| Chain sequence(s) |
A: GIPCAESCVYIPCLTSAGCSCKSKVCYRN
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4633 | |
| 2 | I | A | 1.1687 | |
| 3 | P | A | 0.3490 | |
| 4 | C | A | 0.4992 | |
| 5 | A | A | 0.2481 | |
| 6 | E | A | 0.3434 | |
| 7 | S | A | 0.3955 | |
| 8 | C | A | 0.7867 | |
| 9 | V | A | 1.1846 | |
| 10 | Y | A | 1.9540 | |
| 11 | I | A | 2.0334 | |
| 12 | P | A | 1.2328 | |
| 13 | C | A | 1.2545 | |
| 14 | L | A | 1.6301 | |
| 15 | T | A | 0.4283 | |
| 16 | S | A | 0.1574 | |
| 17 | A | A | -0.1081 | |
| 18 | G | A | -0.8545 | |
| 19 | C | A | -0.4306 | |
| 20 | S | A | -0.8281 | |
| 21 | C | A | -0.5685 | |
| 22 | K | A | -1.9380 | |
| 23 | S | A | -1.3694 | |
| 24 | K | A | -1.3484 | |
| 25 | V | A | -0.6873 | |
| 26 | C | A | 0.0000 | |
| 27 | Y | A | -0.5031 | |
| 28 | R | A | -1.2099 | |
| 29 | N | A | -1.5512 |