| Chain sequence(s) |
A: LFTFLC
C: LFTFLC B: LFTFLC E: LFTFLC D: LFTFLC G: LFTFLC F: LFTFLC I: LFTFLC H: LFTFLC J: LFTFLC input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,J |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | E | 2.4509 | |
| 2 | F | E | 2.1667 | |
| 3 | T | E | 1.5524 | |
| 4 | F | E | 0.0000 | |
| 5 | L | E | 2.1456 | |
| 6 | C | E | 1.9775 | |
| 1 | L | G | 2.1499 | |
| 2 | F | G | 2.5407 | |
| 3 | T | G | 0.0000 | |
| 4 | F | G | 2.3069 | |
| 5 | L | G | 2.4279 | |
| 6 | C | G | 2.3647 | |
| 1 | L | B | 2.5063 | |
| 2 | F | B | 3.2211 | |
| 3 | T | B | 2.7517 | |
| 4 | F | B | 3.6521 | |
| 5 | L | B | 3.1892 | |
| 6 | C | B | 2.4627 | |
| 1 | L | D | 2.8617 | |
| 2 | F | D | 2.9071 | |
| 3 | T | D | 0.0000 | |
| 4 | F | D | 0.0000 | |
| 5 | L | D | 2.6549 | |
| 6 | C | D | 2.2444 | |
| 1 | L | A | 3.0876 | |
| 2 | F | A | 3.4211 | |
| 3 | T | A | 2.4314 | |
| 4 | F | A | 2.5340 | |
| 5 | L | A | 2.6405 | |
| 6 | C | A | 2.1004 | |
| 1 | L | C | 2.1099 | |
| 2 | F | C | 2.3344 | |
| 3 | T | C | 0.0000 | |
| 4 | F | C | 2.5742 | |
| 5 | L | C | 2.8958 | |
| 6 | C | C | 2.6997 | |
| 1 | L | F | 1.9037 | |
| 2 | F | F | 2.2212 | |
| 3 | T | F | 0.0000 | |
| 4 | F | F | 2.3422 | |
| 5 | L | F | 2.5889 | |
| 6 | C | F | 2.3826 | |
| 1 | L | H | 2.7948 | |
| 2 | F | H | 2.8082 | |
| 3 | T | H | 2.4532 | |
| 4 | F | H | 0.0000 | |
| 5 | L | H | 2.7094 | |
| 6 | C | H | 2.4779 | |
| 1 | L | J | 3.2568 | |
| 2 | F | J | 3.3634 | |
| 3 | T | J | 2.6305 | |
| 4 | F | J | 3.0944 | |
| 5 | L | J | 3.1989 | |
| 6 | C | J | 2.2687 | |
| 1 | L | I | 2.5637 | |
| 2 | F | I | 2.3328 | |
| 3 | T | I | 2.0480 | |
| 4 | F | I | 2.7054 | |
| 5 | L | I | 3.1002 | |
| 6 | C | I | 2.2892 |