| Chain sequence(s) |
A: MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGSMVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPNMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGQFVKVSAEREPANIDWATDGVEIVLEATGFFASKEKAEQHIHENGAKKVVITAPGGNDVKTVVFNTNHDILDGTETVISGALEHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.7800 | |
| 2 | G | A | -0.2041 | |
| 3 | S | A | -0.6848 | |
| 4 | S | A | -1.1532 | |
| 5 | H | A | -1.9390 | |
| 6 | H | A | -2.2897 | |
| 7 | H | A | -2.4602 | |
| 8 | H | A | -2.4201 | |
| 9 | H | A | -2.2715 | |
| 10 | H | A | -1.9105 | |
| 11 | S | A | -1.1668 | |
| 12 | S | A | -0.4322 | |
| 13 | G | A | 0.3998 | |
| 14 | L | A | 1.8487 | |
| 15 | V | A | 1.7950 | |
| 16 | P | A | -0.0808 | |
| 17 | R | A | -1.6429 | |
| 18 | G | A | -1.5771 | |
| 19 | S | A | -1.1477 | |
| 20 | H | A | -0.6527 | |
| 21 | M | A | 0.4836 | |
| 22 | A | A | 0.5134 | |
| 23 | S | A | 0.5354 | |
| 24 | M | A | 0.7475 | |
| 25 | T | A | -0.1153 | |
| 26 | G | A | -1.0649 | |
| 27 | G | A | -1.4059 | |
| 28 | Q | A | -1.9082 | |
| 29 | Q | A | -1.9562 | |
| 30 | M | A | -0.7997 | |
| 31 | G | A | -1.5897 | |
| 32 | R | A | -2.0596 | |
| 33 | G | A | -1.0089 | |
| 34 | S | A | -0.5653 | |
| 35 | M | A | 0.9637 | |
| 36 | V | A | 1.0728 | |
| 37 | V | A | 0.6959 | |
| 38 | K | A | -0.1488 | |
| 39 | V | A | 0.0000 | |
| 40 | G | A | 0.0000 | |
| 41 | I | A | 0.0000 | |
| 42 | N | A | 0.0000 | |
| 43 | G | A | 0.0000 | |
| 44 | F | A | 0.0000 | |
| 45 | G | A | -0.8272 | |
| 46 | R | A | -1.3693 | |
| 47 | I | A | 0.1183 | |
| 48 | G | A | 0.0000 | |
| 49 | R | A | -0.6019 | |
| 50 | L | A | -0.2579 | |
| 51 | A | A | -0.3666 | |
| 52 | F | A | 0.0000 | |
| 53 | R | A | -1.4371 | |
| 54 | R | A | -1.9715 | |
| 55 | I | A | -1.2539 | |
| 56 | Q | A | -1.9266 | |
| 57 | N | A | -1.9804 | |
| 58 | V | A | -1.0957 | |
| 59 | E | A | -1.5701 | |
| 60 | G | A | -0.1872 | |
| 61 | V | A | 0.1672 | |
| 62 | E | A | -0.4850 | |
| 63 | V | A | 0.0000 | |
| 64 | T | A | -0.2906 | |
| 65 | R | A | 0.0000 | |
| 66 | I | A | 0.0000 | |
| 67 | N | A | 0.0000 | |
| 68 | D | A | -0.3031 | |
| 69 | L | A | 0.3495 | |
| 70 | T | A | -0.2622 | |
| 71 | D | A | -1.4824 | |
| 72 | P | A | -1.5104 | |
| 73 | N | A | -1.8903 | |
| 74 | M | A | -0.5730 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | H | A | -0.5992 | |
| 78 | L | A | -0.2241 | |
| 79 | L | A | 0.0000 | |
| 80 | K | A | -1.2605 | |
| 81 | Y | A | -0.1621 | |
| 82 | D | A | -0.9545 | |
| 83 | T | A | -0.6193 | |
| 84 | T | A | -1.0867 | |
| 85 | Q | A | -1.6157 | |
| 86 | G | A | -1.8165 | |
| 87 | R | A | -2.4650 | |
| 88 | F | A | 0.0000 | |
| 89 | D | A | -2.7201 | |
| 90 | G | A | -1.9344 | |
| 91 | T | A | -1.7069 | |
| 92 | V | A | 0.0000 | |
