| Chain sequence(s) |
A: QVQLVQSGSELKKPGASSVKVSCKASGYTFTQNNMDWVRQAPGQGLEWMGDINTRSGGVVIIYYNEEFQDRLIMMTVDKSSTDTAYMMELSSLRSSEDTATYHCARRKSYGYYLDVWGEGTLVTVSSASTTKGPSVFPLAPCSRTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYTCNVDHKPSNNTKVDKRVES
B: SYVLTQPVSVSVALGQTATITCEGEQQIGSKEVHWYHQRPGQAPILVMFRDARRPSGIPERLSGSNSGNTASSLTISGAEAGDEEGDYYCQVWDSSSYTVFGGGTKVTVVGQPKAAPSSVTLFPPSSEEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVEETTTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVVEKTTVAPTEC input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:15)
[INFO] Main: Simulation completed successfully. (00:05:19)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.4311 | |
| 2 | V | A | -0.6334 | |
| 3 | Q | A | -1.0868 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 0.6398 | |
| 6 | Q | A | -0.1622 | |
| 7 | S | A | -0.6870 | |
| 8 | G | A | -0.8089 | |
| 9 | S | A | 0.0000 | |
| 10 | E | A | -1.5351 | |
| 11 | L | A | -0.9941 | |
| 12 | K | A | -1.6597 | |
| 13 | K | A | -2.4346 | |
| 14 | P | A | -2.1875 | |
| 15 | G | A | -1.5559 | |
| 16 | A | A | -1.2228 | |
| 17 | S | A | -1.3282 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -1.8805 | |
| 20 | V | A | 0.0000 | |
| 21 | S | A | -0.5197 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -1.0869 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.8609 | |
| 26 | G | A | -0.9264 | |
| 27 | Y | A | -0.5128 | |
| 28 | T | A | -0.4025 | |
| 29 | F | A | 0.0000 | |
| 30 | T | A | -1.5397 | |
| 31 | Q | A | -1.0991 | |
| 32 | N | A | 0.0000 | |
| 33 | N | A | -0.7510 | |
| 34 | M | A | 0.0000 | |
| 35 | D | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | R | A | -0.6238 | |
| 39 | Q | A | -0.8885 | |
| 40 | A | A | -1.1484 | |
| 41 | P | A | -0.9146 | |
| 42 | G | A | -1.2245 | |
| 43 | Q | A | -1.7855 | |
| 44 | G | A | -1.2867 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -0.8843 | |
| 47 | W | A | 0.0000 | |
| 48 | M | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | D | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | N | A | -1.2043 | |
| 53 | T | A | 0.0000 | |
| 54 | R | A | -2.6730 | |
| 55 | S | A | -1.5372 | |
| 56 | G | A | -1.3414 | |
| 57 | G | A | -0.6553 | |
| 58 | V | A | 0.3019 | |
| 59 | I | A | 0.2286 | |
| 60 | Y | A | -0.7459 | |
| 61 | N | A | -1.6371 | |
| 62 | E | A | -3.3314 | |
| 63 | E | A | -3.3537 | |
| 64 | F | A | 0.0000 | |
| 65 | Q | A | -2.6705 | |
| 66 | D | A | -2.7387 | |
| 67 | R | A | 0.0000 | |
| 68 | L | A | 0.0000 | |
| 69 | I | A | 0.6297 | |
| 70 | M | A | 0.0000 | |
| 71 | T | A | -0.0697 | |
| 72 | V | A | -1.2925 | |
| 73 | D | A | -2.0634 | |
| 74 | K | A | -2.7462 | |
| 75 | S | A | -1.4791 | |
| 76 | T | A | -1.4814 | |
| 77 | D | A | -1.9938 | |
| 78 | T | A | -1.2991 | |
| 79 | A | A | 0.0000 | |
| 80 | Y | A | -0.3868 | |
| 81 | M | A | 0.0000 | |
| 82 | E | A | -0.8849 | |
| 83 | L | A | 0.0000 | |
| 84 | S | A | -0.9473 | |
| 85 | S | A | -1.2437 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.6682 | |
| 88 | S | A | -2.2191 | |
| 89 | E | A | -2.4122 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.9978 | |
