| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVNGKVLVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEYVHDTEDVRVDFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFVRAGPVGHPLPDAPPPSPLYVKPPPGSPYWVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPLPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.8989 | |
| 2 | L | A | 1.8309 | |
| 3 | P | A | 0.5737 | |
| 4 | P | A | 0.1610 | |
| 5 | T | A | 0.0048 | |
| 6 | T | A | -0.0120 | |
| 7 | P | A | 0.2727 | |
| 8 | V | A | 1.2040 | |
| 9 | A | A | -0.0394 | |
| 10 | K | A | -1.1504 | |
| 11 | V | A | -0.4256 | |
| 12 | Q | A | -1.5487 | |
| 13 | S | A | -1.6133 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4333 | |
| 16 | E | A | -2.4474 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4594 | |
| 20 | P | A | 0.1269 | |
| 21 | T | A | 0.1646 | |
| 22 | S | A | -0.0992 | |
| 23 | L | A | 0.0912 | |
| 24 | F | A | -0.0461 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1418 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.6685 | |
| 31 | R | A | -2.5737 | |
| 32 | L | A | -0.7273 | |
| 33 | L | A | 1.1887 | |
| 34 | T | A | 1.3667 | |
| 35 | V | A | 1.8132 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2711 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6250 | |
| 40 | K | A | -1.8727 | |
| 41 | D | A | -0.7570 | |
| 42 | I | A | 1.2273 | |
| 43 | V | A | 2.1921 | |
| 44 | V | A | 1.6850 | |
| 45 | N | A | -0.5056 | |
| 46 | G | A | -0.3481 | |
| 47 | K | A | -0.1203 | |
| 48 | V | A | 2.2028 | |
| 49 | L | A | 2.5311 | |
| 50 | V | A | 1.4531 | |
| 51 | P | A | 0.3334 | |
| 52 | K | A | -0.6946 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1019 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4709 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2690 | |
| 70 | K | A | -1.8103 | |
| 71 | F | A | -0.6630 | |
| 72 | A | A | -0.5753 | |
| 73 | L | A | -0.8465 | |
| 74 | P | A | -1.2451 | |
| 75 | Q | A | -2.4837 | |
| 76 | K | A | -3.0996 | |
| 77 | D | A | -2.9914 | |
| 78 | F | A | -1.6414 | |
| 79 | Y | A | -1.9348 | |
| 80 | D | A | -2.7896 | |
| 81 | P | A | -2.3604 | |
| 82 | E | A | -3.0844 | |
| 83 | K | A | -3.4529 | |
| 84 | E | A | -2.5190 | |
| 85 | R | A | -1.3304 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6818 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9626 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3697 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6834 | |
| 99 | G | A | -0.5440 | |
| 100 | P | A | -0.4063 | |
| 101 | L | A | 0.0466 | |
| 102 | G | A | -0.2017 | |
| 103 | K | A | -0.6153 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4381 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1819 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.3784 | |
| 110 | L | A | -0.0840 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1983 | |
| 113 | K | A | -0.7608 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | -0.7829 | |
| 116 | D | A | -1.4664 | |
| 117 | T | A | -0.9982 | |
| 118 | E | A | -1.9399 | |
| 119 | N | A | -2.2811 | |
| 120 | P | A | -1.7764 | |
| 121 | T | A | -1.4178 | |
| 122 | E | A | -1.7204 | |
| 123 | Y | A | 0.3348 | |
| 124 | V | A | 0.1217 | |
| 125 | H | A | -0.3410 | |
| 126 | D | A | -1.9942 | |
| 127 | T | A | -1.7388 | |
| 128 | E | A | -3.1036 | |
| 129 | D | A | -2.8132 | |
| 130 | V | A | -1.5182 | |
| 131 | R | A | -1.3333 | |
| 132 | V | A | -0.4679 | |
| 133 | D | A | -1.3701 | |
| 134 | F | A | -0.5865 | |
| 135 | S | A | -0.4615 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6765 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5642 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2199 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1078 | |
| 157 | D | A | 0.2563 | |
| 158 | L | A | 0.7482 | |
| 159 | A | A | 0.1549 | |
| 160 | E | A | -1.4578 | |
| 161 | P | A | -0.2438 | |
| 162 | C | A | 0.1585 | |
| 163 | P | A | -0.1979 | |
| 164 | G | A | -0.1177 | |
| 165 | L | A | 0.4987 | |
| 166 | P | A | -0.1547 | |
| 167 | P | A | -0.3615 | |
| 168 | G | A | -0.4294 | |
| 169 | A | A | -0.0411 | |
| 170 | C | A | 0.6553 | |
| 171 | P | A | 0.4982 | |
| 172 | P | A | 0.7654 | |
| 173 | I | A | 1.9648 | |
| 174 | Q | A | 0.8332 | |
| 175 | L | A | 1.4856 | |
| 176 | V | A | 0.8459 | |
| 177 | N | A | -0.2919 | |
| 178 | S | A | 0.0526 | |
| 179 | V | A | 0.4599 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3911 | |
| 182 | D | A | 0.0959 | |
| 183 | G | A | -0.1563 | |
| 184 | D | A | -0.5843 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4727 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1125 | |
| 190 | F | A | 0.0262 | |
| 191 | G | A | -0.1458 | |
| 192 | N | A | -0.3383 | |
| 193 | M | A | -0.2042 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4794 | |
| 197 | E | A | -2.7390 | |
| 198 | L | A | -1.3010 | |
| 199 | Q | A | -2.5764 | |
| 200 | Q | A | -3.3686 | |
| 201 | D | A | -3.6135 | |
| 202 | R | A | -3.3411 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2089 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3911 | |
| 211 | S | A | -1.9244 | |
| 212 | T | A | -1.5084 | |
| 213 | R | A | -2.2588 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.2211 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3298 | |
| 220 | L | A | 0.5504 | |
| 221 | K | A | -1.1971 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9282 | |
| 224 | N | A | -1.5362 | |
| 225 | E | A | -1.2916 | |
| 226 | A | A | -0.6718 | |
| 227 | Y | A | -0.4510 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6921 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1330 | |
| 234 | F | A | -0.0026 | |
| 235 | G | A | -0.8981 | |
| 236 | R | A | -2.6182 | |
| 237 | R | A | -2.8109 | |
| 238 | E | A | -2.0344 | |
| 239 | Q | A | -0.0652 | |
| 240 | V | A | 1.5794 | |
| 241 | Y | A | 1.2644 | |
| 242 | A | A | 0.1669 | |
| 243 | R | A | -1.2666 | |
| 244 | H | A | -1.0560 | |
| 245 | F | A | -0.0047 | |
| 246 | F | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.5908 | |
| 249 | A | A | -1.1908 | |
| 250 | G | A | -1.1550 | |
| 251 | P | A | -0.7435 | |
| 252 | V | A | -0.5232 | |
| 253 | G | A | -0.8967 | |
| 254 | H | A | -1.1324 | |
| 255 | P | A | -0.7200 | |
| 256 | L | A | 0.0437 | |
| 257 | P | A | -0.8392 | |
| 258 | D | A | -1.7128 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.9043 | |
| 261 | P | A | -0.6023 | |
| 262 | P | A | -0.1241 | |
| 263 | S | A | 0.0388 | |
| 264 | P | A | 0.6656 | |
| 265 | L | A | 1.6007 | |
| 266 | Y | A | 1.2351 | |
| 267 | V | A | 1.1914 | |
| 268 | K | A | -0.0371 | |
| 269 | P | A | 0.4109 | |
| 270 | P | A | -0.2985 | |
| 271 | P | A | -0.3090 | |
| 272 | G | A | -0.1603 | |
| 273 | S | A | 0.4039 | |
| 274 | P | A | 1.0074 | |
| 275 | Y | A | 2.0293 | |
| 276 | W | A | 1.6499 | |
| 277 | V | A | 2.5096 | |
| 278 | L | A | 2.0214 | |
| 279 | P | A | 0.8811 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.2580 | |
| 282 | D | A | -0.3634 | |
| 283 | Y | A | 1.0656 | |
| 284 | F | A | 0.8017 | |
| 285 | G | A | 0.2170 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9594 | |
| 291 | L | A | 1.6579 | |
| 292 | V | A | 0.6818 | |
| 293 | S | A | -0.1392 | |
| 294 | S | A | -0.9592 | |
| 295 | D | A | -1.8361 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0944 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6411 | |
| 301 | R | A | -1.8560 | |
| 302 | P | A | -0.9505 | |
| 303 | F | A | -0.2362 | |
| 304 | W | A | -0.5347 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0919 | |
| 307 | R | A | -2.9290 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6532 | |
| 310 | G | A | -1.4154 | |
| 311 | N | A | -1.4015 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9372 | |
| 319 | N | A | -0.9976 | |
| 320 | E | A | -1.0497 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3316 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0933 | |
| 333 | N | A | 0.5149 | |
| 334 | F | A | 1.6849 | |
| 335 | T | A | 0.8599 | |
| 336 | I | A | 0.4749 | |
| 337 | S | A | -0.8239 | |
| 338 | Q | A | -1.4707 | |
| 339 | Q | A | -0.5664 | |
| 340 | L | A | 1.0005 | |
| 341 | C | A | 0.7814 | |
| 342 | T | A | 0.5561 | |
| 343 | P | A | 0.3150 | |
| 344 | L | A | 1.3121 | |
| 345 | P | A | 0.6135 | |
| 346 | N | A | 0.0164 | |
| 347 | V | A | 1.7158 | |
| 348 | Y | A | 1.6013 | |
| 349 | D | A | 0.2005 | |
| 350 | P | A | -0.3380 | |
| 351 | S | A | -0.2766 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.4833 | |
| 354 | K | A | -1.6847 | |
| 355 | N | A | -1.7008 | |
| 356 | Y | A | -0.0791 | |
| 357 | L | A | 0.6390 | |
| 358 | R | A | 0.9422 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3594 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0360 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9138 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6701 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2766 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3411 | |
| 376 | L | A | -1.7852 | |
| 377 | D | A | -2.0510 | |
| 378 | P | A | -0.8846 | |
| 379 | G | A | -0.8766 | |
| 380 | V | A | -0.8864 | |
| 381 | L | A | -0.2336 | |
| 382 | A | A | 0.0094 | |
| 383 | H | A | -0.5612 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -0.3710 | |
| 386 | T | A | -0.0007 | |
| 387 | M | A | -0.1291 | |
| 388 | N | A | -0.6519 | |
| 389 | P | A | -1.0126 | |
| 390 | T | A | -1.4748 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4591 | |
| 393 | E | A | -2.9335 | |
| 394 | N | A | -2.8067 | |
| 395 | W | A | -1.6130 | |
| 396 | N | A | -1.3280 | |
| 397 | L | A | -0.2812 | |
| 398 | G | A | 0.4854 | |
| 399 | F | A | 2.4022 | |
| 400 | V | A | 1.8306 | |
| 401 | P | A | 0.0453 | |
| 402 | P | A | -1.9900 | |
| 403 | K | A | -3.5046 | |
| 404 | E | A | -4.0208 | |
| 405 | R | A | -4.4668 | |
| 406 | E | A | -4.0159 | |
| 407 | D | A | -2.9561 | |
| 408 | P | A | -1.8142 | |
| 409 | Y | A | -0.9810 | |
| 410 | K | A | -2.0976 | |
| 411 | G | A | -0.6275 | |
| 412 | L | A | 0.6805 | |
| 413 | I | A | 1.5989 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3701 | |
| 416 | E | A | -1.6118 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8225 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8751 | |
| 421 | E | A | -2.4825 | |
| 422 | R | A | -2.0339 | |
| 423 | F | A | -1.0132 | |
| 424 | S | A | -1.3173 | |
| 425 | Q | A | -1.8277 | |
| 426 | D | A | -2.8951 | |
| 427 | L | A | -1.9907 | |
| 428 | D | A | -2.7743 | |
| 429 | Q | A | -2.6114 | |
| 430 | F | A | -1.4379 | |
| 431 | A | A | -0.8885 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5440 | |
| 435 | K | A | -0.6883 | |
| 436 | F | A | 0.1723 | |
| 437 | L | A | 1.0509 | |
| 438 | Y | A | 0.8419 | |
| 439 | Q | A | -0.2536 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine