Project name: CM142-148 (1)

Status: done

Started: 2026-03-02 06:40:01
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Chain sequence(s) A: GVSHWM
C: GVSHWM
B: GVSHWM
E: GVSHWM
D: GVSHWM
G: GVSHWM
F: GVSHWM
I: GVSHWM
H: GVSHWM
J: GVSHWM
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,J
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:18)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:21)
Show buried residues

Minimal score value
-0.9409
Maximal score value
2.0668
Average score
0.6122
Total score value
36.7317

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
2 G C -0.7742
3 V C 0.0000
4 S C -0.0222
5 H C 0.0000
6 W C 1.7009
7 M C 2.0578
2 G A -0.4877
3 V A -0.0001
4 S A 0.0152
5 H A 0.7605
6 W A 1.8630
7 M A 2.0155
2 G B -0.6512
3 V B -0.3277
4 S B -0.0794
5 H B 0.8408
6 W B 1.9172
7 M B 2.0573
2 G E -0.9366
3 V E 0.0000
4 S E -0.1281
5 H E 0.0000
6 W E 1.7411
7 M E 1.9994
2 G D -0.8659
3 V D 0.0000
4 S D -0.0840
5 H D 0.0000
6 W D 1.8048
7 M D 2.0465
2 G F -0.9409
3 V F 0.0000
4 S F -0.1777
5 H F 0.0000
6 W F 1.6656
7 M F 2.0668
2 G G -0.7308
3 V G 0.0000
4 S G 0.0772
5 H G 0.0000
6 W G 1.7622
7 M G 1.9641
2 G I -0.4249
3 V I 0.1121
4 S I 0.1524
5 H I 0.9486
6 W I 1.6105
7 M I 1.8469
2 G H -0.4147
3 V H 0.0000
4 S H 0.3646
5 H H 0.0000
6 W H 1.6292
7 M H 1.8690
2 G J 0.1416
3 V J 1.2688
4 S J 0.7249
5 H J 1.0318
6 W J 1.7957
7 M J 1.9258
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Laboratory of Theory of Biopolymers 2018