| Chain sequence(s) |
A: MGSSHHHHHHSSGLVPRGSHMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:16)
[INFO] Main: Simulation completed successfully. (00:01:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7483 | |
| 2 | G | A | -0.2473 | |
| 3 | S | A | -0.6671 | |
| 4 | S | A | -1.1947 | |
| 5 | H | A | -2.0784 | |
| 6 | H | A | -2.4208 | |
| 7 | H | A | -2.6375 | |
| 8 | H | A | -2.6372 | |
| 9 | H | A | -2.4263 | |
| 10 | H | A | -2.0871 | |
| 11 | S | A | -1.1378 | |
| 12 | S | A | -0.2912 | |
| 13 | G | A | 0.4738 | |
| 14 | L | A | 1.7679 | |
| 15 | V | A | 1.6735 | |
| 16 | P | A | -0.0860 | |
| 17 | R | A | -1.6922 | |
| 18 | G | A | -1.4380 | |
| 19 | S | A | -1.1950 | |
| 20 | H | A | -1.2854 | |
| 21 | M | A | -0.4573 | |
| 22 | S | A | -1.6513 | |
| 23 | R | A | -3.0588 | |
| 24 | R | A | -3.1355 | |
| 25 | N | A | -2.3756 | |
| 26 | T | A | -1.4011 | |
| 27 | D | A | -1.3444 | |
| 28 | A | A | -0.5348 | |
| 29 | I | A | 0.9565 | |
| 30 | T | A | 0.1285 | |
| 31 | I | A | 0.0000 | |
| 32 | H | A | -0.8436 | |
| 33 | S | A | -0.8479 | |
| 34 | I | A | 0.0000 | |
| 35 | L | A | -1.3690 | |
| 36 | D | A | -2.8987 | |
| 37 | W | A | -2.1317 | |
| 38 | I | A | 0.0000 | |
| 39 | E | A | -2.8412 | |
| 40 | D | A | -3.0486 | |
| 41 | N | A | -1.7424 | |
| 42 | L | A | -0.6333 | |
| 43 | E | A | -1.7868 | |
| 44 | S | A | -0.7941 | |
| 45 | P | A | -0.4712 | |
| 46 | L | A | -0.4836 | |
| 47 | S | A | -1.0717 | |
| 48 | L | A | -1.5068 | |
| 49 | E | A | -2.8632 | |
| 50 | K | A | -3.1238 | |
| 51 | V | A | 0.0000 | |
| 52 | S | A | 0.0000 | |
| 53 | E | A | -3.8250 | |
| 54 | R | A | -3.3277 | |
| 55 | S | A | -2.1448 | |
| 56 | G | A | -1.8883 | |
| 57 | Y | A | -1.3320 | |
| 58 | S | A | -1.4537 | |
| 59 | K | A | -2.1325 | |
| 60 | W | A | -0.4715 | |
| 61 | H | A | -1.3008 | |
| 62 | L | A | 0.0000 | |
| 63 | Q | A | -1.9373 | |
| 64 | R | A | -3.1400 | |
| 65 | M | A | -2.2323 | |
| 66 | F | A | 0.0000 | |
| 67 | K | A | -3.4883 | |
| 68 | K | A | -3.5685 | |
| 69 | E | A | -2.6253 | |
| 70 | T | A | -1.9232 | |
| 71 | G | A | -2.3686 | |
| 72 | H | A | -2.3888 | |
| 73 | S | A | -1.7651 | |
| 74 | L | A | 0.0000 | |
| 75 | G | A | -0.7551 | |
| 76 | Q | A | -1.0081 | |
| 77 | Y | A | 0.4763 |