| Chain sequence(s) |
A: GSSVSSVPTKLEVVAATPTSLLISWDAGYYMNYYMVDYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYWYDEYGQYWWSESPSSINYRT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:39)
[INFO] Main: Simulation completed successfully. (00:00:40)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4057 | |
| 2 | S | A | -0.0324 | |
| 3 | S | A | 0.3344 | |
| 4 | V | A | 1.5585 | |
| 5 | S | A | 0.5684 | |
| 6 | S | A | 0.4508 | |
| 7 | V | A | -0.2631 | |
| 8 | P | A | 0.0000 | |
| 9 | T | A | -1.7060 | |
| 10 | K | A | -2.6076 | |
| 11 | L | A | 0.0000 | |
| 12 | E | A | -1.6003 | |
| 13 | V | A | 0.2745 | |
| 14 | V | A | 1.6401 | |
| 15 | A | A | 0.9513 | |
| 16 | A | A | 0.3287 | |
| 17 | T | A | -0.1892 | |
| 18 | P | A | -0.8121 | |
| 19 | T | A | -0.5401 | |
| 20 | S | A | -0.3022 | |
| 21 | L | A | 0.0000 | |
| 22 | L | A | 0.8336 | |
| 23 | I | A | 0.0000 | |
| 24 | S | A | -0.6761 | |
| 25 | W | A | 0.0000 | |
| 26 | D | A | -2.3481 | |
| 27 | A | A | -0.7374 | |
| 28 | G | A | 0.1553 | |
| 29 | Y | A | 1.6921 | |
| 30 | Y | A | 0.0000 | |
| 31 | M | A | 1.2252 | |
| 32 | N | A | -0.0900 | |
| 33 | Y | A | 1.4816 | |
| 34 | Y | A | 1.1965 | |
| 35 | M | A | 1.6578 | |
| 36 | V | A | 0.0000 | |
| 37 | D | A | 0.0607 | |
| 38 | Y | A | 0.1200 | |
| 39 | Y | A | 0.0000 | |
| 40 | R | A | -0.4175 | |
| 41 | I | A | 0.0000 | |
| 42 | T | A | 0.0000 | |
| 43 | Y | A | -0.4543 | |
| 44 | G | A | 0.0000 | |
| 45 | E | A | -1.5832 | |
| 46 | T | A | -1.3901 | |
| 47 | G | A | -1.3831 | |
| 48 | G | A | -1.2749 | |
| 49 | N | A | -1.6745 | |
| 50 | S | A | -0.8738 | |
| 51 | P | A | -0.3469 | |
| 52 | V | A | 0.2919 | |
| 53 | Q | A | -1.2157 | |
| 54 | E | A | -1.8401 | |
| 55 | F | A | -0.7025 | |
| 56 | T | A | -0.1833 | |
| 57 | V | A | 0.0091 | |
| 58 | P | A | -0.3384 | |
| 59 | G | A | 0.0000 | |
| 60 | S | A | -0.2151 | |
| 61 | S | A | -0.4461 | |
| 62 | S | A | -0.6006 | |
| 63 | T | A | -0.2009 | |
| 64 | A | A | 0.0000 | |
| 65 | T | A | 0.3257 | |
| 66 | I | A | 0.0000 | |
| 67 | S | A | -0.4685 | |
| 68 | G | A | -0.6805 | |
| 69 | L | A | 0.0000 | |
| 70 | S | A | -0.8701 | |
| 71 | P | A | -1.0243 | |
| 72 | G | A | -1.1597 | |
| 73 | V | A | -1.0829 | |
| 74 | D | A | -1.9284 | |
| 75 | Y | A | 0.0000 | |
| 76 | T | A | -0.8271 | |
| 77 | I | A | 0.0000 | |
| 78 | T | A | -0.4673 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | -0.0214 | |
| 81 | A | A | 0.0000 | |
| 82 | Y | A | 0.9747 | |
| 83 | W | A | 0.0000 | |
| 84 | Y | A | 0.7528 | |
| 85 | D | A | -0.1700 | |
| 86 | E | A | -1.3552 | |
| 87 | Y | A | 0.0601 | |
| 88 | G | A | -0.4291 | |
| 89 | Q | A | -0.4935 | |
| 90 | Y | A | 0.6780 | |
| 91 | W | A | 1.0507 | |
| 92 | W | A | 0.9445 | |
| 93 | S | A | 0.0000 | |
| 94 | E | A | -1.5721 | |
| 95 | S | A | -1.0151 | |
| 96 | P | A | -0.5687 | |
| 97 | S | A | -0.7405 | |
| 98 | S | A | -0.7263 | |
| 99 | I | A | -0.7617 | |
| 100 | N | A | -1.7143 | |
| 101 | Y | A | -1.4620 | |
| 102 | R | A | -2.4061 | |
| 103 | T | A | -1.2269 |