| Chain sequence(s) |
A: SGHKGHK
C: SGHKGHK B: SGHKGHK E: SGHKGHK D: SGHKGHK G: SGHKGHK F: SGHKGHK I: SGHKGHK H: SGHKGHK K: SGHKGHK J: SGHKGHK L: SGHKGHK input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:50)
[INFO] Main: Simulation completed successfully. (00:01:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | -1.0416 | |
| 2 | G | A | -1.9878 | |
| 3 | H | A | -3.2749 | |
| 4 | K | A | -4.2844 | |
| 5 | G | A | -3.5523 | |
| 6 | H | A | -3.8621 | |
| 7 | K | A | -3.0579 | |
| 1 | S | B | -2.1181 | |
| 2 | G | B | -2.9371 | |
| 3 | H | B | -3.5243 | |
| 4 | K | B | -4.6279 | |
| 5 | G | B | -4.0650 | |
| 6 | H | B | -3.3634 | |
| 7 | K | B | -2.6168 | |
| 1 | S | C | -1.9987 | |
| 2 | G | C | -2.4471 | |
| 3 | H | C | -2.9315 | |
| 4 | K | C | -3.5175 | |
| 5 | G | C | -2.7632 | |
| 6 | H | C | -2.6697 | |
| 7 | K | C | -2.6138 | |
| 1 | S | D | -1.2181 | |
| 2 | G | D | -2.4257 | |
| 3 | H | D | -2.8484 | |
| 4 | K | D | -4.0054 | |
| 5 | G | D | -2.9173 | |
| 6 | H | D | -2.7892 | |
| 7 | K | D | -2.8934 | |
| 1 | S | E | -1.6261 | |
| 2 | G | E | -2.5036 | |
| 3 | H | E | -2.9679 | |
| 4 | K | E | -3.5379 | |
| 5 | G | E | -3.1621 | |
| 6 | H | E | -3.6586 | |
| 7 | K | E | -3.0430 | |
| 1 | S | F | -0.9093 | |
| 2 | G | F | -1.6163 | |
| 3 | H | F | -2.7588 | |
| 4 | K | F | -3.8729 | |
| 5 | G | F | -3.1950 | |
| 6 | H | F | -3.1733 | |
| 7 | K | F | -2.7074 | |
| 1 | S | G | -3.2830 | |
| 2 | G | G | -2.9149 | |
| 3 | H | G | -3.0500 | |
| 4 | K | G | -3.6312 | |
| 5 | G | G | -3.2798 | |
| 6 | H | G | -2.8577 | |
| 7 | K | G | -3.1427 | |
| 1 | S | H | -1.9093 | |
| 2 | G | H | -2.3088 | |
| 3 | H | H | -2.6204 | |
| 4 | K | H | -3.4577 | |
| 5 | G | H | -3.2368 | |
| 6 | H | H | -2.9960 | |
| 7 | K | H | -3.0006 | |
| 1 | S | I | -1.4527 | |
| 2 | G | I | -2.1948 | |
| 3 | H | I | -2.6316 | |
| 4 | K | I | -3.2015 | |
| 5 | G | I | -2.5700 | |
| 6 | H | I | -2.5096 | |
| 7 | K | I | -2.5306 | |
| 1 | S | J | -0.9356 | |
| 2 | G | J | -1.8466 | |
| 3 | H | J | -2.4106 | |
| 4 | K | J | -3.1053 | |
| 5 | G | J | -2.7364 | |
| 6 | H | J | -2.5455 | |
| 7 | K | J | -2.5584 | |
| 1 | S | K | -0.9992 | |
| 2 | G | K | -2.2302 | |
| 3 | H | K | -2.7815 | |
| 4 | K | K | -3.3035 | |
| 5 | G | K | -2.4978 | |
| 6 | H | K | -2.5326 | |
| 7 | K | K | -2.6879 | |
| 1 | S | L | -3.7358 | |
| 2 | G | L | -3.0403 | |
| 3 | H | L | -3.6423 | |
| 4 | K | L | -4.1743 | |
| 5 | G | L | -3.7958 | |
| 6 | H | L | -3.3166 | |
| 7 | K | L | -2.8293 |