| 93 | E | A | -2.0229 | |
| 94 | V | A | -1.2276 | |
| 95 | K | A | -2.3352 | |
| 96 | E | A | -2.7113 | |
| 97 | G | A | -1.6959 | |
| 98 | G | A | 0.0000 | |
| 99 | F | A | 0.0000 | |
| 100 | E | A | -1.5673 | |
| 101 | V | A | 0.0000 | |
| 102 | N | A | -2.1316 | |
| 103 | G | A | -1.5835 | |
| 104 | Q | A | -1.3863 | |
| 105 | F | A | -0.1020 | |
| 106 | V | A | 0.0000 | |
| 107 | K | A | -1.1160 | |
| 108 | V | A | 0.0000 | |
| 109 | S | A | -0.7142 | |
| 110 | A | A | -0.6696 | |
| 111 | E | A | -2.0001 | |
| 112 | R | A | -2.8700 | |
| 113 | E | A | -3.2035 | |
| 114 | P | A | 0.0000 | |
| 115 | A | A | -2.2484 | |
| 116 | N | A | -2.6532 | |
| 117 | I | A | 0.0000 | |
| 118 | D | A | -1.8674 | |
| 119 | W | A | 0.0000 | |
| 120 | A | A | -1.5266 | |
| 121 | T | A | -0.6915 | |
| 122 | D | A | -0.8211 | |
| 123 | G | A | -0.7137 | |
| 124 | V | A | 0.0000 | |
| 125 | E | A | -1.2762 | |
| 126 | I | A | -0.5569 | |
| 127 | V | A | 0.0000 | |
| 128 | L | A | 0.3662 | |
| 129 | E | A | 0.0000 | |
| 130 | A | A | 0.2091 | |
| 131 | T | A | 0.3750 | |
| 132 | G | A | 0.6060 | |
| 133 | F | A | 1.7058 | |
| 134 | F | A | 0.0112 | |
| 135 | A | A | -0.2553 | |
| 136 | S | A | -1.7158 | |
| 137 | K | A | -2.7991 | |
| 138 | E | A | -3.1882 | |
| 139 | K | A | -2.2517 | |
| 140 | A | A | 0.0000 | |
| 141 | E | A | -2.2018 | |
| 142 | Q | A | -1.8486 | |
| 143 | H | A | 0.0000 | |
| 144 | I | A | -1.3238 | |
| 145 | H | A | -2.0014 | |
| 146 | E | A | -2.7107 | |
| 147 | N | A | -2.7170 | |
| 148 | G | A | -2.2282 | |
| 149 | A | A | 0.0000 | |
| 150 | K | A | -2.5334 | |
| 151 | K | A | -1.5887 | |
| 152 | V | A | 0.0000 | |
| 153 | V | A | 0.2664 | |
| 154 | I | A | 0.0000 | |
| 155 | T | A | 0.3837 | |
| 156 | A | A | 0.2909 | |
| 157 | P | A | -0.7142 | |
| 158 | G | A | 0.0000 | |
| 159 | G | A | -1.9375 | |
| 160 | N | A | -2.6508 | |
| 161 | D | A | -3.0789 | |
| 162 | V | A | 0.0000 | |
| 163 | K | A | -1.2940 | |
| 164 | T | A | -0.4767 | |
| 165 | V | A | 0.0000 | |
| 166 | V | A | 0.3201 | |
| 167 | F | A | 0.9536 | |
| 168 | N | A | -0.9830 | |
| 169 | T | A | -0.6934 | |
| 170 | N | A | -0.6860 | |
| 171 | H | A | -0.8517 | |
| 172 | D | A | -1.5906 | |
| 173 | I | A | -0.3510 | |
| 174 | L | A | -0.7878 | |
| 175 | D | A | -1.8935 | |
| 176 | G | A | -1.1569 | |
| 177 | T | A | -0.9438 | |
| 178 | E | A | -0.8683 | |
| 179 | T | A | -0.8855 | |
| 180 | V | A | 0.0000 | |
| 181 | I | A | -0.3623 | |
| 182 | S | A | 0.0000 | |
| 183 | G | A | 0.4195 | |
| 184 | A | A | 0.5590 | |
| 185 | L | A | 0.6325 | |
| 186 | E | A | -1.7890 | |
| 187 | H | A | -2.3663 | |
| 188 | H | A | -2.7222 | |
| 189 | H | A | -2.9666 | |
| 190 | H | A | -2.6921 | |
| 191 | H | A | -2.4022 | |
| 192 | H | A | -1.8989 |