Project name: SGHKGHK12

Status: done

Started: 2026-05-21 14:44:20
Settings
Chain sequence(s) A: SGHKGHK
C: SGHKGHK
B: SGHKGHK
E: SGHKGHK
D: SGHKGHK
G: SGHKGHK
F: SGHKGHK
I: SGHKGHK
H: SGHKGHK
K: SGHKGHK
J: SGHKGHK
L: SGHKGHK
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:50)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:52)
Show buried residues

Minimal score value
-4.6279
Maximal score value
-0.9093
Average score
-2.8282
Total score value
-237.57

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.0416
2 G A -1.9878
3 H A -3.2749
4 K A -4.2844
5 G A -3.5523
6 H A -3.8621
7 K A -3.0579
1 S B -2.1181
2 G B -2.9371
3 H B -3.5243
4 K B -4.6279
5 G B -4.0650
6 H B -3.3634
7 K B -2.6168
1 S C -1.9987
2 G C -2.4471
3 H C -2.9315
4 K C -3.5175
5 G C -2.7632
6 H C -2.6697
7 K C -2.6138
1 S D -1.2181
2 G D -2.4257
3 H D -2.8484
4 K D -4.0054
5 G D -2.9173
6 H D -2.7892
7 K D -2.8934
1 S E -1.6261
2 G E -2.5036
3 H E -2.9679
4 K E -3.5379
5 G E -3.1621
6 H E -3.6586
7 K E -3.0430
1 S F -0.9093
2 G F -1.6163
3 H F -2.7588
4 K F -3.8729
5 G F -3.1950
6 H F -3.1733
7 K F -2.7074
1 S G -3.2830
2 G G -2.9149
3 H G -3.0500
4 K G -3.6312
5 G G -3.2798
6 H G -2.8577
7 K G -3.1427
1 S H -1.9093
2 G H -2.3088
3 H H -2.6204
4 K H -3.4577
5 G H -3.2368
6 H H -2.9960
7 K H -3.0006
1 S I -1.4527
2 G I -2.1948
3 H I -2.6316
4 K I -3.2015
5 G I -2.5700
6 H I -2.5096
7 K I -2.5306
1 S J -0.9356
2 G J -1.8466
3 H J -2.4106
4 K J -3.1053
5 G J -2.7364
6 H J -2.5455
7 K J -2.5584
1 S K -0.9992
2 G K -2.2302
3 H K -2.7815
4 K K -3.3035
5 G K -2.4978
6 H K -2.5326
7 K K -2.6879
1 S L -3.7358
2 G L -3.0403
3 H L -3.6423
4 K L -4.1743
5 G L -3.7958
6 H L -3.3166
7 K L -2.8293
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Laboratory of Theory of Biopolymers 2018