| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTTPVHCGADDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRCGPEGHPLPSGPPPSPLYTPPPPGSPYAVRPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLATPAPNVYDPSYFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9420 | |
| 2 | L | A | 1.9630 | |
| 3 | P | A | 0.6592 | |
| 4 | P | A | 0.3787 | |
| 5 | T | A | 0.1293 | |
| 6 | T | A | 0.1374 | |
| 7 | P | A | 0.1824 | |
| 8 | V | A | 1.2393 | |
| 9 | A | A | 0.0949 | |
| 10 | K | A | -1.0089 | |
| 11 | V | A | -0.1395 | |
| 12 | Q | A | -1.3917 | |
| 13 | S | A | -1.5459 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4199 | |
| 16 | E | A | -2.4386 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4574 | |
| 20 | P | A | 0.1279 | |
| 21 | T | A | 0.1602 | |
| 22 | S | A | -0.0936 | |
| 23 | L | A | 0.0960 | |
| 24 | F | A | -0.0246 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1784 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7717 | |
| 31 | R | A | -2.6538 | |
| 32 | L | A | -0.7830 | |
| 33 | L | A | 1.1624 | |
| 34 | T | A | 1.3611 | |
| 35 | V | A | 1.8069 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2702 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6760 | |
| 40 | E | A | -1.7891 | |
| 41 | D | A | -0.7694 | |
| 42 | I | A | 1.2498 | |
| 43 | V | A | 2.1758 | |
| 44 | V | A | 1.6421 | |
| 45 | N | A | -0.5531 | |
| 46 | G | A | -0.3796 | |
| 47 | K | A | -0.1511 | |
| 48 | V | A | 1.9822 | |
| 49 | L | A | 2.5178 | |
| 50 | V | A | 1.4160 | |
| 51 | P | A | 0.2932 | |
| 52 | K | A | -0.7409 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1342 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3716 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2371 | |
| 70 | K | A | -1.7878 | |
| 71 | F | A | -0.6371 | |
| 72 | A | A | -0.5789 | |
| 73 | L | A | -0.8661 | |
| 74 | P | A | -1.2065 | |
| 75 | Q | A | -2.5049 | |
| 76 | K | A | -3.1086 | |
| 77 | D | A | -2.9930 | |
| 78 | F | A | -1.6725 | |
| 79 | Y | A | -1.8961 | |
| 80 | D | A | -2.7026 | |
| 81 | P | A | -2.3128 | |
| 82 | E | A | -3.0555 | |
| 83 | K | A | -3.4032 | |
| 84 | E | A | -2.4680 | |
| 85 | R | A | -1.2991 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6572 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9652 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3581 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6940 | |
| 99 | G | A | -0.5263 | |
| 100 | P | A | -0.3815 | |
| 101 | L | A | 0.0899 | |
| 102 | G | A | -0.1945 | |
| 103 | K | A | -0.6178 | |
| 104 | G | A | -0.4504 | |
| 105 | T | A | -0.4472 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1549 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4316 | |
| 110 | L | A | 0.3027 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1040 | |
| 113 | K | A | -0.4081 | |
| 114 | L | A | -0.7418 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.2469 | |
| 117 | T | A | -0.8872 | |
| 118 | E | A | -1.8126 | |
| 119 | N | A | -2.0164 | |
| 120 | P | A | -1.3994 | |
| 121 | T | A | -0.7630 | |
| 122 | T | A | -0.5137 | |
| 123 | P | A | 0.0938 | |
| 124 | V | A | 0.1127 | |
| 125 | H | A | -0.2181 | |
| 126 | C | A | -0.4757 | |
| 127 | G | A | -1.1687 | |
| 128 | A | A | -1.1742 | |
| 129 | D | A | -2.1974 | |
| 130 | D | A | -1.7374 | |
| 131 | R | A | -1.1373 | |
| 132 | V | A | 0.2335 | |
| 133 | A | A | 0.4628 | |
| 134 | F | A | 0.3088 | |
| 135 | S | A | -0.0548 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.4651 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5595 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1929 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1636 | |
| 157 | D | A | 0.3423 | |
| 158 | L | A | 0.8151 | |
| 159 | A | A | 0.1804 | |
| 160 | E | A | -1.4508 | |
| 161 | P | A | -0.2094 | |
| 162 | C | A | 0.1874 | |
| 163 | P | A | -0.1727 | |
| 164 | G | A | -0.0816 | |
| 165 | L | A | 0.5880 | |
| 166 | P | A | -0.1228 | |
| 167 | P | A | -0.3430 | |
| 168 | G | A | -0.4550 | |
| 169 | A | A | -0.0352 | |
| 170 | C | A | 0.6506 | |
| 171 | P | A | 0.5289 | |
| 172 | P | A | 0.7665 | |
| 173 | I | A | 2.0320 | |
| 174 | Q | A | 0.8716 | |
| 175 | L | A | 1.4955 | |
| 176 | V | A | 0.8617 | |
| 177 | N | A | -0.2971 | |
| 178 | S | A | 0.0273 | |
| 179 | V | A | 0.4320 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3829 | |
| 182 | D | A | 0.0867 | |
| 183 | G | A | -0.1544 | |
| 184 | D | A | -0.5316 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1170 | |
| 190 | F | A | 0.0661 | |
| 191 | G | A | -0.1030 | |
| 192 | N | A | -0.2574 | |
| 193 | M | A | -0.1050 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3984 | |
| 197 | E | A | -2.5930 | |
| 198 | L | A | -1.2247 | |
| 199 | Q | A | -2.5635 | |
| 200 | Q | A | -3.3208 | |
| 201 | D | A | -3.5875 | |
| 202 | R | A | -3.3395 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1829 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3477 | |
| 211 | S | A | -1.8971 | |
| 212 | T | A | -1.4269 | |
| 213 | R | A | -2.0737 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1594 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3786 | |
| 220 | L | A | 0.6196 | |
| 221 | K | A | -1.0835 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8112 | |
| 224 | N | A | -1.4864 | |
| 225 | E | A | -1.2276 | |
| 226 | A | A | -0.5993 | |
| 227 | Y | A | -0.3723 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6719 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0734 | |
| 234 | F | A | 0.2546 | |
| 235 | G | A | -0.8003 | |
| 236 | R | A | -2.5678 | |
| 237 | R | A | -2.7909 | |
| 238 | E | A | -2.1042 | |
| 239 | Q | A | -0.1827 | |
| 240 | V | A | 1.4034 | |
| 241 | Y | A | 1.1257 | |
| 242 | A | A | 0.2636 | |
| 243 | R | A | -0.8376 | |
| 244 | H | A | -0.9138 | |
| 245 | F | A | 0.0625 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5834 | |
| 249 | C | A | -0.8520 | |
| 250 | G | A | -0.9025 | |
| 251 | P | A | -0.9313 | |
| 252 | E | A | -1.3406 | |
| 253 | G | A | -1.2843 | |
| 254 | H | A | -1.4761 | |
| 255 | P | A | -1.1282 | |
| 256 | L | A | -0.0061 | |
| 257 | P | A | -0.1676 | |
| 258 | S | A | -0.2831 | |
| 259 | G | A | -0.3888 | |
| 260 | P | A | -0.6416 | |
| 261 | P | A | -0.4820 | |
| 262 | P | A | -0.3532 | |
| 263 | S | A | 0.0706 | |
| 264 | P | A | 0.3986 | |
| 265 | L | A | 1.5058 | |
| 266 | Y | A | 0.9057 | |
| 267 | T | A | 0.0763 | |
| 268 | P | A | -0.1124 | |
| 269 | P | A | 0.0465 | |
| 270 | P | A | -0.4196 | |
| 271 | P | A | -0.4952 | |
| 272 | G | A | -0.2915 | |
| 273 | S | A | 0.2045 | |
| 274 | P | A | 0.4267 | |
| 275 | Y | A | 1.3549 | |
| 276 | A | A | 0.9934 | |
| 277 | V | A | 1.7137 | |
| 278 | R | A | 0.5020 | |
| 279 | P | A | -0.0169 | |
| 280 | P | A | 0.0000 | |
| 281 | T | A | -0.5955 | |
| 282 | D | A | -1.0786 | |
| 283 | Y | A | 0.7513 | |
| 284 | F | A | 0.6517 | |
| 285 | G | A | 0.2736 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9371 | |
| 291 | L | A | 1.6226 | |
| 292 | V | A | 0.6487 | |
| 293 | S | A | -0.1437 | |
| 294 | S | A | -0.9501 | |
| 295 | D | A | -1.8414 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0800 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6212 | |
| 301 | R | A | -1.8219 | |
| 302 | P | A | -0.9710 | |
| 303 | F | A | -0.1891 | |
| 304 | W | A | -0.5689 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0872 | |
| 307 | R | A | -2.8394 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2778 | |
| 310 | G | A | -1.2281 | |
| 311 | N | A | -1.2661 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7487 | |
| 319 | N | A | -0.8278 | |
| 320 | E | A | -1.0227 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3287 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0700 | |
| 333 | N | A | 0.5622 | |
| 334 | F | A | 1.7765 | |
| 335 | T | A | 0.8758 | |
| 336 | I | A | 0.3985 | |
| 337 | S | A | -0.9967 | |
| 338 | Q | A | -1.7733 | |
| 339 | Q | A | -1.3221 | |
| 340 | L | A | 0.5887 | |
| 341 | A | A | 0.3618 | |
| 342 | T | A | -0.0955 | |
| 343 | P | A | -0.4297 | |
| 344 | A | A | 0.0107 | |
| 345 | P | A | 0.1530 | |
| 346 | N | A | -0.2612 | |
| 347 | V | A | 1.6581 | |
| 348 | Y | A | 1.6221 | |
| 349 | D | A | 0.3459 | |
| 350 | P | A | -0.3794 | |
| 351 | S | A | -0.1125 | |
| 352 | Y | A | 0.4825 | |
| 353 | F | A | -0.7060 | |
| 354 | K | A | -1.8961 | |
| 355 | N | A | -1.8643 | |
| 356 | Y | A | -0.1508 | |
| 357 | L | A | 0.6400 | |
| 358 | R | A | 0.9626 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3858 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0860 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0499 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6971 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2796 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3212 | |
| 376 | L | A | -1.7192 | |
| 377 | D | A | -1.9986 | |
| 378 | P | A | -1.0414 | |
| 379 | G | A | -1.0136 | |
| 380 | V | A | -0.9317 | |
| 381 | L | A | -0.5272 | |
| 382 | A | A | -0.6488 | |
| 383 | H | A | -0.7946 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3870 | |
| 386 | T | A | -0.5394 | |
| 387 | M | A | -0.2927 | |
| 388 | N | A | -0.8602 | |
| 389 | P | A | -1.2173 | |
| 390 | T | A | -1.3881 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.3788 | |
| 393 | E | A | -2.7079 | |
| 394 | N | A | -2.3984 | |
| 395 | W | A | -1.2956 | |
| 396 | N | A | -1.0739 | |
| 397 | L | A | -0.2048 | |
| 398 | G | A | 0.5296 | |
| 399 | F | A | 2.4130 | |
| 400 | V | A | 1.8312 | |
| 401 | P | A | 0.0461 | |
| 402 | P | A | -1.7640 | |
| 403 | K | A | -3.2949 | |
| 404 | E | A | -3.8056 | |
| 405 | R | A | -3.8081 | |
| 406 | E | A | -3.7477 | |
| 407 | D | A | -2.8513 | |
| 408 | P | A | -1.7533 | |
| 409 | Y | A | -0.9848 | |
| 410 | K | A | -2.1158 | |
| 411 | G | A | -0.6304 | |
| 412 | L | A | 0.6839 | |
| 413 | I | A | 1.5977 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3744 | |
| 416 | E | A | -1.6521 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8573 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8822 | |
| 421 | E | A | -2.5049 | |
| 422 | R | A | -2.0767 | |
| 423 | F | A | -1.0109 | |
| 424 | S | A | -1.3330 | |
| 425 | Q | A | -1.8134 | |
| 426 | D | A | -2.9735 | |
| 427 | L | A | -2.1598 | |
| 428 | D | A | -3.0233 | |
| 429 | Q | A | -2.7506 | |
| 430 | F | A | -1.6104 | |
| 431 | A | A | -1.1230 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.2304 | |
| 435 | K | A | -1.0660 | |
| 436 | F | A | -0.0843 | |
| 437 | L | A | 0.8037 | |
| 438 | Y | A | 0.6418 | |
| 439 | Q | A | -0.3796 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine