| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVKNGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTIGHPLFNKLGDTENPTEPQHESADVRVAFSFDPKQTQLFIVGCEPPTGEHWDLAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPEGVPLPDAPPPSPLYVPPDPSSPFAVRPSTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLSTPKENVYDPSNFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9498 | |
| 2 | L | A | 1.9747 | |
| 3 | P | A | 0.6537 | |
| 4 | P | A | 0.3184 | |
| 5 | T | A | 0.0962 | |
| 6 | T | A | 0.1250 | |
| 7 | P | A | 0.1590 | |
| 8 | V | A | 1.2213 | |
| 9 | A | A | 0.0182 | |
| 10 | K | A | -1.1622 | |
| 11 | V | A | -0.4126 | |
| 12 | Q | A | -1.5186 | |
| 13 | S | A | -1.5976 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4033 | |
| 16 | E | A | -2.4284 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4647 | |
| 20 | P | A | 0.1096 | |
| 21 | T | A | 0.1137 | |
| 22 | S | A | -0.1703 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.1064 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.3005 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.8952 | |
| 31 | R | A | -2.6787 | |
| 32 | L | A | -0.8035 | |
| 33 | L | A | 1.2129 | |
| 34 | T | A | 1.4765 | |
| 35 | V | A | 2.0377 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2033 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6194 | |
| 40 | K | A | -1.6388 | |
| 41 | D | A | -0.9195 | |
| 42 | I | A | 0.8544 | |
| 43 | V | A | 1.0317 | |
| 44 | K | A | -1.1943 | |
| 45 | N | A | -1.9347 | |
| 46 | G | A | -1.2326 | |
| 47 | K | A | -0.9405 | |
| 48 | V | A | 1.5070 | |
| 49 | V | A | 2.0788 | |
| 50 | V | A | 1.3228 | |
| 51 | P | A | 0.4973 | |
| 52 | K | A | -0.6080 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1373 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4992 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3023 | |
| 70 | K | A | -1.8186 | |
| 71 | F | A | -0.6728 | |
| 72 | A | A | -0.5702 | |
| 73 | L | A | -0.8532 | |
| 74 | P | A | -1.2539 | |
| 75 | Q | A | -2.4672 | |
| 76 | K | A | -3.0873 | |
| 77 | D | A | -2.9843 | |
| 78 | F | A | -1.6313 | |
| 79 | Y | A | -1.9089 | |
| 80 | D | A | -2.7454 | |
| 81 | P | A | -2.3462 | |
| 82 | E | A | -3.0627 | |
| 83 | K | A | -3.4346 | |
| 84 | E | A | -2.4914 | |
| 85 | R | A | -1.2824 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6213 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9902 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3590 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6875 | |
| 99 | G | A | -0.5323 | |
| 100 | P | A | -0.4222 | |
| 101 | L | A | -0.0066 | |
| 102 | G | A | -0.2827 | |
| 103 | K | A | -0.7449 | |
| 104 | G | A | -0.5459 | |
| 105 | T | A | -0.4781 | |
| 106 | I | A | 0.0000 | |
| 107 | G | A | 0.1394 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4005 | |
| 110 | L | A | 0.3485 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -0.9950 | |
| 113 | K | A | -0.4452 | |
| 114 | L | A | -1.1680 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.5676 | |
| 117 | T | A | -1.2068 | |
| 118 | E | A | -2.6483 | |
| 119 | N | A | -2.5965 | |
| 120 | P | A | -2.2286 | |
| 121 | T | A | -1.8251 | |
| 122 | E | A | -2.5651 | |
| 123 | P | A | -1.6620 | |
| 124 | Q | A | -2.1883 | |
| 125 | H | A | -2.2316 | |
| 126 | E | A | -2.8318 | |
| 127 | S | A | -1.9586 | |
| 128 | A | A | -1.4433 | |
| 129 | D | A | -2.1119 | |
| 130 | V | A | -1.4630 | |
| 131 | R | A | -0.7460 | |
| 132 | V | A | 0.3822 | |
| 133 | A | A | 0.4259 | |
| 134 | F | A | 0.2723 | |
| 135 | S | A | -0.0739 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6903 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5560 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2495 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.2110 | |
| 157 | D | A | 0.5329 | |
| 158 | L | A | 1.1534 | |
| 159 | A | A | 0.9515 | |
| 160 | P | A | 0.0982 | |
| 161 | P | A | 0.4764 | |
| 162 | C | A | 0.5285 | |
| 163 | P | A | 0.0264 | |
| 164 | G | A | -0.0638 | |
| 165 | L | A | 0.6184 | |
| 166 | P | A | -0.0939 | |
| 167 | P | A | -0.3303 | |
| 168 | G | A | -0.4181 | |
| 169 | A | A | 0.2974 | |
| 170 | C | A | 1.0143 | |
| 171 | P | A | 0.7570 | |
| 172 | P | A | 1.1246 | |
| 173 | I | A | 2.2928 | |
| 174 | Q | A | 1.2519 | |
| 175 | L | A | 1.5955 | |
| 176 | V | A | 0.8844 | |
| 177 | N | A | -0.3474 | |
| 178 | S | A | -0.0191 | |
| 179 | V | A | 0.3507 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3481 | |
| 182 | D | A | 0.0478 | |
| 183 | G | A | -0.1665 | |
| 184 | D | A | -0.5681 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1498 | |
| 190 | F | A | 0.0470 | |
| 191 | G | A | -0.1152 | |
| 192 | N | A | -0.2698 | |
| 193 | M | A | -0.1199 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4119 | |
| 197 | E | A | -2.6255 | |
| 198 | L | A | -1.2467 | |
| 199 | Q | A | -2.5510 | |
| 200 | Q | A | -3.3396 | |
| 201 | D | A | -3.6068 | |
| 202 | R | A | -3.3559 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1670 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3996 | |
| 211 | S | A | -1.9177 | |
| 212 | T | A | -1.4821 | |
| 213 | R | A | -2.1349 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1689 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.2595 | |
| 220 | L | A | 0.4521 | |
| 221 | K | A | -1.4012 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9924 | |
| 224 | N | A | -1.7213 | |
| 225 | E | A | -1.3340 | |
| 226 | A | A | -0.8309 | |
| 227 | Y | A | -0.4536 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7191 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1424 | |
| 234 | F | A | 0.0350 | |
| 235 | G | A | -0.9102 | |
| 236 | R | A | -2.6597 | |
| 237 | R | A | -2.9165 | |
| 238 | E | A | -2.1155 | |
| 239 | Q | A | -0.1332 | |
| 240 | V | A | 1.5491 | |
| 241 | Y | A | 1.2560 | |
| 242 | A | A | 0.1843 | |
| 243 | R | A | -1.2739 | |
| 244 | H | A | -1.1206 | |
| 245 | F | A | -0.1927 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.2403 | |
| 248 | R | A | -0.6004 | |
| 249 | A | A | -1.4017 | |
| 250 | G | A | -1.1029 | |
| 251 | P | A | -0.7360 | |
| 252 | E | A | -0.4059 | |
| 253 | G | A | 0.0730 | |
| 254 | V | A | 1.3144 | |
| 255 | P | A | -0.0035 | |
| 256 | L | A | 0.2160 | |
| 257 | P | A | -0.5032 | |
| 258 | D | A | -1.7607 | |
| 259 | A | A | -0.5184 | |
| 260 | P | A | -0.6933 | |
| 261 | P | A | -0.2090 | |
| 262 | P | A | 0.0447 | |
| 263 | S | A | 0.2450 | |
| 264 | P | A | 0.6713 | |
| 265 | L | A | 1.6673 | |
| 266 | Y | A | 1.4772 | |
| 267 | V | A | 1.7151 | |
| 268 | P | A | 0.2518 | |
| 269 | P | A | -0.0619 | |
| 270 | D | A | -1.5380 | |
| 271 | P | A | -0.7423 | |
| 272 | S | A | -0.7034 | |
| 273 | S | A | -0.0098 | |
| 274 | P | A | 0.5691 | |
| 275 | F | A | 1.7101 | |
| 276 | A | A | 0.8823 | |
| 277 | V | A | 1.7884 | |
| 278 | R | A | 0.4611 | |
| 279 | P | A | -0.4718 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.1747 | |
| 282 | D | A | -0.5100 | |
| 283 | Y | A | 0.9022 | |
| 284 | F | A | 0.6906 | |
| 285 | G | A | 0.1130 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9266 | |
| 291 | L | A | 1.6103 | |
| 292 | V | A | 0.5891 | |
| 293 | S | A | -0.1924 | |
| 294 | S | A | -1.0058 | |
