| Chain sequence(s) |
A: PRNRIRKPKKKIPKVTELEPYVDEKAKEYEENKEEFEKLLEENEKLEEQEKEEEREEAEREAAAELAARA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:15)
[INFO] Main: Simulation completed successfully. (00:02:16)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -1.4944 | |
| 2 | R | A | -2.5395 | |
| 3 | N | A | -2.7522 | |
| 4 | R | A | -2.5626 | |
| 5 | I | A | -1.0802 | |
| 6 | R | A | -2.6261 | |
| 7 | K | A | -3.0734 | |
| 8 | P | A | -2.7346 | |
| 9 | K | A | -3.4794 | |
| 10 | K | A | -3.1432 | |
| 11 | K | A | -2.2997 | |
| 12 | I | A | 0.2426 | |
| 13 | P | A | -0.2453 | |
| 14 | K | A | -0.8219 | |
| 15 | V | A | 0.9234 | |
| 16 | T | A | -0.4122 | |
| 17 | E | A | -1.6098 | |
| 18 | L | A | -0.0994 | |
| 19 | E | A | -1.3343 | |
| 20 | P | A | -0.0310 | |
| 21 | Y | A | 1.0260 | |
| 22 | V | A | -0.1368 | |
| 23 | D | A | -2.3822 | |
| 24 | E | A | -3.8954 | |
| 25 | K | A | -3.9742 | |
| 26 | A | A | -3.5209 | |
| 27 | K | A | -4.6571 | |
| 28 | E | A | -4.8465 | |
| 29 | Y | A | -4.0770 | |
| 30 | E | A | -4.7784 | |
| 31 | E | A | -4.4200 | |
| 32 | N | A | -4.0058 | |
| 33 | K | A | -4.4024 | |
| 34 | E | A | -4.2448 | |
| 35 | E | A | -3.8922 | |
| 36 | F | A | -2.9330 | |
| 37 | E | A | -3.6491 | |
| 38 | K | A | -3.9530 | |
| 39 | L | A | -2.3836 | |
| 40 | L | A | -2.0729 | |
| 41 | E | A | -3.8295 | |
| 42 | E | A | -3.7914 | |
| 43 | N | A | -3.9676 | |
| 44 | E | A | -4.9305 | |
| 45 | K | A | -4.6909 | |
| 46 | L | A | -3.7259 | |
| 47 | E | A | -5.7752 | |
| 48 | E | A | -6.2593 | |
| 49 | Q | A | -6.0158 | |
| 50 | E | A | -6.5887 | |
| 51 | K | A | -6.8636 | |
| 52 | E | A | -6.9672 | |
| 53 | E | A | -7.2890 | |
| 54 | E | A | -7.0570 | |
| 55 | R | A | -6.9322 | |
| 56 | E | A | -6.6217 | |
| 57 | E | A | -6.0288 | |
| 58 | A | A | -5.0091 | |
| 59 | E | A | -5.3409 | |
| 60 | R | A | -5.1345 | |
| 61 | E | A | -4.4058 | |
| 62 | A | A | -2.6465 | |
| 63 | A | A | -2.0479 | |
| 64 | A | A | -1.9288 | |
| 65 | E | A | -2.4296 | |
| 66 | L | A | -0.3550 | |
| 67 | A | A | -0.5085 | |
| 68 | A | A | -0.9294 | |
| 69 | R | A | -1.6938 | |
| 70 | A | A | -0.6536 |