| Chain sequence(s) |
A: LQLREPSFPDVQHSVLIHKVILGSPAHRAGLWPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIRRGRETLTLYVTPEVTE
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 1.1408 | |
| 2 | Q | A | -0.4007 | |
| 3 | L | A | -0.1420 | |
| 4 | R | A | -1.9494 | |
| 5 | E | A | -2.2260 | |
| 6 | P | A | -0.9601 | |
| 7 | S | A | -0.4816 | |
| 8 | F | A | 0.9305 | |
| 9 | P | A | -0.0889 | |
| 10 | D | A | -1.1203 | |
| 11 | V | A | 0.1754 | |
| 12 | Q | A | -1.3137 | |
| 13 | H | A | -0.9861 | |
| 14 | S | A | -0.3536 | |
| 15 | V | A | 0.0406 | |
| 16 | L | A | 0.5542 | |
| 17 | I | A | 0.0000 | |
| 18 | H | A | -1.4780 | |
| 19 | K | A | -1.2904 | |
| 20 | V | A | 0.3188 | |
| 21 | I | A | 2.1737 | |
| 22 | L | A | 1.8889 | |
| 23 | G | A | 0.5735 | |
| 24 | S | A | 0.1508 | |
| 25 | P | A | -0.4447 | |
| 26 | A | A | 0.0211 | |
| 27 | H | A | -0.2994 | |
| 28 | R | A | -1.3860 | |
| 29 | A | A | -0.6121 | |
| 30 | G | A | -0.4119 | |
| 31 | L | A | 0.0000 | |
| 32 | W | A | 0.1758 | |
| 33 | P | A | -0.4449 | |
| 34 | G | A | -0.8921 | |
| 35 | D | A | 0.0000 | |
| 36 | V | A | -0.2155 | |
| 37 | I | A | 0.0000 | |
| 38 | L | A | -0.1707 | |
| 39 | A | A | -0.6278 | |
| 40 | I | A | 0.0000 | |
| 41 | G | A | -1.4116 | |
| 42 | E | A | -2.1852 | |
| 43 | Q | A | -1.4091 | |
| 44 | M | A | -0.2860 | |
| 45 | V | A | 0.0000 | |
| 46 | Q | A | -1.8264 | |
| 47 | N | A | -1.3469 | |
| 48 | A | A | -1.1614 | |
| 49 | E | A | -2.2932 | |
| 50 | D | A | -1.8995 | |
| 51 | V | A | -0.9881 | |
| 52 | Y | A | -0.8286 | |
| 53 | E | A | -2.4590 | |
| 54 | A | A | 0.0000 | |
| 55 | V | A | -1.4429 | |
| 56 | R | A | -2.3450 | |
| 57 | T | A | -1.6145 | |
| 58 | Q | A | -1.9645 | |
| 59 | S | A | -1.4914 | |
| 60 | Q | A | -1.5049 | |
| 61 | L | A | 0.0000 | |
| 62 | A | A | -0.3172 | |
| 63 | V | A | 0.0000 | |
| 64 | Q | A | -0.6599 | |
| 65 | I | A | 0.0000 | |
| 66 | R | A | -2.8742 | |
| 67 | R | A | -2.9516 | |
| 68 | G | A | -2.8245 | |
| 69 | R | A | -3.5455 | |
| 70 | E | A | -3.5811 | |
| 71 | T | A | -2.1990 | |
| 72 | L | A | -0.8948 | |
| 73 | T | A | -0.0898 | |
| 74 | L | A | 0.6425 | |
| 75 | Y | A | 0.8470 | |
| 76 | V | A | 0.0000 | |
| 77 | T | A | -0.7834 | |
| 78 | P | A | 0.0000 | |
| 79 | E | A | -1.6134 | |
| 80 | V | A | -0.1902 | |
| 81 | T | A | -0.8309 | |
| 82 | E | A | -1.5512 |