| 295 | D | A | -1.8813 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | -1.0522 | |
| 298 | L | A | -1.1880 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6785 | |
| 301 | R | A | -1.9276 | |
| 302 | P | A | -0.9766 | |
| 303 | F | A | -0.1820 | |
| 304 | W | A | -0.5082 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0753 | |
| 307 | R | A | -2.9213 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.7852 | |
| 310 | G | A | -1.4280 | |
| 311 | N | A | -1.3988 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9581 | |
| 319 | N | A | -0.9060 | |
| 320 | E | A | -1.0580 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3649 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1930 | |
| 333 | N | A | 0.3938 | |
| 334 | F | A | 1.4340 | |
| 335 | T | A | 0.7316 | |
| 336 | I | A | 0.3729 | |
| 337 | S | A | -1.0904 | |
| 338 | Q | A | -1.9139 | |
| 339 | Q | A | -1.6669 | |
| 340 | L | A | 0.1972 | |
| 341 | S | A | -0.3094 | |
| 342 | T | A | -0.8672 | |
| 343 | P | A | -1.4664 | |
| 344 | K | A | -2.4698 | |
| 345 | E | A | -2.6376 | |
| 346 | N | A | -1.5265 | |
| 347 | V | A | 0.5580 | |
| 348 | Y | A | 0.8668 | |
| 349 | D | A | -0.2442 | |
| 350 | P | A | -0.6998 | |
| 351 | S | A | -0.5759 | |
| 352 | N | A | -0.8994 | |
| 353 | F | A | -1.1385 | |
| 354 | K | A | -2.0303 | |
| 355 | N | A | -1.8329 | |
| 356 | Y | A | -0.1478 | |
| 357 | L | A | 0.5738 | |
| 358 | R | A | 0.9367 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4831 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0083 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0201 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6870 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3121 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3240 | |
| 376 | L | A | -1.7514 | |
| 377 | D | A | -2.0452 | |
| 378 | P | A | -1.0683 | |
| 379 | G | A | -1.0218 | |
| 380 | V | A | -0.9285 | |
| 381 | L | A | -0.5401 | |
| 382 | A | A | -0.6573 | |
| 383 | H | A | -0.8470 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3919 | |
| 386 | T | A | -0.5651 | |
| 387 | M | A | -0.3289 | |
| 388 | N | A | -0.8627 | |
| 389 | P | A | -1.2855 | |
| 390 | T | A | -1.6236 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.6079 | |
| 393 | E | A | -3.0365 | |
| 394 | N | A | -2.8502 | |
| 395 | W | A | -1.6064 | |
| 396 | N | A | -1.4341 | |
| 397 | L | A | -0.2614 | |
| 398 | G | A | 0.5181 | |
| 399 | F | A | 2.4108 | |
| 400 | V | A | 1.8394 | |
| 401 | P | A | 0.0582 | |
| 402 | P | A | -2.0045 | |
| 403 | K | A | -3.6632 | |
| 404 | E | A | -4.0985 | |
| 405 | R | A | -4.6471 | |
| 406 | E | A | -4.1113 | |
| 407 | D | A | -3.0273 | |
| 408 | P | A | -1.8492 | |
| 409 | Y | A | -0.9972 | |
| 410 | K | A | -2.1028 | |
| 411 | G | A | -0.6425 | |
| 412 | L | A | 0.6507 | |
| 413 | I | A | 1.5629 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.4164 | |
| 416 | E | A | -1.6981 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9390 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0672 | |
| 421 | E | A | -2.7789 | |
| 422 | R | A | -2.5632 | |
| 423 | F | A | -1.2949 | |
| 424 | S | A | -1.4725 | |
| 425 | Q | A | -1.8062 | |
| 426 | D | A | -2.8929 | |
| 427 | L | A | -1.9715 | |
| 428 | D | A | -2.7394 | |
| 429 | Q | A | -2.5918 | |
| 430 | F | A | -1.4048 | |
| 431 | A | A | -0.8656 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.4872 | |
| 435 | K | A | -0.6799 | |
| 436 | F | A | 0.1888 | |
| 437 | L | A | 1.0636 | |
| 438 | Y | A | 0.8530 | |
| 439 | Q | A | -0.2517 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine