| Chain sequence(s) |
A: GCEGKQCGLFRSCGGGCRCWPTVTPGVGICSSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:08)
[INFO] Main: Simulation completed successfully. (00:00:09)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.0662 | |
| 2 | C | A | -1.5091 | |
| 3 | E | A | -2.0199 | |
| 4 | G | A | -1.4259 | |
| 5 | K | A | -1.5514 | |
| 6 | Q | A | -0.4971 | |
| 7 | C | A | 0.0000 | |
| 8 | G | A | 0.7539 | |
| 9 | L | A | 1.6642 | |
| 10 | F | A | 1.4228 | |
| 11 | R | A | -0.6827 | |
| 12 | S | A | -0.9376 | |
| 13 | C | A | -1.3189 | |
| 14 | G | A | -1.4113 | |
| 15 | G | A | -1.1311 | |
| 16 | G | A | -1.3444 | |
| 17 | C | A | -1.3712 | |
| 18 | R | A | -1.4208 | |
| 19 | C | A | -0.0038 | |
| 20 | W | A | 1.1713 | |
| 21 | P | A | 0.7536 | |
| 22 | T | A | 1.1577 | |
| 23 | V | A | 1.6031 | |
| 24 | T | A | 0.5765 | |
| 25 | P | A | -0.0827 | |
| 26 | G | A | 0.4290 | |
| 27 | V | A | 0.8953 | |
| 28 | G | A | 0.0000 | |
| 29 | I | A | 0.1871 | |
| 30 | C | A | 0.0000 | |
| 31 | S | A | -1.1980 | |
| 32 | S | A | -1.4607 | |
| 33 | S | A | -1.3039 |