| Chain sequence(s) |
A: ALLLLDDADAALAAAALAALAAAGAALLAAAAADAAALAAALAAGADLLLLDLADLDALLAALAALAAAGAALLAAAAGDLALLLAALAAGADLLLLDAGDLAAALAALAALAAAGAALLALAAGDLAALLAALAAGADLLLLDAGDLADALAAAAALAAAGAALLALAAGDLDALLAGLAAGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | 0.2493 | |
| 2 | L | A | 0.0000 | |
| 3 | L | A | 0.0000 | |
| 4 | L | A | 0.0000 | |
| 5 | L | A | 0.0000 | |
| 6 | D | A | -3.1019 | |
| 7 | D | A | -2.8222 | |
| 8 | A | A | -1.7632 | |
| 9 | D | A | -1.8805 | |
| 10 | A | A | -0.6610 | |
| 11 | A | A | -0.2317 | |
| 12 | L | A | -0.0426 | |
| 13 | A | A | 0.0000 | |
| 14 | A | A | 0.0832 | |
| 15 | A | A | 0.3243 | |
| 16 | A | A | 0.0000 | |
| 17 | L | A | 0.0000 | |
| 18 | A | A | 0.0980 | |
| 19 | A | A | 0.1243 | |
| 20 | L | A | 0.0000 | |
| 21 | A | A | -0.0026 | |
| 22 | A | A | -0.0172 | |
| 23 | A | A | -0.0388 | |
| 24 | G | A | -0.3138 | |
| 25 | A | A | 0.0378 | |
| 26 | A | A | 0.0447 | |
| 27 | L | A | 0.1232 | |
| 28 | L | A | 0.0000 | |
| 29 | A | A | 0.0000 | |
| 30 | A | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | A | A | -1.6418 | |
| 33 | A | A | -1.3730 | |
| 34 | D | A | -1.2521 | |
| 35 | A | A | -0.5863 | |
| 36 | A | A | -0.2072 | |
| 37 | A | A | -0.5841 | |
| 38 | L | A | 0.0000 | |
| 39 | A | A | -0.0187 | |
| 40 | A | A | 0.1457 | |
| 41 | A | A | 0.0000 | |
| 42 | L | A | -0.0481 | |
| 43 | A | A | -0.0367 | |
| 44 | A | A | -0.0916 | |
| 45 | G | A | -0.4135 | |
| 46 | A | A | 0.0000 | |
| 47 | D | A | -0.7153 | |
| 48 | L | A | 0.0000 | |
| 49 | L | A | 0.0000 | |
| 50 | L | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | D | A | -2.4895 | |
| 53 | L | A | -1.4076 | |
| 54 | A | A | -1.4161 | |
| 55 | D | A | -1.9984 | |
| 56 | L | A | -0.7313 | |
| 57 | D | A | -1.7075 | |
| 58 | A | A | -1.1038 | |
| 59 | L | A | 0.0000 | |
| 60 | L | A | -0.0566 | |
| 61 | A | A | -0.0011 | |
| 62 | A | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | A | A | 0.2291 | |
| 65 | A | A | 0.1716 | |
| 66 | L | A | 0.0000 | |
| 67 | A | A | -0.0073 | |
| 68 | A | A | -0.0051 | |
| 69 | A | A | -0.0402 | |
| 70 | G | A | -0.2734 | |
| 71 | A | A | -0.1142 | |
| 72 | A | A | -0.1216 | |
| 73 | L | A | -0.1061 | |
| 74 | L | A | 0.0000 | |
| 75 | A | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | A | A | 0.0000 | |
| 78 | A | A | 0.0000 | |
| 79 | G | A | -2.0908 | |
| 80 | D | A | -1.4327 | |
| 81 | L | A | -0.1975 | |
| 82 | A | A | 0.2278 | |
| 83 | L | A | -0.0853 | |
| 84 | L | A | 0.0000 | |
| 85 | L | A | 0.6698 | |
| 86 | A | A | 0.5453 | |
| 87 | A | A | 0.0000 | |
| 88 | L | A | 0.1558 | |
| 89 | A | A | 0.1577 | |
| 90 | A | A | 0.0565 | |
| 91 | G | A | -0.3706 | |
| 92 | A | A | 0.0000 | |
| 93 | D | A | -0.6098 | |
| 94 | L | A | 0.0000 | |
| 95 | L | A | 0.0000 | |
| 96 | L | A | 0.0000 | |
| 97 | L | A | 0.0000 | |
| 98 | D | A | -2.8274 | |
| 99 | A | A | -1.8617 | |
| 100 | G | A | -1.7799 | |
| 101 | D | A | -1.9781 | |
| 102 | L | A | -0.6935 | |
| 103 | A | A | -0.1097 | |
| 104 | A | A | -0.3715 | |
| 105 | A | A | 0.0000 | |
| 106 | L | A | 0.3794 | |
| 107 | A | A | 0.4582 | |
| 108 | A | A | 0.0000 | |
| 109 | L | A | 0.0000 | |
| 110 | A | A | 0.1278 | |
| 111 | A | A | 0.2621 | |
| 112 | L | A | 0.0000 | |
| 113 | A | A | 0.0016 | |
| 114 | A | A | -0.0172 | |
| 115 | A | A | 0.0453 | |
| 116 | G | A | -0.1989 | |
| 117 | A | A | -0.0413 | |
| 118 | A | A | -0.0766 | |
| 119 | L | A | -0.0106 | |
| 120 | L | A | 0.0000 | |
| 121 | A | A | 0.0000 | |
| 122 | L | A | 0.0000 | |
| 123 | A | A | 0.0000 | |
| 124 | A | A | 0.0000 | |
| 125 | G | A | -2.3687 | |
| 126 | D | A | -1.8331 | |
| 127 | L | A | -0.6600 | |
| 128 | A | A | -0.0142 | |
| 129 | A | A | 0.0000 | |
| 130 | L | A | 0.0000 | |
| 131 | L | A | 0.5582 | |
| 132 | A | A | 0.5941 | |
| 133 | A | A | 0.0000 | |
| 134 | L | A | 0.1447 | |
| 135 | A | A | 0.1159 | |
| 136 | A | A | 0.0204 | |
| 137 | G | A | -0.3980 | |
| 138 | A | A | 0.0000 | |
| 139 | D | A | -0.7983 | |
| 140 | L | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | L | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | D | A | -2.9177 | |
| 145 | A | A | -2.4186 | |
| 146 | G | A | -2.4225 | |
| 147 | D | A | -2.9279 | |
| 148 | L | A | -1.7263 | |
| 149 | A | A | -1.0889 | |
| 150 | D | A | -2.3135 | |
| 151 | A | A | 0.0000 | |
| 152 | L | A | -0.0977 | |
| 153 | A | A | -0.1282 | |
| 154 | A | A | 0.0000 | |
| 155 | A | A | 0.1612 | |
| 156 | A | A | 0.0659 | |
| 157 | A | A | 0.2928 | |
| 158 | L | A | 0.0000 | |
| 159 | A | A | 0.0380 | |
| 160 | A | A | -0.0132 | |
| 161 | A | A | 0.0497 | |
| 162 | G | A | -0.2301 | |
| 163 | A | A | -0.0983 | |
| 164 | A | A | -0.0530 | |
| 165 | L | A | 0.1647 | |
| 166 | L | A | 0.0000 | |
| 167 | A | A | 0.0000 | |
| 168 | L | A | 0.0000 | |
| 169 | A | A | -1.8097 | |
| 170 | A | A | -2.2652 | |
| 171 | G | A | -2.6996 | |
| 172 | D | A | -3.0666 | |
| 173 | L | A | -1.7806 | |
| 174 | D | A | -2.1369 | |
| 175 | A | A | -1.4489 | |
| 176 | L | A | 0.0000 | |
| 177 | L | A | -0.3506 | |
| 178 | A | A | -0.2361 | |
| 179 | G | A | -0.0105 | |
| 180 | L | A | 0.1463 | |
| 181 | A | A | 0.0683 | |
| 182 | A | A | -0.1250 | |
| 183 | G | A | -0.4003 | |
| 184 | G | A | -0.5421 |