| 92 | A | A | 0.0000 | |
| 93 | T | A | -0.3366 | |
| 94 | Y | A | 0.0000 | |
| 95 | H | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | R | A | -0.3426 | |
| 99 | R | A | 0.0000 | |
| 100 | K | A | -0.2262 | |
| 101 | S | A | 0.1250 | |
| 102 | Y | A | 1.1786 | |
| 103 | G | A | 0.7064 | |
| 104 | Y | A | 0.8183 | |
| 105 | Y | A | 0.0000 | |
| 106 | L | A | 0.0000 | |
| 107 | D | A | -0.1128 | |
| 108 | V | A | -0.0316 | |
| 109 | W | A | 0.0000 | |
| 110 | G | A | 0.0000 | |
| 111 | E | A | -1.8911 | |
| 112 | G | A | -0.9546 | |
| 113 | T | A | 0.0000 | |
| 114 | L | A | -0.3532 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.9583 | |
| 117 | V | A | 0.0000 | |
| 118 | S | A | -1.3910 | |
| 119 | S | A | -0.9533 | |
| 120 | A | A | -0.5984 | |
| 121 | S | A | -0.6932 | |
| 122 | T | A | -0.8959 | |
| 123 | K | A | -1.3907 | |
| 124 | G | A | -1.5599 | |
| 125 | P | A | 0.0000 | |
| 126 | S | A | -0.4845 | |
| 127 | V | A | 0.0000 | |
| 128 | F | A | 0.0000 | |
| 129 | P | A | -0.7856 | |
| 130 | L | A | 0.0000 | |
| 131 | A | A | -0.1573 | |
| 132 | P | A | -0.4630 | |
| 133 | C | A | -0.4073 | |
| 134 | S | A | -1.0603 | |
| 135 | R | A | -1.8379 | |
| 137 | T | A | -1.0653 | |
| 138 | S | A | -1.3899 | |
| 139 | E | A | -2.2778 | |
| 140 | S | A | -1.3219 | |
| 141 | T | A | -0.9320 | |
| 142 | A | A | -0.6875 | |
| 143 | A | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | G | A | 0.0000 | |
| 146 | C | A | 0.0000 | |
| 147 | L | A | 0.0000 | |
| 148 | V | A | 0.0000 | |
| 149 | K | A | -0.4464 | |
| 150 | D | A | -0.7420 | |
| 151 | Y | A | 0.0000 | |
| 152 | F | A | -0.2885 | |
| 153 | P | A | 0.0000 | |
| 154 | E | A | -0.4619 | |
| 155 | P | A | -0.6573 | |
| 156 | V | A | -0.5502 | |
| 157 | T | A | -0.5003 | |
| 158 | V | A | -0.1600 | |
| 159 | S | A | -0.4547 | |
| 160 | W | A | 0.0000 | |
| 161 | N | A | -1.0297 | |
| 162 | S | A | -0.7507 | |
| 163 | G | A | -0.5318 | |
| 164 | A | A | -0.2337 | |
| 165 | L | A | -0.0682 | |
| 166 | T | A | -0.1692 | |
| 167 | S | A | -0.2169 | |
| 168 | G | A | -0.2636 | |
| 169 | V | A | 0.1793 | |
| 170 | H | A | -0.1087 | |
| 171 | T | A | -0.0301 | |
| 172 | F | A | 0.0000 | |
| 173 | P | A | -0.1487 | |
| 174 | A | A | 0.1832 | |
| 175 | V | A | 0.0000 | |
| 176 | L | A | 0.7049 | |
| 177 | Q | A | -0.0583 | |
| 178 | S | A | -0.3061 | |
| 179 | S | A | -0.3149 | |
| 180 | G | A | -0.0972 | |
| 181 | L | A | -0.0867 | |
| 182 | Y | A | 0.2009 | |
| 183 | S | A | 0.0000 | |
| 184 | L | A | 0.0000 | |
| 185 | S | A | 0.0000 | |
| 186 | S | A | 0.0000 | |
| 187 | V | A | 0.0000 | |
| 188 | V | A | 0.0000 | |
| 189 | T | A | -0.1881 | |
| 190 | V | A | 0.0000 | |
| 191 | P | A | -0.6671 | |
| 192 | S | A | -0.7842 | |
| 193 | S | A | -0.6806 | |
| 194 | S | A | -0.4573 | |
| 195 | L | A | -0.4184 | |
| 196 | G | A | -0.7472 | |
| 197 | T | A | -0.6798 | |
| 198 | Q | A | -0.9775 | |
| 199 | T | A | -1.0451 | |
| 200 | Y | A | 0.0000 | |
| 201 | T | A | -1.6865 | |
| 202 | C | A | 0.0000 | |
| 203 | N | A | -1.6321 | |
| 204 | V | A | 0.0000 | |
| 205 | D | A | -1.8164 | |
| 206 | H | A | 0.0000 | |
| 207 | K | A | -2.8399 | |
| 208 | P | A | -1.8053 | |
| 209 | S | A | -1.9172 | |
| 210 | N | A | -2.6709 | |
| 211 | T | A | -2.0913 | |
| 212 | K | A | -2.6602 | |
| 213 | V | A | -1.5434 | |
| 214 | D | A | -2.7075 | |
| 215 | K | A | -2.1446 | |
| 216 | R | A | -2.5934 | |
| 217 | V | A | -1.2994 | |
| 218 | E | A | -1.2208 | |
| 219 | S | A | -1.0438 | |
| 1 | S | B | 0.3203 | |
| 2 | Y | B | 0.6749 | |
| 3 | V | B | 1.3136 | |
| 4 | L | B | 0.0000 | |
| 5 | T | B | -0.2223 | |
| 6 | Q | B | -0.3409 | |
| 7 | P | B | 0.2797 | |
| 8 | V | B | 1.1653 | |
| 9 | S | B | 0.1304 | |
| 10 | V | B | -0.0107 | |
| 11 | S | B | -0.2977 | |
| 12 | V | B | 0.0000 | |
| 13 | A | B | -0.4306 | |
| 14 | L | B | -0.6600 | |
| 15 | G | B | -1.3201 | |
| 16 | Q | B | -1.5260 | |
| 17 | T | B | -0.8236 | |
| 18 | A | B | -0.3418 | |
| 19 | T | B | -0.1101 | |
| 20 | I | B | 0.0000 | |
| 21 | T | B | -0.4848 | |
| 22 | C | B | 0.0000 | |
| 23 | E | B | -2.0441 | |
| 24 | G | B | 0.0000 | |
| 25 | E | B | -2.8940 | |
| 26 | Q | B | -3.0844 | |
| 27 | I | B | 0.0000 | |
| 28 | G | B | -2.2240 | |
| 29 | S | B | -1.5973 | |
| 30 | K | B | -1.8272 | |
| 31 | E | B | -1.6912 | |
| 32 | V | B | 0.0000 | |
| 33 | H | B | 0.0000 | |
| 34 | W | B | 0.0000 | |
| 35 | Y | B | 0.0000 | |
| 36 | H | B | 0.0000 | |
| 37 | Q | B | -1.0852 | |
| 38 | R | B | -1.7475 | |
| 39 | P | B | -1.4923 | |
| 40 | G | B | -1.6744 | |
| 41 | Q | B | -2.0460 | |
| 42 | A | B | -1.2399 | |
| 43 | P | B | 0.0000 | |
| 44 | I | B | 0.6797 | |
| 45 | L | B | 0.0000 | |
| 46 | V | B | 0.0000 | |
| 47 | M | B | 0.0000 | |
| 48 | F | B | -1.1738 | |
| 49 | R | B | -1.8989 | |
| 50 | D | B | -1.7932 | |
| 51 | A | B | -1.5625 | |
| 52 | R | B | -2.3940 | |
| 53 | R | B | -2.1755 | |
| 54 | P | B | -0.8975 | |
| 55 | S | B | -0.7642 | |
| 56 | G | B | -0.8376 | |
| 57 | I | B | -1.0157 | |
| 58 | P | B | -1.3903 | |
| 59 | E | B | -2.5115 | |
| 60 | R | B | -1.5534 | |
| 61 | L | B | 0.0000 | |
| 62 | S | B | -1.2354 | |
| 63 | G | B | -0.8774 | |
| 64 | S | B | -0.9450 | |
| 65 | N | B | -1.5136 | |
| 66 | S | B | -1.4319 | |
| 67 | G | B | -2.1634 | |
| 68 | N | B | -3.0419 | |
| 69 | T | B | -1.9353 | |
| 70 | A | B | 0.0000 | |
| 71 | S | B | -0.4967 | |
| 72 | L | B | 0.0000 | |
| 73 | T | B | -0.2958 | |
| 74 | I | B | 0.0000 | |
| 75 | S | B | -1.3148 | |
| 76 | G | B | -1.5659 | |
| 77 | A | B | 0.0000 | |
| 78 | E | B | -1.9772 | |
| 79 | A | B | -1.0973 | |
| 80 | G | B | -1.1022 | |
| 81 | D | B | 0.0000 | |
| 82 | E | B | 0.0000 | |
| 83 | G | B | 0.0000 | |
| 84 | D | B | -1.3265 | |
| 85 | Y | B | 0.0000 | |
| 86 | Y | B | 0.0000 | |
| 87 | C | B | 0.0000 | |
| 88 | Q | B | 0.0000 | |
| 89 | V | B | 0.0000 | |
| 90 | W | B | 0.2392 | |
| 91 | D | B | -0.1608 | |
| 92 | S | B | -0.2441 | |
| 93 | S | B | -0.2676 | |
| 94 | S | B | -0.0450 | |
| 95 | Y | B | 0.4558 | |
| 96 | T | B | 0.0000 | |
| 97 | V | B | 0.6060 | |
| 98 | F | B | 0.3527 | |
| 99 | G | B | 0.0000 | |
| 100 | G | B | -0.4859 | |
| 101 | G | B | -0.6289 | |
| 102 | T | B | 0.0000 | |
| 103 | K | B | -1.2995 | |
| 104 | V | B | 0.0000 | |
| 105 | T | B | -0.2320 | |
| 106 | V | B | 0.0000 | |
| 107 | V | B | 0.2508 | |
| 108 | G | B | -0.4460 | |
| 109 | Q | B | -0.8381 | |
| 110 | P | B | -1.1212 | |
| 111 | K | B | -2.3311 | |
| 112 | A | B | -1.3697 | |
| 113 | A | B | -0.8831 | |
| 114 | P | B | -0.4656 | |
| 115 | S | B | -0.2992 | |
| 116 | V | B | 0.0000 | |
| 117 | T | B | -0.4203 | |
| 118 | L | B | 0.0000 | |
| 119 | F | B | 0.0000 | |
| 120 | P | B | 0.0000 | |
| 121 | P | B | 0.0000 | |
| 122 | S | B | -0.6831 | |
| 123 | S | B | -1.1115 | |
| 124 | E | B | -2.0849 | |
| 125 | E | B | 0.0000 | |
| 126 | L | B | -1.7897 | |
| 127 | Q | B | -2.1854 | |
| 128 | A | B | -1.7556 | |
| 129 | N | B | -2.4942 | |
| 130 | K | B | -2.3532 | |
| 131 | A | B | 0.0000 | |
| 132 | T | B | 0.0000 | |
| 133 | L | B | 0.0000 | |
| 134 | V | B | 0.0000 | |
| 135 | C | B | 0.0000 | |
| 136 | L | B | 0.0000 | |
| 137 | I | B | 0.0000 | |
| 138 | S | B | -0.6127 | |
| 139 | D | B | -1.4470 | |
| 140 | F | B | 0.0000 | |
| 141 | Y | B | 0.0000 | |
| 142 | P | B | -0.9371 | |
| 143 | G | B | -0.4444 | |
| 144 | A | B | -0.2252 | |
| 145 | V | B | -0.1165 | |
| 146 | T | B | -0.0999 | |
| 147 | V | B | 0.1982 | |
| 148 | A | B | -0.3851 | |
| 149 | W | B | 0.0000 | |
| 150 | K | B | -0.9516 | |
| 151 | A | B | 0.0000 | |
| 152 | D | B | -1.1685 | |
| 153 | S | B | -0.6380 | |
| 154 | S | B | -0.7774 | |
| 155 | P | B | -0.9110 | |
| 156 | V | B | -0.8589 | |
| 157 | K | B | -1.6370 | |
| 158 | A | B | -0.8651 | |
| 159 | G | B | -0.6702 | |
| 160 | V | B | -0.3882 | |
| 161 | E | B | -0.6601 | |
| 162 | T | B | -0.2096 | |
| 163 | T | B | 0.0000 | |
| 164 | T | B | -0.1878 | |
| 165 | P | B | -0.2456 | |
| 166 | S | B | -0.5343 | |
| 167 | K | B | -1.2545 | |
| 168 | Q | B | -1.3328 | |
| 169 | S | B | -1.4275 | |
| 170 | N | B | -1.8644 | |
| 171 | N | B | -1.5857 | |
| 172 | K | B | -1.6702 | |
| 173 | Y | B | -0.8474 | |
| 174 | A | B | 0.0000 | |
| 175 | A | B | 0.0000 | |
| 176 | S | B | 0.0000 | |
| 177 | S | B | 0.0000 | |
| 178 | Y | B | 0.0000 | |
| 179 | L | B | 0.0000 | |
| 180 | S | B | -0.6431 | |
| 181 | L | B | 0.0000 | |
| 182 | T | B | -1.8055 | |
| 183 | P | B | 0.0000 | |
| 184 | E | B | -3.1353 | |
| 185 | Q | B | -2.3789 | |
| 186 | W | B | 0.0000 | |
| 187 | K | B | -3.0306 | |
| 188 | S | B | -2.3928 | |
| 189 | H | B | -2.2947 | |
| 190 | R | B | -2.6590 | |
| 191 | S | B | -1.7054 | |
| 192 | Y | B | 0.0000 | |
| 193 | S | B | -0.9585 | |
| 194 | C | B | 0.0000 | |
| 195 | Q | B | -0.8359 | |
| 196 | V | B | 0.0000 | |
| 197 | T | B | -0.5845 | |
| 198 | H | B | 0.0000 | |
| 199 | E | B | -2.3409 | |
| 200 | G | B | -1.4563 | |
| 201 | S | B | -0.7907 | |
| 202 | T | B | -0.5054 | |
| 203 | V | B | -0.2074 | |
| 204 | E | B | -1.6324 | |
| 205 | K | B | -1.3338 | |
| 206 | T | B | -1.0317 | |
| 207 | V | B | 0.0000 | |
| 208 | A | B | -1.4522 | |
| 209 | P | B | -1.3824 | |
| 210 | T | B | -1.4040 | |
| 211 | E | B | -1.8733 | |
| 212 | C | B | -0.3182 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine