2713 | |
| 67 | T | A | 0.1203 | |
| 68 | V | A | 0.8907 | |
| 69 | L | A | 0.0000 | |
| 70 | T | A | 0.8002 | |
| 71 | A | A | 1.1892 | |
| 72 | L | A | 1.3878 | |
| 73 | G | A | 0.0000 | |
| 74 | A | A | 0.7106 | |
| 75 | I | A | 1.7830 | |
| 76 | L | A | 0.7097 | |
| 77 | K | A | -0.8129 |