| Chain sequence(s) |
H: QVQLQQSGAELVKPGASVKMSCKASGYTFTSYWMHWVKQRPGQGLEWIGNVYPGSGGTHYNEKFKSKATLTVDKSSSTAYMQLSSLTSEDSAVYYCATLTAPDYWGQGTTLTVSS
L: DIVMTQSPSSLAVSAGEKVTMTCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYFCKQSYNLYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:06:24)
[INFO] Main: Simulation completed successfully. (00:06:27)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6279 | |
| 2 | V | H | 0.0000 | |
| 3 | Q | H | -1.9879 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -2.0000 | |
| 6 | Q | H | -1.3426 | |
| 7 | S | H | -0.9625 | |
| 8 | G | H | -0.6608 | |
| 9 | A | H | 0.1042 | |
| 11 | E | H | 0.3556 | |
| 12 | L | H | 1.1258 | |
| 13 | V | H | -0.0383 | |
| 14 | K | H | -1.6132 | |
| 15 | P | H | -1.3316 | |
| 16 | G | H | -1.0994 | |
| 17 | A | H | -0.8487 | |
| 18 | S | H | -0.8725 | |
| 19 | V | H | -0.5570 | |
| 20 | K | H | -1.1943 | |
| 21 | M | H | 0.0000 | |
| 22 | S | H | -0.6803 | |
| 23 | C | H | 0.0000 | |
| 24 | K | H | -1.5094 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2284 | |
| 27 | G | H | -1.1250 | |
| 28 | Y | H | -0.4737 | |
| 29 | T | H | -0.1245 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -0.3857 | |
| 36 | S | H | 0.0256 | |
| 37 | Y | H | 0.5246 | |
| 38 | W | H | 0.7014 | |
| 39 | M | H | 0.0000 | |
| 40 | H | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | K | H | 0.0000 | |
| 44 | Q | H | -0.8899 | |
| 45 | R | H | -1.3472 | |
| 46 | P | H | -1.0625 | |
| 47 | G | H | -1.3362 | |
| 48 | Q | H | -1.9316 | |
| 49 | G | H | -1.2492 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1362 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | N | H | 0.0000 | |
| 56 | V | H | 0.0000 | |
| 57 | Y | H | 0.2443 | |
| 58 | P | H | 0.0000 | |
| 59 | G | H | -0.4992 | |
| 62 | S | H | -0.4347 | |
| 63 | G | H | -0.6211 | |
| 64 | G | H | -0.5074 | |
| 65 | T | H | -0.5086 | |
| 66 | H | H | -1.2921 | |
| 67 | Y | H | -1.5478 | |
| 68 | N | H | -2.3663 | |
| 69 | E | H | -3.6557 | |
| 70 | K | H | -3.2285 | |
| 71 | F | H | 0.0000 | |
| 72 | K | H | -3.0979 | |
| 74 | S | H | -1.7380 | |
| 75 | K | H | -1.5313 | |
| 76 | A | H | 0.0000 | |
| 77 | T | H | -0.7205 | |
| 78 | L | H | 0.0000 | |
| 79 | T | H | -0.1280 | |
| 80 | V | H | -0.4217 | |
| 81 | D | H | -1.3797 | |
| 82 | K | H | -2.0685 | |
| 83 | S | H | -1.1995 | |
| 84 | S | H | -0.9718 | |
| 85 | S | H | -1.1326 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2360 | |
| 89 | M | H | 0.0000 | |
| 90 | Q | H | -1.0199 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.7102 | |
| 93 | S | H | -0.7815 | |
| 94 | L | H | 0.0000 | |
| 95 | T | H | -0.9812 | |
| 96 | S | H | -0.9647 | |
| 97 | E | H | -1.1943 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.3439 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.0326 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | T | H | 0.0000 | |
| 107 | L | H | 0.4171 | |
| 108 | T | H | 0.1619 | |
| 114 | A | H | 0.0201 | |
| 115 | P | H | 0.0000 | |
| 116 | D | H | -0.5025 | |
| 117 | Y | H | -0.2084 | |
| 118 | W | H | -0.6572 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.8316 | |
| 121 | G | H | -0.9301 | |
| 122 | T | H | 0.0000 | |
| 123 | T | H | -0.0242 | |
| 124 | L | H | 0.0000 | |
| 125 | T | H | 0.1161 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.6060 | |
| 128 | S | H | -0.7257 | |
| 1 | D | L | -1.9609 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.7954 | |
| 4 | M | L | 0.0000 | |
| 5 | T | L | -0.5678 | |
| 6 | Q | L | -0.8290 | |
| 7 | S | L | -0.7132 | |
| 8 | P | L | -0.5189 | |
| 9 | S | L | -0.6175 | |
| 10 | S | L | -0.6530 | |
| 11 | L | L | -0.2413 | |
| 12 | A | L | -0.5837 | |
| 13 | V | L | -0.9157 | |
| 14 | S | L | -1.2918 | |
| 15 | A | L | -1.2326 | |
| 16 | G | L | -1.3830 | |
| 17 | E | L | -2.0684 | |
| 18 | K | L | -2.3208 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.4584 | |
| 21 | M | L | 0.0000 | |
| 22 | T | L | -0.7874 | |
| 23 | C | L | 0.0000 | |
| 24 | K | L | -2.0160 | |
| 25 | S | L | 0.0000 | |
| 26 | S | L | -0.9136 | |
| 27 | Q | L | -1.6198 | |
| 28 | S | L | -0.9926 | |
| 29 | L | L | 0.0000 | |
| 30 | L | L | -0.8699 | |
| 31 | N | L | -1.6220 | |
| 32 | S | L | -2.0689 | |
| 33 | R | L | -2.7231 | |
| 34 | T | L | -2.2072 | |
| 35 | R | L | -2.8623 | |
| 36 | K | L | -1.7780 | |
| 37 | N | L | -0.5980 | |
| 38 | Y | L | 0.0864 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.9261 | |
| 45 | K | L | -1.3416 | |
| 46 | P | L | -0.9049 | |
| 47 | G | L | -1.4368 | |
| 48 | Q | L | -2.0850 | |
| 49 | S | L | -1.3451 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4024 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.0339 | |
| 56 | W | L | -0.0055 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.5434 | |
| 66 | T | L | -0.5769 | |
| 67 | R | L | -1.6414 | |
| 68 | E | L | -1.3519 | |
| 69 | S | L | -0.9733 | |
| 70 | G | L | -1.0821 | |
| 71 | V | L | 0.0000 | |
| 72 | P | L | -1.4410 | |
| 74 | D | L | -2.2431 | |
| 75 | R | L | -1.5320 | |
| 76 | F | L | 0.0000 | |
| 77 | T | L | -0.8777 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.5575 | |
| 80 | G | L | -0.9904 | |
| 83 | S | L | -1.0778 | |
| 84 | G | L | -1.1933 | |
| 85 | T | L | -1.5390 | |
| 86 | D | L | -2.0769 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.6953 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.5279 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.5712 | |
| 93 | S | L | -1.4522 | |
| 94 | V | L | 0.0000 | |
| 95 | Q | L | -1.0775 | |
| 96 | A | L | -1.0777 | |
| 97 | E | L | -1.6900 | |
| 98 | D | L | 0.0000 | |
| 99 | L | L | -0.2450 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.2029 | |
| 102 | Y | L | 0.0000 | |
| 103 | F | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | K | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | 0.3428 | |
| 108 | Y | L | 0.1226 | |
| 114 | N | L | -1.1218 | |
| 115 | L | L | -0.4458 | |
| 116 | Y | L | 0.0942 | |
| 117 | T | L | -0.0276 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.7678 | |
| 121 | G | L | -0.7065 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.8939 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -0.9218 | |
| 126 | I | L | -0.8511 | |
| 127 | K | L | -1.6903 |