| Chain sequence(s) |
A: FRAPPVIPNVPFLWAWNAPSEFCLGKFDEPLDMSLFSFIGSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMPVDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAGKDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNESTALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFLSQDELVYTFGETVALGASGIVIWGSWENTRTKESCQAIKEYMDTTLNPYIINVTLAAKMCSQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCSCYSTLSCKEKADVKDTDAVDVCIADGVCIDAF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:58)
[INFO] Main: Simulation completed successfully. (00:11:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.5908 | |
| 2 | R | A | 0.0240 | |
| 3 | A | A | -0.1285 | |
| 4 | P | A | 0.0055 | |
| 5 | P | A | -0.1538 | |
| 6 | V | A | 0.3968 | |
| 7 | I | A | 0.2170 | |
| 8 | P | A | -0.5430 | |
| 9 | N | A | -1.4325 | |
| 10 | V | A | -0.1832 | |
| 11 | P | A | -0.5302 | |
| 12 | F | A | 0.0000 | |
| 13 | L | A | 0.0000 | |
| 14 | W | A | 0.0000 | |
| 15 | A | A | 0.0000 | |
| 16 | W | A | 0.0000 | |
| 17 | N | A | 0.0000 | |
| 18 | A | A | 0.0000 | |
| 19 | P | A | 0.0000 | |
| 20 | S | A | 0.0000 | |
| 21 | E | A | -0.4503 | |
| 22 | F | A | -0.1840 | |
| 23 | C | A | 0.0000 | |
| 24 | L | A | 0.6279 | |
| 25 | G | A | -0.2943 | |
| 26 | K | A | -0.6708 | |
| 27 | F | A | -0.1015 | |
| 28 | D | A | -1.7264 | |
| 29 | E | A | -2.2548 | |
| 30 | P | A | -1.0393 | |
| 31 | L | A | -0.7480 | |
| 32 | D | A | -0.9578 | |
| 33 | M | A | 0.0436 | |
| 34 | S | A | -0.6656 | |
| 35 | L | A | 0.0000 | |
| 36 | F | A | 0.0000 | |
| 37 | S | A | 0.1752 | |
| 38 | F | A | 0.0000 | |
| 39 | I | A | 0.8654 | |
| 40 | G | A | 0.0000 | |
| 41 | S | A | 0.0000 | |
| 42 | P | A | 0.0000 | |
| 43 | R | A | -0.5554 | |
| 44 | I | A | -0.0146 | |
| 45 | N | A | -0.7585 | |
| 46 | A | A | -0.5024 | |
| 47 | T | A | -0.0722 | |
| 48 | G | A | -0.2755 | |
| 49 | Q | A | -0.1832 | |
| 50 | G | A | -0.0723 | |
| 51 | V | A | 0.0000 | |
| 52 | T | A | 0.0000 | |
| 53 | I | A | 0.0000 | |
| 54 | F | A | 0.0000 | |
| 55 | Y | A | -0.3079 | |
| 56 | V | A | -0.6011 | |
| 57 | D | A | -1.3892 | |
| 58 | R | A | -0.5117 | |
| 59 | L | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | Y | A | -0.4100 | |
| 62 | Y | A | 0.0000 | |
| 63 | P | A | 0.0000 | |
| 64 | Y | A | 0.2317 | |
| 65 | I | A | 0.6583 | |
| 66 | D | A | 0.6180 | |
| 67 | S | A | 0.6859 | |
| 68 | I | A | 1.9127 | |
| 69 | T | A | 1.0867 | |
| 70 | G | A | 0.9072 | |
| 71 | V | A | 1.7699 | |
| 72 | T | A | 0.7597 | |
| 73 | V | A | 0.5412 | |
| 74 | N | A | -0.0231 | |
| 75 | G | A | -0.2657 | |
| 76 | G | A | 0.0000 | |
| 77 | I | A | 0.0000 | |
| 78 | P | A | 0.0000 | |
| 79 | Q | A | -1.2654 | |
| 80 | K | A | -1.2026 | |
| 81 | I | A | -0.7223 | |
| 82 | S | A | -1.0445 | |
| 83 | L | A | -1.1685 | |
| 84 | Q | A | -2.2486 | |
| 85 | D | A | -2.6084 | |
| 86 | H | A | 0.0000 | |
| 87 | L | A | -2.0947 | |
| 88 | D | A | -2.9787 | |
| 89 | K | A | -2.5066 | |
| 90 | A | A | 0.0000 | |
| 91 | K | A | -2.2179 | |
| 92 | K | A | -2.3720 | |
| 93 | D | A | -1.3506 | |
| 94 | I | A | 0.0000 | |
| 95 | T | A | -0.1532 | |
| 96 | F | A | 0.8584 | |
| 97 | Y | A | 0.0000 | |
| 98 | M | A | 0.0000 | |
| 99 | P | A | 0.6140 | |
| 100 | V | A | 0.9947 | |
| 101 | D | A | -0.7292 | |
| 102 | N | A | -1.2795 | |
| 103 | L | A | -0.3609 | |
| 104 | G | A | 0.0000 | |
| 105 | M | A | 0.0000 | |
| 106 | A | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | I | A | 0.0000 | |
| 109 | D | A | -0.2214 | |
| 110 | W | A | 0.0000 | |
| 111 | E | A | -0.8569 | |
| 112 | E | A | -0.8404 | |
| 113 | W | A | 0.0000 | |
| 114 | R | A | 0.0000 | |
| 115 | P | A | 0.0000 | |
| 116 | T | A | -0.7258 | |
| 117 | W | A | 0.0000 | |
| 118 | A | A | -0.0407 | |
| 119 | R | A | 0.0000 | |
| 120 | N | A | 0.0000 | |
| 121 | W | A | -0.2480 | |
| 122 | K | A | -1.5544 | |
| 123 | P | A | -1.1995 | |
| 124 | K | A | -1.0706 | |
| 125 | D | A | -0.9191 | |
| 126 | V | A | -0.3433 | |
| 127 | Y | A | 0.0000 | |
| 128 | K | A | -1.1111 | |
| 129 | N | A | -1.7308 | |
| 130 | R | A | -1.3378 | |
| 131 | S | A | 0.0000 | |
| 132 | I | A | -1.8640 | |
| 133 | E | A | -2.2546 | |
| 134 | L | A | -1.6789 | |
| 135 | V | A | -1.6189 | |
| 136 | Q | A | -1.4333 | |
| 137 | Q | A | -1.9641 | |
| 138 | Q | A | -1.9189 | |
| 139 | N | A | -1.1528 | |
| 140 | V | A | 0.2780 | |
| 141 | Q | A | -0.7263 | |
| 142 | L | A | -0.4568 | |
| 143 | S | A | 0.1848 | |
| 144 | L | A | 0.6003 | |
| 145 | T | A | -0.5453 | |
| 146 | E | A | -1.9146 | |
| 147 | A | A | 0.0000 | |
| 148 | T | A | -2.1543 | |
| 149 | E | A | -3.3316 | |
| 150 | K | A | -3.2786 | |
| 151 | A | A | 0.0000 | |
| 152 | K | A | -3.1850 | |
| 153 | Q | A | -3.6688 | |
| 154 | E | A | -3.5826 | |
| 155 | F | A | 0.0000 | |
| 156 | E | A | -2.3657 | |
| 157 | K | A | -2.8459 | |
| 158 | A | A | -1.8979 | |
| 159 | G | A | 0.0000 | |
| 160 | K | A | -1.6088 | |
| 161 | D | A | -1.3153 | |
| 162 | F | A | 0.0000 | |
| 163 | L | A | 0.0000 | |
| 164 | V | A | -0.9587 | |
| 165 | E | A | -1.4248 | |
| 166 | T | A | 0.0000 | |
| 167 | I | A | 0.0000 | |
| 168 | K | A | -0.7828 | |
| 169 | L | A | -0.3560 | |
| 170 | G | A | 0.0000 | |
| 171 | K | A | -0.2463 | |
| 172 | L | A | 0.9277 | |
| 173 | L | A | 0.3323 | |
| 174 | R | A | -0.3597 | |
| 175 | P | A | -0.8053 | |
| 176 | N | A | -1.3043 | |
| 177 | H | A | 0.0000 | |
| 178 | L | A | -0.0767 | |
| 179 | W | A | 0.0000 | |
| 180 | G | A | 0.0000 | |
| 181 | Y | A | 0.0000 | |
| 182 | Y | A | 0.0600 | |
| 183 | L | A | 0.0913 | |
| 184 | F | A | 0.0000 | |
| 185 | P | A | 0.0000 | |
| 186 | D | A | 0.0000 | |
| 187 | C | A | 0.0000 | |
| 188 | Y | A | 0.0032 | |
| 189 | N | A | 0.0000 | |
| 190 | H | A | -1.4280 | |
| 191 | H | A | -2.0882 | |
| 192 | Y | A | -1.9114 | |
| 193 | K | A | -3.0577 | |
| 194 | K | A | -3.0400 | |
| 195 | P | A | -1.8296 | |
| 196 | G | A | -1.5121 | |
| 197 | Y | A | -1.5047 | |
| 198 | N | A | -1.3361 | |
| 199 | G | A | 0.0000 | |
| 200 | S | A | -0.6113 | |
| 201 | C | A | 0.0000 | |
| 202 | F | A | 0.4510 | |
| 203 | N | A | -0.6841 | |
| 204 | V | A | 0.1355 | |
| 205 | E | A | 0.0000 | |
| 206 | I | A | -0.6781 | |
| 207 | K | A | -2.0455 | |
| 208 | R | A | -1.5567 | |
| 209 | N | A | 0.0000 | |
| 210 | D | A | -1.6290 | |
| 211 | D | A | -2.4248 | |
| 212 | L | A | 0.0000 | |
| 213 | S | A | -0.9268 | |
| 214 | W | A | -0.7297 | |
| 215 | L | A | 0.0000 | |
| 216 | W | A | 0.0000 | |
| 217 | N | A | -1.4953 | |
| 218 | E | A | -1.1520 | |
| 219 | S | A | 0.0000 | |
| 220 | T | A | -0.3975 | |
| 221 | A | A | 0.0000 | |
| 222 | L | A | 0.0000 | |
| 223 | Y | A | 0.0000 | |
| 224 | P | A | 0.0000 | |
| 225 | S | A | 0.0000 | |
| 226 | I | A | 0.0000 | |
| 227 | Y | A | 0.0263 | |
| 228 | L | A | 0.0000 | |
| 229 | N | A | -1.0389 | |
| 230 | T | A | -1.4210 | |
| 231 | Q | A | -1.7993 | |
| 232 | Q | A | -1.0025 | |
| 233 | S | A | -0.3340 | |
| 234 | P | A | 0.0758 | |
| 235 | V | A | 1.5132 | |
| 236 | A | A | 0.0000 | |
| 237 | A | A | 0.0000 | |
| 238 | T | A | 0.1796 | |
| 239 | L | A | 0.1508 | |
| 240 | Y | A | 0.0000 | |
| 241 | V | A | 0.0000 | |
| 242 | R | A | 0.0000 | |
| 243 | N | A | 0.0000 | |
| 244 | R | A | 0.0000 | |
| 245 | V | A | 0.0000 | |
| 246 | R | A | -0.5838 | |
| 247 | E | A | 0.0000 | |
| 248 | A | A | 0.0000 | |
| 249 | I | A | -0.4044 | |
| 250 | R | A | -0.7063 | |
| 251 | V | A | 0.0000 | |
| 252 | S | A | 0.0000 | |
| 253 | K | A | -1.4486 | |
| 254 | I | A | -0.7990 | |
| 255 | P | A | -1.3558 | |
| 256 | D | A | -2.1949 | |
| 257 | A | A | -1.5167 | |
| 258 | K | A | -1.9750 | |
| 259 | S | A | -1.3274 | |
| 260 | P | A | 0.0000 | |
| 261 | L | A | -0.5952 | |
| 262 | P | A | -0.0156 | |
| 263 | V | A | 0.0000 | |
| 264 | F | A | 0.0000 | |
| 265 | A | A | 0.0000 | |
| 266 | Y | A | 0.0000 | |
| 267 | T | A | 0.0000 | |
| 268 | R | A | -0.1217 | |
| 269 | I | A | 0.0000 | |
| 270 | V | A | 0.0000 | |
| 271 | F | A | 0.0000 | |
| 272 | T | A | -0.7405 | |
| 273 | D | A | -1.5501 | |
| 274 | Q | A | -1.3008 | |
| 275 | V | A | -0.1292 | |
| 276 | L | A | 0.5708 | |
| 277 | K | A | -0.8797 | |
| 278 | F | A | -0.2261 | |
| 279 | L | A | 0.0000 | |
| 280 | S | A | -1.4037 | |
| 281 | Q | A | -1.9914 | |
| 282 | D | A | -2.4174 | |
| 283 | E | A | -1.4373 | |
| 284 | L | A | 0.0000 | |
| 285 | V | A | -0.7572 | |
| 286 | Y | A | -0.2150 | |
| 287 | T | A | 0.0000 | |
| 288 | F | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | E | A | 0.0000 | |
| 291 | T | A | 0.0000 | |
| 292 | V | A | 0.0000 | |
| 293 | A | A | 0.0000 | |
| 294 | L | A | 0.0000 | |
| 295 | G | A | 0.0000 | |
| 296 | A | A | 0.0000 | |
| 297 | S | A | 0.0551 | |
| 298 | G | A | 0.0000 | |
| 299 | I | A | 0.0000 | |
| 300 | V | A | 0.0000 | |
| 301 | I | A | 0.0000 | |
| 302 | W | A | 0.0429 | |
| 303 | G | A | 0.0186 | |
| 304 | S | A | -0.2685 | |
| 305 | W | A | -0.2630 | |
| 306 | E | A | -1.1257 | |
| 307 | N | A | 0.0000 | |
| 308 | T | A | 0.0000 | |
| 309 | R | A | -2.5376 | |
| 310 | T | A | -2.4511 | |
| 311 | K | A | -2.6113 | |
| 312 | E | A | -2.8794 | |
| 313 | S | A | -2.1265 | |
| 314 | C | A | 0.0000 | |
| 315 | Q | A | -1.6424 | |
| 316 | A | A | -1.3542 | |
| 317 | I | A | 0.0000 | |
| 318 | K | A | -1.5737 | |
| 319 | E | A | -2.1071 | |
| 320 | Y | A | 0.0000 | |
| 321 | M | A | 0.0000 | |
| 322 | D | A | -1.2995 | |
| 323 | T | A | -0.9142 | |
| 324 | T | A | 0.0000 | |
| 325 | L | A | 0.0000 | |
| 326 | N | A | 0.0000 | |
| 327 | P | A | -0.2934 | |
| 328 | Y | A | 0.0000 | |
| 329 | I | A | 0.0000 | |
| 330 | I | A | 0.0000 | |
| 331 | N | A | -0.2797 | |
| 332 | V | A | 0.0000 | |
| 333 | T | A | 0.0000 | |
| 334 | L | A | 0.0000 | |
| 335 | A | A | 0.0000 | |
| 336 | A | A | -0.0915 | |
| 337 | K | A | -0.8808 | |
| 338 | M | A | 0.0000 | |
| 339 | C | A | 0.0000 | |
| 340 | S | A | 0.0000 | |
| 341 | Q | A | -1.7013 | |
| 342 | V | A | 0.0000 | |
| 343 | L | A | 0.0000 | |
| 344 | C | A | 0.0000 | |
| 345 | Q | A | -2.5350 | |
| 346 | E | A | -2.7902 | |
| 347 | Q | A | -2.0456 | |
| 348 | G | A | 0.0000 | |
| 349 | V | A | -0.0155 | |
| 350 | C | A | 0.0000 | |
| 351 | I | A | 0.4424 | |
| 352 | R | A | 0.0000 | |
| 353 | K | A | -1.4745 | |
| 354 | N | A | -1.6431 | |
| 355 | W | A | -0.7228 | |
| 356 | N | A | -1.1673 | |
| 357 | S | A | -1.0502 | |
| 358 | S | A | -0.6145 | |
| 359 | D | A | -0.8298 | |
| 360 | Y | A | -0.0804 | |
| 361 | L | A | 0.0000 | |
| 362 | H | A | -0.4061 | |
| 363 | L | A | 0.0000 | |
| 364 | N | A | -1.7314 | |
| 365 | P | A | -1.4771 | |
| 366 | D | A | -2.2533 | |
| 367 | N | A | -2.2656 | |
| 368 | F | A | 0.0000 | |
| 369 | A | A | -1.4596 | |
| 370 | I | A | -0.8005 | |
| 371 | Q | A | -1.9922 | |
| 372 | L | A | -1.7996 | |
| 373 | E | A | -3.3586 | |
| 374 | K | A | -3.2354 | |
| 375 | G | A | -2.5253 | |
| 376 | G | A | -2.6761 | |
| 377 | K | A | -3.2985 | |
| 378 | F | A | 0.0000 | |
| 379 | T | A | 0.0000 | |
| 380 | V | A | 0.0000 | |
| 381 | R | A | -2.7468 | |
| 382 | G | A | -2.7876 | |
| 383 | K | A | -2.4849 | |
| 384 | P | A | 0.0000 | |
| 385 | T | A | -1.1770 | |
| 386 | L | A | -1.6514 | |
| 387 | E | A | -2.4858 | |
| 388 | D | A | 0.0000 | |
| 389 | L | A | 0.0000 | |
| 390 | E | A | -3.2484 | |
| 391 | Q | A | -2.3662 | |
| 392 | F | A | 0.0000 | |
| 393 | S | A | -2.1259 | |
| 394 | E | A | -2.6044 | |
| 395 | K | A | -2.0109 | |
| 396 | F | A | 0.0000 | |
| 397 | Y | A | 0.4370 | |
| 398 | C | A | -0.0997 | |
| 399 | S | A | 0.4473 | |
| 400 | C | A | -0.3320 | |
| 401 | Y | A | 0.0000 | |
| 402 | S | A | -0.3424 | |
| 403 | T | A | -0.0664 | |
| 404 | L | A | 0.2732 | |
| 405 | S | A | -0.2657 | |
| 406 | C | A | 0.0000 | |
| 407 | K | A | -2.3122 | |
| 408 | E | A | -1.8801 | |
| 409 | K | A | -2.0440 | |
| 410 | A | A | -1.7993 | |
| 411 | D | A | -3.1482 | |
| 412 | V | A | 0.0000 | |
| 413 | K | A | -3.7780 | |
| 414 | D | A | -3.5600 | |
| 415 | T | A | -2.2907 | |
| 416 | D | A | -2.0247 | |
| 417 | A | A | -1.0671 | |
| 418 | V | A | 0.0000 | |
| 419 | D | A | -2.1506 | |
| 420 | V | A | 0.0000 | |
| 421 | C | A | -0.7087 | |
| 422 | I | A | -0.1171 | |
| 423 | A | A | -0.7693 | |
| 424 | D | A | -2.0895 | |
| 425 | G | A | -1.4429 | |
| 426 | V | A | 0.0000 | |
| 427 | C | A | -1.1732 | |
| 428 | I | A | 0.0000 | |
| 429 | D | A | -2.6024 | |
| 430 | A | A | -1.1655 | |
| 431 | F | A | 0.5886 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine