Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYTFTDYTIHWVRQATGQGLEWMGWIYPLRGSINYAQKFQGRVTMTADKSISTVYMELSSLRSEDTAVYFCARHGAYYSNAFDYWGQGTLVTVSS
L: EIVMTQSPATLSVSPGERATLSCRASESVDNDGIRFLHWYQQKPGQAPRLLIYRASTRATGIPARFSGSGSRTEFTLTISSLQSEDFAVYYCQQSNKDPYTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:18) [INFO] Main: Simulation completed successfully. (00:02:20) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.4695 | |
2 | V | H | -1.0129 | |
3 | Q | H | -1.3075 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.1039 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5327 | |
8 | G | H | -0.5186 | |
9 | A | H | 0.1803 | |
11 | E | H | 0.0213 | |
12 | V | H | 1.0075 | |
13 | K | H | -0.8405 | |
14 | K | H | -2.0616 | |
15 | P | H | -2.0858 | |
16 | G | H | -1.4458 | |
17 | A | H | -1.1333 | |
18 | S | H | -1.2419 | |
19 | V | H | 0.0000 | |
20 | K | H | -1.8764 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.4755 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.3864 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.6387 | |
27 | G | H | -1.0526 | |
28 | Y | H | -0.5536 | |
29 | T | H | -0.3107 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.9016 | |
36 | D | H | -0.9169 | |
37 | Y | H | 0.1725 | |
38 | T | H | 0.3857 | |
39 | I | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.5039 | |
45 | A | H | -0.8505 | |
46 | T | H | -0.5816 | |
47 | G | H | -1.1254 | |
48 | Q | H | -1.6903 | |
49 | G | H | -1.0915 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.7782 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | W | H | 0.4854 | |
56 | I | H | 0.0000 | |
57 | Y | H | 0.0037 | |
58 | P | H | 0.0000 | |
59 | L | H | -0.9683 | |
62 | R | H | -1.8381 | |
63 | G | H | -1.0000 | |
64 | S | H | -0.2585 | |
65 | I | H | 0.6476 | |
66 | N | H | -0.0753 | |
67 | Y | H | -0.7929 | |
68 | A | H | 0.0000 | |
69 | Q | H | -2.8123 | |
70 | K | H | -2.7464 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.4971 | |
74 | G | H | -1.6567 | |
75 | R | H | -1.5334 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.5730 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.3267 | |
80 | A | H | -0.7049 | |
81 | D | H | -1.0241 | |
82 | K | H | -1.3757 | |
83 | S | H | -0.2168 | |
84 | I | H | 0.9040 | |
85 | S | H | -0.2408 | |
86 | T | H | 0.0000 | |
87 | V | H | 0.0000 | |
88 | Y | H | -0.4697 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.1040 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.0354 | |
93 | S | H | -1.1471 | |
94 | L | H | 0.0000 | |
95 | R | H | -2.6822 | |
96 | S | H | -2.1670 | |
97 | E | H | -2.4243 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6769 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.4145 | |
102 | Y | H | 0.0000 | |
103 | F | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | H | H | 0.0000 | |
108 | G | H | 0.3081 | |
109 | A | H | 0.7844 | |
110 | Y | H | 1.7889 | |
111 | Y | H | 1.8721 | |
112 | S | H | 0.7519 | |
113 | N | H | 0.1328 | |
114 | A | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | -0.5469 | |
117 | Y | H | -0.4161 | |
118 | W | H | -0.4314 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.2565 | |
121 | G | H | -0.5013 | |
122 | T | H | 0.0000 | |
123 | L | H | 0.7214 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.0977 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.0422 | |
128 | S | H | -0.9077 | |
1 | E | L | -2.1985 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.5685 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.6502 | |
6 | Q | L | -0.7117 | |
7 | S | L | -0.8063 | |
8 | P | L | -0.4852 | |
9 | A | L | -0.4872 | |
10 | T | L | -0.6168 | |
11 | L | L | -0.2353 | |
12 | S | L | -0.2824 | |
13 | V | L | 0.0000 | |
14 | S | L | -1.3165 | |
15 | P | L | -1.4524 | |
16 | G | L | -2.0406 | |
17 | E | L | -3.0964 | |
18 | R | L | -2.9307 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.5448 | |
21 | L | L | 0.0000 | |
22 | S | L | -0.8561 | |
23 | C | L | 0.0000 | |
24 | R | L | -2.5803 | |
25 | A | L | 0.0000 | |
26 | S | L | -1.4470 | |
27 | E | L | -2.6005 | |
28 | S | L | -2.6692 | |
29 | V | L | 0.0000 | |
30 | D | L | -2.5062 | |
31 | N | L | -2.6759 | |
34 | D | L | -2.6022 | |
35 | G | L | -1.8946 | |
36 | I | L | -1.2308 | |
37 | R | L | -1.6122 | |
38 | F | L | -0.8452 | |
39 | L | L | 0.0000 | |
40 | H | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.3685 | |
46 | P | L | -0.9448 | |
47 | G | L | -1.3997 | |
48 | Q | L | -2.0228 | |
49 | A | L | -1.3032 | |
50 | P | L | 0.0000 | |
51 | R | L | -1.4750 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | -0.3002 | |
56 | R | L | -0.5995 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5894 | |
66 | T | L | -0.7014 | |
67 | R | L | -1.1863 | |
68 | A | L | -0.8442 | |
69 | T | L | -0.6081 | |
70 | G | L | -0.6692 | |
71 | I | L | 0.0000 | |
72 | P | L | -0.4293 | |
74 | A | L | -0.3682 | |
75 | R | L | -0.6276 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.4582 | |
78 | G | L | 0.0000 | |
79 | S | L | -0.5693 | |
80 | G | L | -1.3578 | |
83 | S | L | -1.9769 | |
84 | R | L | -3.1854 | |
85 | T | L | -2.6862 | |
86 | E | L | -2.4547 | |
87 | F | L | 0.0000 | |
88 | T | L | -0.6782 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.5578 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.3749 | |
93 | S | L | -1.8153 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.6885 | |
96 | S | L | -0.9958 | |
97 | E | L | -1.6009 | |
98 | D | L | 0.0000 | |
99 | F | L | -0.3178 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.4453 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | S | L | 0.0000 | |
108 | N | L | -1.7814 | |
109 | K | L | -2.5014 | |
114 | D | L | -2.0353 | |
115 | P | L | -1.8563 | |
116 | Y | L | 0.0000 | |
117 | T | L | -0.4818 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.7428 | |
121 | G | L | -0.8124 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.2373 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.1097 | |
126 | I | L | 0.7292 | |
127 | K | L | -1.0460 |