| Chain sequence(s) |
P: VLTRVRKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAGKKVLGAFSDGLALDNLKGTFATLSELCDKLVDPENFRLLGNVLVCVLAFGKEFTPPVQAAYQKVVAGVANALAKYVLTPVEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPKVKAGKKVLGAFSDGLALDNLKGTFATLSELCDKLVDPENFRLLGNVLVCVLAFGKEFTPPVQAAYQKVVAGVANALAKY
input PDB |
| Selected Chain(s) | P |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with P chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:07)
[INFO] Main: Simulation completed successfully. (00:07:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | P | 0.7920 | |
| 3 | L | P | 0.0140 | |
| 4 | T | P | -0.3166 | |
| 5 | R | P | -1.3538 | |
| 6 | V | P | 0.4004 | |
| 7 | R | P | -0.7351 | |
| 8 | K | P | -0.7082 | |
| 9 | S | P | -0.5160 | |
| 10 | A | P | -0.3120 | |
| 11 | V | P | 0.0000 | |
| 12 | T | P | -0.4202 | |
| 13 | A | P | -0.5992 | |
| 14 | L | P | 0.0000 | |
| 15 | W | P | -0.7327 | |
| 16 | G | P | -1.3256 | |
| 17 | K | P | -1.9115 | |
| 18 | V | P | -1.5199 | |
| 19 | N | P | -2.4752 | |
| 20 | V | P | -2.0633 | |
| 21 | D | P | -3.0520 | |
| 22 | E | P | -3.1222 | |
| 23 | V | P | 0.0000 | |
| 24 | G | P | 0.0000 | |
| 25 | G | P | -2.4473 | |
| 26 | E | P | -1.7758 | |
| 27 | A | P | 0.0000 | |
| 28 | L | P | 0.0000 | |
| 29 | G | P | 0.0000 | |
| 30 | R | P | -0.4771 | |
| 31 | L | P | 0.0000 | |
| 32 | L | P | 0.0000 | |
| 33 | V | P | 0.7176 | |
| 34 | V | P | 1.8091 | |
| 35 | Y | P | 1.2151 | |
| 36 | P | P | 0.4060 | |
| 37 | W | P | 0.5915 | |
| 38 | T | P | 0.0000 | |
| 39 | Q | P | -0.8322 | |
| 40 | R | P | -1.6820 | |
| 41 | F | P | -0.0587 | |
| 42 | F | P | -1.1445 | |
| 43 | E | P | -2.3120 | |
| 44 | S | P | -1.4807 | |
| 45 | F | P | -1.2945 | |
| 46 | G | P | -1.9706 | |
| 47 | D | P | -2.5284 | |
| 48 | L | P | 0.0000 | |
| 49 | S | P | -1.1463 | |
| 50 | T | P | -0.9762 | |
| 51 | P | P | -0.9004 | |
| 52 | D | P | -2.0351 | |
| 53 | A | P | -1.5458 | |
| 54 | V | P | 0.0000 | |
| 55 | M | P | -1.1388 | |
| 56 | G | P | -1.5462 | |
| 57 | N | P | -1.7347 | |
| 58 | P | P | -1.5689 | |
| 59 | K | P | -2.2795 | |
| 60 | V | P | 0.0000 | |
| 61 | K | P | -2.9889 | |
| 62 | A | P | -2.1540 | |
| 64 | G | P | 0.0000 | |
| 65 | K | P | -3.1721 | |
| 66 | K | P | -2.2072 | |
| 67 | V | P | -0.6096 | |
| 68 | L | P | 0.0000 | |
| 69 | G | P | -1.5500 | |
| 70 | A | P | -0.9462 | |
| 71 | F | P | 0.0000 | |
| 72 | S | P | -0.9107 | |
| 73 | D | P | -1.6730 | |
| 74 | G | P | 0.0000 | |
| 75 | L | P | -0.5756 | |
| 76 | A | P | -0.8336 | |
| 78 | L | P | -0.9166 | |
| 79 | D | P | -2.0751 | |
| 80 | N | P | -2.4228 | |
| 81 | L | P | 0.0000 | |
| 82 | K | P | -2.6748 | |
| 83 | G | P | -1.9316 | |
| 84 | T | P | -1.5013 | |
| 85 | F | P | 0.0000 | |
| 86 | A | P | -1.2653 | |
| 87 | T | P | -0.6005 | |
| 88 | L | P | -0.2166 | |
| 89 | S | P | 0.0000 | |
| 90 | E | P | -1.7647 | |
| 91 | L | P | -0.6720 | |
| 93 | C | P | -0.9796 | |
| 94 | D | P | -2.1733 | |
| 95 | K | P | -1.6588 | |
| 96 | L | P | 0.3887 | |
| 98 | V | P | -0.5252 | |
| 99 | D | P | -1.9813 | |
| 100 | P | P | -1.9009 | |
| 101 | E | P | -2.7471 | |
| 102 | N | P | -1.5870 | |
| 103 | F | P | -1.5494 | |
| 104 | R | P | -2.6963 | |
| 105 | L | P | -1.0034 | |
| 106 | L | P | -0.7679 | |
| 107 | G | P | 0.0000 | |
| 108 | N | P | -1.0502 | |
| 109 | V | P | 0.0000 | |
| 110 | L | P | 0.0000 | |
| 111 | V | P | 0.0000 | |
| 112 | C | P | 0.4743 | |
| 113 | V | P | 0.3640 | |
| 114 | L | P | 0.0000 | |
| 115 | A | P | 0.0282 | |
| 118 | F | P | 0.0391 | |
| 119 | G | P | -1.0452 | |
| 120 | K | P | -2.2075 | |
| 121 | E | P | -1.8159 | |
| 122 | F | P | 0.0000 | |
| 123 | T | P | -1.0922 | |
| 124 | P | P | -0.9077 | |
| 125 | P | P | -0.4870 | |
| 126 | V | P | -0.6332 | |
| 127 | Q | P | -1.3052 | |
| 128 | A | P | -1.1041 | |
| 129 | A | P | 0.0000 | |
| 130 | Y | P | 0.0000 | |
| 131 | Q | P | -1.7135 | |
| 132 | K | P | -1.4514 | |
| 133 | V | P | 0.0000 | |
| 134 | V | P | 0.0000 | |
| 135 | A | P | -1.2451 | |
| 136 | G | P | -0.8401 | |
| 137 | V | P | 0.0000 | |
| 138 | A | P | 0.0000 | |
| 139 | N | P | -1.9043 | |
| 140 | A | P | 0.0000 | |
| 141 | L | P | -0.7260 | |
| 142 | A | P | -1.2569 | |
| 144 | K | P | -2.0445 | |
| 145 | Y | P | -0.5485 | |
| 1 | V | P | 1.3880 | |
| 3 | L | P | 0.2984 | |
| 4 | T | P | 0.3065 | |
| 5 | P | P | 0.3595 | |
| 6 | V | P | 1.3361 | |
| 7 | E | P | -0.0001 | |
| 8 | K | P | -0.4580 | |
| 9 | S | P | 0.0955 | |
| 10 | A | P | 0.0727 | |
| 11 | V | P | 0.0000 | |
| 12 | T | P | -0.4933 | |
| 13 | A | P | -0.4566 | |
| 14 | L | P | -0.6487 | |
| 15 | W | P | 0.0000 | |
| 16 | G | P | -1.3440 | |
| 17 | K | P | -1.9520 | |
| 18 | V | P | -1.6529 | |
| 19 | N | P | -2.6245 | |
| 20 | V | P | -2.3509 | |
| 21 | D | P | -3.7464 | |
| 22 | E | P | -3.4786 | |
| 23 | V | P | -2.0183 | |
| 24 | G | P | 0.0000 | |
| 25 | G | P | -2.6860 | |
| 26 | E | P | -2.1901 | |
| 27 | A | P | 0.0000 | |
| 28 | L | P | -0.5834 | |
| 29 | G | P | 0.0000 | |
| 30 | R | P | -0.5264 | |
| 31 | L | P | 0.0000 | |
| 32 | L | P | 0.0000 | |
| 33 | V | P | 0.7477 | |
| 34 | V | P | 1.8704 | |
| 35 | Y | P | 1.3239 | |
| 36 | P | P | 0.3202 | |
| 37 | W | P | 0.3114 | |
| 38 | T | P | 0.0000 | |
| 39 | Q | P | -0.9737 | |
| 40 | R | P | -1.8328 | |
