Project name: 8_i14e7_i20e6_x4e7_x11e6

Status: done

Started: 2025-08-11 19:03:13
Settings
Chain sequence(s) A: AAYRAHYNIVTFAAYTLQDIVLHLAAYLLMGTLGIVAAYLPARRAEPQAAYVYDFAFRDLAAYRFHNIAGHYAAYCYSLYGTTLAAYKTVLELTEVAAYLLCHEQLSDSEEENDGPGPGQSTHVDIRTLEDLLMGPGPGTPTLHEYMLDLQPETGPGPGLQDIVLHLEPQNEIPGPGPGAEKLRHLNEKRRFHNGPGPGLDKKQRFHNIRGRWTGPGPGNPAEKLRHLNEKRRFGPGPGSKISEYRHYCYSLYGGPGPG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:40)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:41)
Show buried residues

Minimal score value
-4.5217
Maximal score value
3.3865
Average score
-0.3289
Total score value
-85.1814

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 A A -0.2425
2 A A 0.0391
3 Y A 0.2979
4 R A -0.8220
5 A A -0.0275
6 H A 0.5709
7 Y A 1.5944
8 N A 1.2248
9 I A 2.8936
10 V A 3.1719
11 T A 2.6281
12 F A 3.3865
13 A A 2.2737
14 A A 1.7542
15 Y A 1.8450
16 T A 1.1398
17 L A 0.9377
18 Q A 0.1499
19 D A -0.1848
20 I A 1.6537
21 V A 1.4940
22 L A 1.4497
23 H A 0.7364
24 L A 1.5693
25 A A 1.6608
26 A A 1.7741
27 Y A 2.3281
28 L A 2.0042
29 L A 2.2325
30 M A 2.5910
31 G A 1.7362
32 T A 1.7874
33 L A 2.7460
34 G A 1.5929
35 I A 2.2157
36 V A 2.0688
37 A A 1.4586
38 A A 1.3001
39 Y A 1.0709
40 L A 0.3704
41 P A -0.6802
42 A A -1.1039
43 R A -2.1263
44 R A -2.6116
45 A A -1.8434
46 E A -2.0887
47 P A -1.4737
48 Q A -0.8490
49 A A -0.1329
50 A A 0.0000
51 Y A 1.8311
52 V A 2.7442
53 Y A 1.3029
54 D A 0.9925
55 F A 1.7966
56 A A 0.6922
57 F A 0.3333
58 R A -1.6051
59 D A -1.6099
60 L A -0.4626
61 A A -0.7116
62 A A -0.5693
63 Y A -0.1799
64 R A -1.3488
65 F A -0.1424
66 H A -0.8214
67 N A -0.9536
68 I A -0.0712
69 A A 0.0794
70 G A -0.7155
71 H A -0.4411
72 Y A 0.4712
73 A A 0.8725
74 A A 0.9327
75 Y A 1.7059
76 C A 0.0000
77 Y A 1.7358
78 S A 1.3325
79 L A 1.9075
80 Y A 1.7597
81 G A 0.6800
82 T A 0.7768
83 T A 1.1138
84 L A 1.6406
85 A A 0.9054
86 A A 0.0000
87 Y A 1.3247
88 K A -0.3878
89 T A -0.4071
90 V A 0.1629
91 L A -0.2316
92 E A -1.4405
93 L A 0.1997
94 T A -0.1826
95 E A -0.6201
96 V A 1.5110
97 A A 1.3900
98 A A 1.3067
99 Y A 1.8653
100 L A 1.5728
101 L A 1.4687
102 C A 1.1088
103 H A -0.5824
104 E A -1.8134
105 Q A -1.6782
106 L A -0.6630
107 S A -2.2963
108 D A -3.3697
109 S A -2.9294
110 E A -3.8283
111 E A -4.5217
112 E A -4.3297
113 N A -3.9498
114 D A -3.3852
115 G A -2.1189
116 P A -1.3210
117 G A -1.3818
118 P A -1.0902
119 G A -1.3814
120 Q A -1.8056
121 S A -1.0505
122 T A -0.6926
123 H A -0.4630
124 V A 0.9618
125 D A -0.1392
126 I A 0.6214
127 R A -1.5398
128 T A -0.5699
129 L A 0.1965
130 E A -1.2911
131 D A -1.0985
132 L A 1.1160
133 L A 1.5877
134 M A 0.9756
135 G A 0.0739
136 P A -0.3760
137 G A -0.6135
138 P A -0.8854
139 G A -0.8620
140 T A -0.3522
141 P A -0.1760
142 T A -0.0165
143 L A 0.6740
144 H A -0.7739
145 E A -0.7637
146 Y A 1.0759
147 M A 1.5330
148 L A 1.5335
149 D A -0.1843
150 L A 0.3267
151 Q A -1.2915
152 P A -1.6427
153 E A -2.1984
154 T A -1.4951
155 G A -1.2058
156 P A -0.8410
157 G A -0.7681
158 P A -0.6249
159 G A -0.4916
160 L A 0.4056
161 Q A -0.7311
162 D A -0.3579
163 I A 2.1875
164 V A 2.7684
165 L A 2.4619
166 H A 0.7148
167 L A 0.6095
168 E A -1.7132
169 P A -1.9552
170 Q A -2.6702
171 N A -2.6055
172 E A -1.8616
173 I A 0.5981
174 P A 0.1474
175 G A -0.4016
176 P A -0.6420
177 G A -0.9074
178 P A -0.9801
179 G A -1.3007
180 A A -1.3913
181 E A -2.5454
182 K A -2.4671
183 L A -0.7357
184 R A -1.9661
185 H A -1.5066
186 L A -0.5061
187 N A -2.5447
188 E A -3.7245
189 K A -3.8536
190 R A -3.8242
191 R A -2.8046
192 F A -0.5622
193 H A -1.4156
194 N A -1.7071
195 G A -1.2953
196 P A -1.0412
197 G A -0.9000
198 P A -0.4641
199 G A -0.2664
200 L A 0.0209
201 D A -2.3064
202 K A -3.5836
203 K A -3.7704
204 Q A -2.9932
205 R A -2.4884
206 F A 0.0454
207 H A -0.9521
208 N A -1.0762
209 I A -0.0264
210 R A -1.8675
211 G A -1.5322
212 R A -1.6569
213 W A -0.1902
214 T A -0.4331
215 G A -0.6543
216 P A -0.7074
217 G A -0.9376
218 P A -1.0155
219 G A -1.4060
220 N A -1.6666
221 P A -1.3450
222 A A -1.5096
223 E A -2.4639
224 K A -2.3513
225 L A -0.6457
226 R A -1.9416
227 H A -1.4985
228 L A -0.4517
229 N A -2.4678
230 E A -3.7136
231 K A -3.8324
232 R A -3.7658
233 R A -2.5640
234 F A -0.0396
235 G A -0.4084
236 P A -0.5165
237 G A -0.6475
238 P A -0.8075
239 G A -0.9842
240 S A -0.9593
241 K A -1.1654
242 I A 0.6803
243 S A -0.2369
244 E A -1.3543
245 Y A -0.3641
246 R A -1.7969
247 H A -0.6335
248 Y A 1.2268
249 C A 1.8905
250 Y A 2.3078
251 S A 1.6200
252 L A 2.3315
253 Y A 1.8257
254 G A 0.2022
255 G A -0.4644
256 P A -0.9167
257 G A -0.9835
258 P A -0.7658
259 G A -0.7177
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Laboratory of Theory of Biopolymers 2018