Project name: 22a

Status: done

Started: 2026-05-26 16:13:30
Settings
Chain sequence(s) A: AAAKAALNAVLVGANA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:04)
Show buried residues

Minimal score value
-1.034
Maximal score value
3.0394
Average score
0.7813
Total score value
12.5014

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2558
2 A A -0.2530
3 A A -0.4043
4 K A -1.0340
5 A A -0.2335
6 A A 0.7984
7 L A 1.5638
8 N A 1.0867
9 A A 1.7712
10 V A 2.9968
11 L A 3.0394
12 V A 2.6664
13 G A 1.3283
14 A A 0.7336
15 N A -0.7620
16 A A -0.5406
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Laboratory of Theory of Biopolymers 2018