| Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | C |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | YS80C,TH91C,WG47C,GI53C,SP85C,SC25C,RM67C,DF73C,RN98C,DK62C,DV108C,SY119C,GT113C,EA1C,WQ36C,SN7C,GR106C,GR15C,LR4C |
| Energy difference between WT (input) and mutated protein (by FoldX) | 43.6936 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:00:25)
[INFO] FoldX: Starting FoldX energy minimalization (00:05:28)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:01)
[INFO] Main: Simulation completed successfully. (00:06:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | C | 0.1613 | mutated: EA1C |
| 2 | V | C | 0.4797 | |
| 3 | Q | C | -0.6006 | |
| 4 | R | C | 0.0000 | mutated: LR4C |
| 5 | V | C | 0.0256 | |
| 6 | E | C | 0.0000 | |
| 7 | N | C | -1.6332 | mutated: SN7C |
| 8 | G | C | -1.4636 | |
| 9 | G | C | -0.4464 | |
| 10 | G | C | 0.4864 | |
| 11 | L | C | 1.3060 | |
| 12 | V | C | 0.0033 | |
| 13 | Q | C | -1.0682 | |
| 14 | P | C | -1.3841 | |
| 15 | R | C | -2.4915 | mutated: GR15C |
| 16 | G | C | -1.4797 | |
| 17 | S | C | -1.3479 | |
| 18 | L | C | -0.9668 | |
| 19 | R | C | -2.2871 | |
| 20 | L | C | 0.0000 | |
| 21 | S | C | -1.0816 | |
| 22 | C | C | 0.0000 | |
| 23 | A | C | -0.3406 | |
| 24 | A | C | 0.0000 | |
| 25 | C | C | 0.9388 | mutated: SC25C |
| 26 | D | C | 0.0000 | |
| 27 | F | C | 1.7956 | |
| 28 | T | C | 0.5036 | |
| 29 | F | C | 0.0000 | |
| 30 | R | C | -1.4627 | |
| 31 | S | C | -0.4985 | |
| 32 | Y | C | -0.7594 | |
| 33 | E | C | -0.7766 | |
| 34 | M | C | 0.0000 | |
| 35 | S | C | 0.0000 | |
| 36 | Q | C | 0.0000 | mutated: WQ36C |
| 37 | V | C | 0.0000 | |
| 38 | R | C | 0.0000 | |
| 39 | Q | C | -0.5796 | |
| 40 | A | C | -1.1388 | |
| 41 | P | C | -1.3568 | |
| 42 | G | C | -1.4527 | |
| 43 | K | C | -2.1806 | |
| 44 | G | C | -1.1678 | |
| 45 | L | C | -0.0651 | |
| 46 | E | C | -0.9310 | |
| 47 | G | C | -0.5833 | mutated: WG47C |
| 48 | V | C | 0.0000 | |
| 49 | S | C | 0.0000 | |
| 50 | A | C | 0.3848 | |
| 51 | I | C | 0.0000 | |
| 52 | S | C | -0.1553 | |
| 53 | I | C | -0.3217 | mutated: GI53C |
| 54 | S | C | -0.6072 | |
| 55 | G | C | -0.5919 | |
| 56 | G | C | -0.6149 | |
| 57 | S | C | -0.1320 | |
| 58 | T | C | 0.3696 | |
| 59 | Y | C | 0.9504 | |
| 60 | Y | C | -0.2488 | |
| 61 | A | C | -1.1794 | |
| 62 | K | C | -2.1789 | mutated: DK62C |
| 63 | S | C | -1.5817 | |
| 64 | V | C | 0.0000 | |
| 65 | K | C | -2.2359 | |
| 66 | G | C | -1.5066 | |
| 67 | M | C | -0.8286 | mutated: RM67C |
| 68 | F | C | 0.0000 | |
| 69 | T | C | -0.5443 | |
| 70 | I | C | 0.0000 | |
| 71 | S | C | -0.1513 | |
| 72 | R | C | -0.3502 | |
| 73 | F | C | 0.0054 | mutated: DF73C |
| 74 | N | C | -1.2213 | |
| 75 | S | C | -1.2081 | |
| 76 | K | C | -1.7275 | |
| 77 | N | C | -0.9534 | |
| 78 | T | C | -0.5626 | |
| 79 | L | C | 0.0000 | |
| 80 | S | C | -0.5886 | mutated: YS80C |
| 81 | L | C | 0.0000 | |
| 82 | Q | C | -1.0715 | |
| 83 | M | C | 0.0000 | |
| 84 | N | C | -1.3048 | |
| 85 | P | C | -1.5058 | mutated: SP85C |
| 86 | L | C | 0.0000 | |
| 87 | R | C | -1.6045 | |
| 88 | A | C | -1.1929 | |
| 89 | E | C | -1.9353 | |
| 90 | D | C | 0.0000 | |
| 91 | H | C | -0.3539 | mutated: TH91C |
| 92 | A | C | 0.0000 | |
| 93 | I | C | 0.7509 | |
| 94 | Y | C | 0.0000 | |
| 95 | Y | C | 0.4405 | |
| 96 | C | C | 0.0000 | |
| 97 | A | C | 0.0000 | |
| 98 | N | C | 0.0000 | mutated: RN98C |
| 99 | L | C | 0.0000 | |
| 100 | R | C | -3.2514 | |
| 101 | D | C | -3.4630 | |
| 102 | G | C | -2.3140 | |
| 103 | F | C | -1.4998 | |
| 104 | N | C | -2.9056 | |
| 105 | K | C | -3.8790 | |
| 106 | R | C | -3.3910 | mutated: GR106C |
| 107 | F | C | -1.4234 | |
| 108 | V | C | -0.1394 | mutated: DV108C |
| 109 | Y | C | 0.5146 | |
| 110 | W | C | 0.7625 | |
| 111 | G | C | -0.1453 | |
| 112 | Q | C | -1.0803 | |
| 113 | T | C | -0.1292 | mutated: GT113C |
| 114 | T | C | 0.1429 | |
| 115 | L | C | 1.3074 | |
| 116 | V | C | 0.0000 | |
| 117 | T | C | 0.5251 | |
| 118 | V | C | 0.0000 | |
| 119 | Y | C | 0.7731 | mutated: SY119C |
| 120 | S | C | -0.1681 |