Chain sequence(s) |
C: EVQLVESGGGLVQPGGSLRLSCAASDFTFRSYEMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARLRDGFNKGFDYWGQGTLVTVSS
input PDB |
Selected Chain(s) | C |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | YS80C,TH91C,WG47C,GI53C,SP85C,SC25C,RM67C,DF73C,RN98C,DK62C,DV108C,SY119C,GT113C,EA1C,WQ36C,SN7C,GR106C,GR15C,LR4C |
Energy difference between WT (input) and mutated protein (by FoldX) | 43.6936 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with C chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:25) [INFO] FoldX: Starting FoldX energy minimalization (00:05:28) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:01) [INFO] Main: Simulation completed successfully. (00:06:02) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | C | 0.1613 | mutated: EA1C |
2 | V | C | 0.4797 | |
3 | Q | C | -0.6006 | |
4 | R | C | 0.0000 | mutated: LR4C |
5 | V | C | 0.0256 | |
6 | E | C | 0.0000 | |
7 | N | C | -1.6332 | mutated: SN7C |
8 | G | C | -1.4636 | |
9 | G | C | -0.4464 | |
10 | G | C | 0.4864 | |
11 | L | C | 1.3060 | |
12 | V | C | 0.0033 | |
13 | Q | C | -1.0682 | |
14 | P | C | -1.3841 | |
15 | R | C | -2.4915 | mutated: GR15C |
16 | G | C | -1.4797 | |
17 | S | C | -1.3479 | |
18 | L | C | -0.9668 | |
19 | R | C | -2.2871 | |
20 | L | C | 0.0000 | |
21 | S | C | -1.0816 | |
22 | C | C | 0.0000 | |
23 | A | C | -0.3406 | |
24 | A | C | 0.0000 | |
25 | C | C | 0.9388 | mutated: SC25C |
26 | D | C | 0.0000 | |
27 | F | C | 1.7956 | |
28 | T | C | 0.5036 | |
29 | F | C | 0.0000 | |
30 | R | C | -1.4627 | |
31 | S | C | -0.4985 | |
32 | Y | C | -0.7594 | |
33 | E | C | -0.7766 | |
34 | M | C | 0.0000 | |
35 | S | C | 0.0000 | |
36 | Q | C | 0.0000 | mutated: WQ36C |
37 | V | C | 0.0000 | |
38 | R | C | 0.0000 | |
39 | Q | C | -0.5796 | |
40 | A | C | -1.1388 | |
41 | P | C | -1.3568 | |
42 | G | C | -1.4527 | |
43 | K | C | -2.1806 | |
44 | G | C | -1.1678 | |
45 | L | C | -0.0651 | |
46 | E | C | -0.9310 | |
47 | G | C | -0.5833 | mutated: WG47C |
48 | V | C | 0.0000 | |
49 | S | C | 0.0000 | |
50 | A | C | 0.3848 | |
51 | I | C | 0.0000 | |
52 | S | C | -0.1553 | |
53 | I | C | -0.3217 | mutated: GI53C |
54 | S | C | -0.6072 | |
55 | G | C | -0.5919 | |
56 | G | C | -0.6149 | |
57 | S | C | -0.1320 | |
58 | T | C | 0.3696 | |
59 | Y | C | 0.9504 | |
60 | Y | C | -0.2488 | |
61 | A | C | -1.1794 | |
62 | K | C | -2.1789 | mutated: DK62C |
63 | S | C | -1.5817 | |
64 | V | C | 0.0000 | |
65 | K | C | -2.2359 | |
66 | G | C | -1.5066 | |
67 | M | C | -0.8286 | mutated: RM67C |
68 | F | C | 0.0000 | |
69 | T | C | -0.5443 | |
70 | I | C | 0.0000 | |
71 | S | C | -0.1513 | |
72 | R | C | -0.3502 | |
73 | F | C | 0.0054 | mutated: DF73C |
74 | N | C | -1.2213 | |
75 | S | C | -1.2081 | |
76 | K | C | -1.7275 | |
77 | N | C | -0.9534 | |
78 | T | C | -0.5626 | |
79 | L | C | 0.0000 | |
80 | S | C | -0.5886 | mutated: YS80C |
81 | L | C | 0.0000 | |
82 | Q | C | -1.0715 | |
83 | M | C | 0.0000 | |
84 | N | C | -1.3048 | |
85 | P | C | -1.5058 | mutated: SP85C |
86 | L | C | 0.0000 | |
87 | R | C | -1.6045 | |
88 | A | C | -1.1929 | |
89 | E | C | -1.9353 | |
90 | D | C | 0.0000 | |
91 | H | C | -0.3539 | mutated: TH91C |
92 | A | C | 0.0000 | |
93 | I | C | 0.7509 | |
94 | Y | C | 0.0000 | |
95 | Y | C | 0.4405 | |
96 | C | C | 0.0000 | |
97 | A | C | 0.0000 | |
98 | N | C | 0.0000 | mutated: RN98C |
99 | L | C | 0.0000 | |
100 | R | C | -3.2514 | |
101 | D | C | -3.4630 | |
102 | G | C | -2.3140 | |
103 | F | C | -1.4998 | |
104 | N | C | -2.9056 | |
105 | K | C | -3.8790 | |
106 | R | C | -3.3910 | mutated: GR106C |
107 | F | C | -1.4234 | |
108 | V | C | -0.1394 | mutated: DV108C |
109 | Y | C | 0.5146 | |
110 | W | C | 0.7625 | |
111 | G | C | -0.1453 | |
112 | Q | C | -1.0803 | |
113 | T | C | -0.1292 | mutated: GT113C |
114 | T | C | 0.1429 | |
115 | L | C | 1.3074 | |
116 | V | C | 0.0000 | |
117 | T | C | 0.5251 | |
118 | V | C | 0.0000 | |
119 | Y | C | 0.7731 | mutated: SY119C |
120 | S | C | -0.1681 |