| 41 | F | P | -0.0763 | |
| 42 | F | P | -1.1160 | |
| 43 | E | P | -2.3552 | |
| 44 | S | P | -1.5268 | |
| 45 | F | P | -1.2825 | |
| 46 | G | P | -1.9503 | |
| 47 | D | P | -2.5125 | |
| 48 | L | P | 0.0000 | |
| 49 | S | P | -1.1176 | |
| 50 | T | P | -1.0110 | |
| 51 | P | P | -0.9208 | |
| 52 | D | P | -2.0437 | |
| 53 | A | P | -1.5319 | |
| 54 | V | P | 0.0000 | |
| 55 | M | P | -1.2985 | |
| 56 | G | P | -1.6144 | |
| 57 | N | P | 0.0000 | |
| 58 | P | P | -1.5678 | |
| 59 | K | P | -2.2676 | |
| 60 | V | P | 0.0000 | |
| 61 | K | P | -3.1002 | |
| 62 | A | P | -2.2940 | |
| 64 | G | P | 0.0000 | |
| 65 | K | P | -3.1186 | |
| 66 | K | P | -2.1699 | |
| 67 | V | P | -0.2410 | |
| 68 | L | P | 0.0000 | |
| 69 | G | P | -1.4068 | |
| 70 | A | P | -0.9002 | |
| 71 | F | P | 0.0000 | |
| 72 | S | P | -1.0059 | |
| 73 | D | P | -1.8169 | |
| 74 | G | P | 0.0000 | |
| 75 | L | P | 0.0000 | |
| 76 | A | P | -0.9624 | |
| 78 | L | P | -1.3563 | |
| 79 | D | P | -2.4200 | |
| 80 | N | P | -2.7546 | |
| 81 | L | P | 0.0000 | |
| 82 | K | P | -2.8279 | |
| 83 | G | P | -1.8511 | |
| 84 | T | P | -1.4888 | |
| 85 | F | P | 0.0000 | |
| 86 | A | P | -0.9696 | |
| 87 | T | P | -0.5141 | |
| 88 | L | P | 0.0773 | |
| 89 | S | P | 0.0000 | |
| 90 | E | P | -1.4776 | |
| 91 | L | P | -0.3059 | |
| 93 | C | P | -0.7667 | |
| 94 | D | P | -2.0327 | |
| 95 | K | P | -1.5614 | |
| 96 | L | P | 0.4743 | |
| 98 | V | P | -0.3448 | |
| 99 | D | P | -1.6298 | |
| 100 | P | P | -1.3864 | |
| 101 | E | P | -2.3153 | |
| 102 | N | P | 0.0000 | |
| 103 | F | P | -0.9190 | |
| 104 | R | P | -1.5792 | |
| 105 | L | P | -0.4474 | |
| 106 | L | P | -0.4026 | |
| 107 | G | P | 0.0000 | |
| 108 | N | P | -0.9658 | |
| 109 | V | P | 0.0000 | |
| 110 | L | P | 0.0000 | |
| 111 | V | P | 0.0000 | |
| 112 | C | P | 0.5053 | |
| 113 | V | P | 0.2056 | |
| 114 | L | P | 0.0000 | |
| 115 | A | P | -0.2273 | |
| 118 | F | P | -0.6040 | |
| 119 | G | P | -1.5046 | |
| 120 | K | P | -2.6614 | |
| 121 | E | P | -2.6178 | |
| 122 | F | P | 0.0000 | |
| 123 | T | P | -1.3473 | |
| 124 | P | P | -0.9718 | |
| 125 | P | P | -0.3945 | |
| 126 | V | P | -0.5754 | |
| 127 | Q | P | -1.2275 | |
| 128 | A | P | -0.9194 | |
| 129 | A | P | 0.0000 | |
| 130 | Y | P | 0.0000 | |
| 131 | Q | P | -1.5762 | |
| 132 | K | P | -1.0178 | |
| 133 | V | P | 0.0000 | |
| 134 | V | P | 0.0000 | |
| 135 | A | P | -0.5605 | |
| 136 | G | P | 0.0000 | |
| 137 | V | P | 0.0000 | |
| 138 | A | P | 0.0000 | |
| 139 | N | P | -0.8846 | |
| 140 | A | P | 0.0000 | |
| 141 | L | P | -0.4318 | |
| 142 | A | P | -0.8876 | |
| 144 | K | P | -1.7360 | |
| 145 | Y | P | -0.1834 |